Detailed information of ENSDLIP00000013799.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020911274.1, pre-mRNA-processing factor 40 homolog B isoform X2 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75400Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens OX=9606 GN=PRPF40A PE=1 SV=2
Q9R1C7Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1
Q80W14Pre-mRNA-processing factor 40 homolog B OS=Mus musculus OX=10090 GN=Prpf40b PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004797 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00397
all species →		WWWW domainDomainInterproscan
PF01846
all species →		FFFF domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002713
all species →		DomainFF domainInterproscan
IPR036517
all species →		Homologous_superfamilyFF domain superfamilyInterproscan
IPR036020
all species →		Homologous_superfamilyWW domain superfamilyInterproscan
IPR001202
all species →		DomainWW domainInterproscan
IPR039726
all species →		FamilyPre-mRNA-processing factor Prp40Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11864
all species →		PRE-MRNA-PROCESSING PROTEIN PRP40Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005685
all species →		Cellular ComponentU1 snRNPInterproscan
GO:0045292
all species →		Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0071004
all species →		Cellular ComponentU2-type prespliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDLIP00000013799.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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