Gene detail

Detailed information of ENSDLIP00000014580.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020898055.1, sister chromatid cohesion protein PDS5 homolog A isoform X2 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000016039

ATGGTGAAGGAATCCGGCGCCTCGTCGAAGAAACGAAACGGCGCATCGTCCGAAACAACAACACTAAGCACCAAACTAAGCCATGATGAACTTCTAAAACAACTTAAGGCATTGGCGAAAGAGCTGCAAGGTGCCGAACAGTCCTCAGATGCAAGCTGTTATAATTCGCAAGCAGCGTTTCTTGCCAGTCCTTTTATCATCAAACATAAAGACAAAGATATAAGACTACATGCAGCATTGTGCCTTGTGGATATCCTACGTGTGTATGCACCTGAAGCTCCATATGATAAAGATCAGATGTGGGACATATTTTCTCTCATCATTAGCCAACTGAAAGGACTAGAACATGGACCAAATGAATccaaatataacaaaacattttatatctTAGAGAGCCTTGCGCTGGTGAGAACATTTAACATATGTGCAGATCTTGATTTTCAAGATCTTATTCTCCAGTTATTTAAACTTCTGTTTAATGTAGTAAAtGAGAAGCATACCATCAGAGAACAAACCTTCATGGTAGAAATAATGAGTCCAATATTCCAAGAGAGTGAATCAATATCACAGGAACTACTTGACACTGTGcttatcaatattattgaacCAAAAAAGTCCAGAAACCCTGCTGCATATAAGGTGGCTTGTAATTTGATTCAAAGGACATCTACAAATATTGAACCTTTTATACAAATGttttttaataGTGTCCTTACTCTTGGGAAAACTTCAGAAAGTGATCTAAGTGAGAAAGTCTATGACCTTATTCTAGAATTAAATAGAATCTGTAGTTCTGTCCTTTTGTCTGTTTTACCTCAACTAGAGTTCAAATTAAAGAGTACTGAAGTAGAAGAGCGTTTAACTGTAACTAAGCTACTTGCTCAGATGTTCTCTGATCCTGATTCTGAACTAGCAACAGAAAACAAGCCATTATGGAACTGTTTCCTAGAAAGGTTTCATGATATCAATATTGATCTCCGTGTAGAATGTGTTAGGAGTGCTAAACCTTTTCTCCTTCACCACCCTGAGCTTGCACAGGATATCACAGaTAAACTGAGCAGTCGAGCTAAGGATCCCGATGAAAAAGTACGTCAAGaagttgttgctgttgctttTTCTGCTGCCGCAGAGAATATTAAGTGTTTCTCTAACACGACATTTGAAGAGTTATGTGAAAGAATTCGAGATAAAAAGCTTTCAGTGAGAGTTGAAGCTCTGATGTCGCTAGGAAAACTATACAAGGGTTATGTTACAGGTCCAAATGCGGATCCCCAAGTTGCAAAGAGTCTGTACTGGCTTCCAAGTAAACTACTGAAAGGCTACTATCAGCACTTGGTGGAAGATAGACTCTGTGTAGAGAGAGTTTTATCAGGATGTCTTGTACCTGTCACACTCAAGACAAAAGAGAGAATGAAACTTCTCTTCTCCTTGTACAATAAACTTGATGAACATGCAGTAGAGGCATTCAAGGTTCTTTTAAAGTGTCAAGCAAATGTGAGGGCTGATCTTGCTGCTCTAGTCAGACTATCTCAAAATGAAAAGTCAGAAGAAAATGATGCTCTTATGCTCTCACATGTCATTACACTTGCAAGAGCTCTTCCAGACCCATTCAAGTCACAAGAGAATCTAAAGAAATTACAGACCATGCTACAACAAGAGACCAGGACAAGAGAACTGTTTAAGATTGCTGTTGACGTTGACGCTGGATGCCCTGCAGTATTCAAAGCAGTGGCCGACATTGTTATTCAGCTTGGTGCTCGGAATCCATTATTAGAAACTGTCAAAGCACTTCTAGACAGAGCTGCACCTGTAATGGTTGATAGTGCTGGTATTCaagctatttttgaaatggtCAAAGAGCTCAAAGATGggcttgatgatgatgatgatgatgatgatgatcatgctTACAGATcttctgaaaaacaaaataaaggcATGGAGTTACTTCTGATGCTATCAGAGATTGCTCCATCCAACTTCAGGACTACACAATGCTATGAAACTATTCTTGTGTTTTTAAAACACAATGACCAACAGATAGTGAACTCTGCTCTTCACATCTTGTCAAATGTTGCTGAAGGAATGGAAACAACAGATAAAGATATTGCTTCATACTACCAGCCAGTCTTGACCCAGTTAGCATGTAAAGGAACACCACAGCAAGCCAAATTTGCCATGAAATCCATTGCTAAGATCTTTAAAGATCCAAGTTCTGTCTTTGAAAGAATATTCACAAGTGTTTTGGAGAATCTTGAGTATGACCATCCTTTACTATTGTCTCACCTTACAACACTGGCGCAGATGGCTGTGCTAGCTCCATCTATCTTTGAAACCAGACAGAAGGCTATCATTAAGGACTTTGTTGTTAAAGAGCTGCTTGTCAAGGACAGGAGTACTGTTGAAGACTCAGACTCACAGGGAGATGATGAATGgtgtgatgattgtgatgtaaCAAGAGAGACACAGGCAAAGGTGAAAGGTATTAAGCTAATGATACGATGGCTCCAAGGCTTACGCAGCAACTATCAAAACTCTGTTCTACCTGTATTAAGATTACTAACTACTTTACTATCTAATGGAGGAGACTTGCAAAACAATGGTTGTGTATGctCTCATGATTGCTCTCGCCTACGCTTGGCTGCGTCTTGtggtattttaaaaattgctcAACATCTTCATTATGAGGAAGCAATTTCTTTGGAAAACTTCCAACAACTTGCTCTTATAATGCAGGATGTTTGTGCAGAAGTGAAAGCTACTTTCACAAAGAAACTTCATAAAGCTCTTGATTCCTTGAAGCTCCCACTAGAATATCTAGCAATCTTTGCTCTGGCAGCATCAGAAACAGATAAAGACAAGAAGGCAAAGGTCCGCCAAATGATTACTCGTAATGTTGCAATCAGAAGGGAATACCTAAAGCAACACTCTGCTGCTCAAGCGTGTTCCCATTCTTTACTGCCAGAGTATGCCTTGCCTGCCCTCATCCATTTACTGGCTCATCATCCTGACTTTAAACCTAAAGACCATGAGTCATTGGTGCAGTATAGAGAATATATTTGGTTTTTCATGGAGCCAATTTTATCAAGTAAAACAGAGAACTCAGGCCTTCTTAAAAAGCTAATAGAAACAATAAAACAGACAAAGGATGCACAGAGCCCTGATGATGAAGATGCTAATGAGGCAATGTACACTCTATGTGATCTAACCTACGGACTTATTGTCAGTAAGGCTAGTGGATTAGCAATGGAAGTATTTCCTGGACAACCTCTTTTACCCAAGAAAATGTTCCTGCCTGGCAAAATGGATGTTCCCAATACCAAATCATATCTTCCAGCAGGTTTTGCTTTTCTACCAGGAAAGaaaaatgTGAAAGTTGCTAAAAGTACAACAAACCAGAAAGTTAAAAGTACAGCACAGAAGCAAAATGGAAGTAATATAAAGTCCAATGGACCAAgCAAAGCTGAGAACAACCAGAAAAATGGTTTAACAAAAAGAACTAAAGAAATACAAGAAAGTGACGAAGAATCTGGGCCTTCCACTCCCACTCTTTCTGTCAAACGTAGAGTACTAAATGACGAAAAACCAcagaaaacaacaagaaaGACAGCAAAAGATACTGCAAAACAGACAGCTAATGAGCCTCCTAAACAAACATCCAGACAGAGCAAAAGAACAAGTAAAGAACTAATATTACAGCAAGATCAAGCCAAGCCAAAATCAACCAAGAAAGAAACAGTCAAGAAAGAGTCACTCAAACAAGAGACCCCTAAAAGTCCAGCTCGTACTAGAGCGGGAAAGACTTCTCCTAAGAAGCAGACTTCATCAAACAAACGATCACCATTCAGACCCGATACACAGCCAACCAAGTCGGGTAATGTACCCAAGAGGTTGCGAACAGAGTTAGATGTATCACCTGATGATGACCCGCTAGACAGCCCAGCACCTTTGCCAGCAAGAAAAGGAAGACAGAAAGGAAAGGAGGAGGAATTACCAAAGAAGCAAACACCGAAGAAAAGAGGACGTCAAGCAAAGAATGAAAGCCCCTCAGTGTCGCCCAAGAAGCGAAAGTTGCCATCTGTTAGTCCCACAAAATCACCCAAGGCTTCCCCTGTTAAAAGCAAAACGGCAGCCAAATCACTGAGAAGTACTCCTGTCaaaaaacaatcttcaaaggGTACCCCTGTGAAACGAAAGGCTATAAGCCCTTCTGAAAGCCCAAGAAAATCTCCTAGAGGTAGTCCTGTAAAACGAAATACTGCTGCTTCATCTGCTAGTCCGACAAAATCTCCCAAGAAAGCTGTTCTTGGACAGAAAGCGGGTGCAAAATTATCTAAGAGTACCACTGTCAAACAGAAGGCGACACTAAAATCAACCAAGGGCACTCCCGTTAAACAGAAAGCGAAAGTGAATTCAAAGTCTCCCAAAAGTACCCCTGTAAAGTCCCCGAGGGGTACCCCTATTAAACAGAAAACTACAACCAAATCTCCAAGAGGTACTCCCGTAAAACGAAAAGCAGCTGCTACTACTGCAAGCCCAAGAAAATCTCCTAGGAGTAGCCCAGTCAAAAGAAACACGGCGACttctaacaaacaaaataaaactagtAGTCCATCAAAGGCGACACGGACTGCTCAACCAAGTCCTGctaaaagacaaaaaacagACAGTCCTTCAAAGGCAAAACAGTCTACTTTAAATGTAAAGAGGCGAACTTTAAGAAAGAGATAA

Transcript

ENSDLIT00000016039

ATAGCAGGGTAGTATTATGGTCTGGCCCAGGTTCGCGCCAAAGTTTATTACCTTGTGAATGTTTTGTGAATGTGTGAATGTAGAACTGGTGATCATCAATgatagttttcttttaaacATTGTTCATTATCCACGACTTGATTGGGAACTGCTTGGATGAGATTTTGAAGAAAGACTATTGAAAATGGTGAAGGAATCCGGCGCCTCGTCGAAGAAACGAAACGGCGCATCGTCCGAAACAACAACACTAAGCACCAAACTAAGCCATGATGAACTTCTAAAACAACTTAAGGCATTGGCGAAAGAGCTGCAAGGTGCCGAACAGTCCTCAGATGCAAGCTGTTATAATTCGCAAGCAGCGTTTCTTGCCAGTCCTTTTATCATCAAACATAAAGACAAAGATATAAGACTACATGCAGCATTGTGCCTTGTGGATATCCTACGTGTGTATGCACCTGAAGCTCCATATGATAAAGATCAGATGTGGGACATATTTTCTCTCATCATTAGCCAACTGAAAGGACTAGAACATGGACCAAATGAATccaaatataacaaaacattttatatctTAGAGAGCCTTGCGCTGGTGAGAACATTTAACATATGTGCAGATCTTGATTTTCAAGATCTTATTCTCCAGTTATTTAAACTTCTGTTTAATGTAGTAAAtGAGAAGCATACCATCAGAGAACAAACCTTCATGGTAGAAATAATGAGTCCAATATTCCAAGAGAGTGAATCAATATCACAGGAACTACTTGACACTGTGcttatcaatattattgaacCAAAAAAGTCCAGAAACCCTGCTGCATATAAGGTGGCTTGTAATTTGATTCAAAGGACATCTACAAATATTGAACCTTTTATACAAATGttttttaataGTGTCCTTACTCTTGGGAAAACTTCAGAAAGTGATCTAAGTGAGAAAGTCTATGACCTTATTCTAGAATTAAATAGAATCTGTAGTTCTGTCCTTTTGTCTGTTTTACCTCAACTAGAGTTCAAATTAAAGAGTACTGAAGTAGAAGAGCGTTTAACTGTAACTAAGCTACTTGCTCAGATGTTCTCTGATCCTGATTCTGAACTAGCAACAGAAAACAAGCCATTATGGAACTGTTTCCTAGAAAGGTTTCATGATATCAATATTGATCTCCGTGTAGAATGTGTTAGGAGTGCTAAACCTTTTCTCCTTCACCACCCTGAGCTTGCACAGGATATCACAGaTAAACTGAGCAGTCGAGCTAAGGATCCCGATGAAAAAGTACGTCAAGaagttgttgctgttgctttTTCTGCTGCCGCAGAGAATATTAAGTGTTTCTCTAACACGACATTTGAAGAGTTATGTGAAAGAATTCGAGATAAAAAGCTTTCAGTGAGAGTTGAAGCTCTGATGTCGCTAGGAAAACTATACAAGGGTTATGTTACAGGTCCAAATGCGGATCCCCAAGTTGCAAAGAGTCTGTACTGGCTTCCAAGTAAACTACTGAAAGGCTACTATCAGCACTTGGTGGAAGATAGACTCTGTGTAGAGAGAGTTTTATCAGGATGTCTTGTACCTGTCACACTCAAGACAAAAGAGAGAATGAAACTTCTCTTCTCCTTGTACAATAAACTTGATGAACATGCAGTAGAGGCATTCAAGGTTCTTTTAAAGTGTCAAGCAAATGTGAGGGCTGATCTTGCTGCTCTAGTCAGACTATCTCAAAATGAAAAGTCAGAAGAAAATGATGCTCTTATGCTCTCACATGTCATTACACTTGCAAGAGCTCTTCCAGACCCATTCAAGTCACAAGAGAATCTAAAGAAATTACAGACCATGCTACAACAAGAGACCAGGACAAGAGAACTGTTTAAGATTGCTGTTGACGTTGACGCTGGATGCCCTGCAGTATTCAAAGCAGTGGCCGACATTGTTATTCAGCTTGGTGCTCGGAATCCATTATTAGAAACTGTCAAAGCACTTCTAGACAGAGCTGCACCTGTAATGGTTGATAGTGCTGGTATTCaagctatttttgaaatggtCAAAGAGCTCAAAGATGggcttgatgatgatgatgatgatgatgatgatcatgctTACAGATcttctgaaaaacaaaataaaggcATGGAGTTACTTCTGATGCTATCAGAGATTGCTCCATCCAACTTCAGGACTACACAATGCTATGAAACTATTCTTGTGTTTTTAAAACACAATGACCAACAGATAGTGAACTCTGCTCTTCACATCTTGTCAAATGTTGCTGAAGGAATGGAAACAACAGATAAAGATATTGCTTCATACTACCAGCCAGTCTTGACCCAGTTAGCATGTAAAGGAACACCACAGCAAGCCAAATTTGCCATGAAATCCATTGCTAAGATCTTTAAAGATCCAAGTTCTGTCTTTGAAAGAATATTCACAAGTGTTTTGGAGAATCTTGAGTATGACCATCCTTTACTATTGTCTCACCTTACAACACTGGCGCAGATGGCTGTGCTAGCTCCATCTATCTTTGAAACCAGACAGAAGGCTATCATTAAGGACTTTGTTGTTAAAGAGCTGCTTGTCAAGGACAGGAGTACTGTTGAAGACTCAGACTCACAGGGAGATGATGAATGgtgtgatgattgtgatgtaaCAAGAGAGACACAGGCAAAGGTGAAAGGTATTAAGCTAATGATACGATGGCTCCAAGGCTTACGCAGCAACTATCAAAACTCTGTTCTACCTGTATTAAGATTACTAACTACTTTACTATCTAATGGAGGAGACTTGCAAAACAATGGTTGTGTATGctCTCATGATTGCTCTCGCCTACGCTTGGCTGCGTCTTGtggtattttaaaaattgctcAACATCTTCATTATGAGGAAGCAATTTCTTTGGAAAACTTCCAACAACTTGCTCTTATAATGCAGGATGTTTGTGCAGAAGTGAAAGCTACTTTCACAAAGAAACTTCATAAAGCTCTTGATTCCTTGAAGCTCCCACTAGAATATCTAGCAATCTTTGCTCTGGCAGCATCAGAAACAGATAAAGACAAGAAGGCAAAGGTCCGCCAAATGATTACTCGTAATGTTGCAATCAGAAGGGAATACCTAAAGCAACACTCTGCTGCTCAAGCGTGTTCCCATTCTTTACTGCCAGAGTATGCCTTGCCTGCCCTCATCCATTTACTGGCTCATCATCCTGACTTTAAACCTAAAGACCATGAGTCATTGGTGCAGTATAGAGAATATATTTGGTTTTTCATGGAGCCAATTTTATCAAGTAAAACAGAGAACTCAGGCCTTCTTAAAAAGCTAATAGAAACAATAAAACAGACAAAGGATGCACAGAGCCCTGATGATGAAGATGCTAATGAGGCAATGTACACTCTATGTGATCTAACCTACGGACTTATTGTCAGTAAGGCTAGTGGATTAGCAATGGAAGTATTTCCTGGACAACCTCTTTTACCCAAGAAAATGTTCCTGCCTGGCAAAATGGATGTTCCCAATACCAAATCATATCTTCCAGCAGGTTTTGCTTTTCTACCAGGAAAGaaaaatgTGAAAGTTGCTAAAAGTACAACAAACCAGAAAGTTAAAAGTACAGCACAGAAGCAAAATGGAAGTAATATAAAGTCCAATGGACCAAgCAAAGCTGAGAACAACCAGAAAAATGGTTTAACAAAAAGAACTAAAGAAATACAAGAAAGTGACGAAGAATCTGGGCCTTCCACTCCCACTCTTTCTGTCAAACGTAGAGTACTAAATGACGAAAAACCAcagaaaacaacaagaaaGACAGCAAAAGATACTGCAAAACAGACAGCTAATGAGCCTCCTAAACAAACATCCAGACAGAGCAAAAGAACAAGTAAAGAACTAATATTACAGCAAGATCAAGCCAAGCCAAAATCAACCAAGAAAGAAACAGTCAAGAAAGAGTCACTCAAACAAGAGACCCCTAAAAGTCCAGCTCGTACTAGAGCGGGAAAGACTTCTCCTAAGAAGCAGACTTCATCAAACAAACGATCACCATTCAGACCCGATACACAGCCAACCAAGTCGGGTAATGTACCCAAGAGGTTGCGAACAGAGTTAGATGTATCACCTGATGATGACCCGCTAGACAGCCCAGCACCTTTGCCAGCAAGAAAAGGAAGACAGAAAGGAAAGGAGGAGGAATTACCAAAGAAGCAAACACCGAAGAAAAGAGGACGTCAAGCAAAGAATGAAAGCCCCTCAGTGTCGCCCAAGAAGCGAAAGTTGCCATCTGTTAGTCCCACAAAATCACCCAAGGCTTCCCCTGTTAAAAGCAAAACGGCAGCCAAATCACTGAGAAGTACTCCTGTCaaaaaacaatcttcaaaggGTACCCCTGTGAAACGAAAGGCTATAAGCCCTTCTGAAAGCCCAAGAAAATCTCCTAGAGGTAGTCCTGTAAAACGAAATACTGCTGCTTCATCTGCTAGTCCGACAAAATCTCCCAAGAAAGCTGTTCTTGGACAGAAAGCGGGTGCAAAATTATCTAAGAGTACCACTGTCAAACAGAAGGCGACACTAAAATCAACCAAGGGCACTCCCGTTAAACAGAAAGCGAAAGTGAATTCAAAGTCTCCCAAAAGTACCCCTGTAAAGTCCCCGAGGGGTACCCCTATTAAACAGAAAACTACAACCAAATCTCCAAGAGGTACTCCCGTAAAACGAAAAGCAGCTGCTACTACTGCAAGCCCAAGAAAATCTCCTAGGAGTAGCCCAGTCAAAAGAAACACGGCGACttctaacaaacaaaataaaactagtAGTCCATCAAAGGCGACACGGACTGCTCAACCAAGTCCTGctaaaagacaaaaaacagACAGTCCTTCAAAGGCAAAACAGTCTACTTTAAATGTAAAGAGGCGAACTTTAAGAAAGAGATAACGATAAACCATCCCTGACGACCTCAAGTCCATGTCATCTATAGTGTATATACCACAAGCTAACACCAAAGTAATGGTCAGCGGTCAGCTCAGAATATAAAATGGGGACAGTTGtaattacaatgaaatgacCTTCCATATAGACAATGGTCTAAAAAGTTGTTGAGTTATAAATAGACAACAGAACTCCCCACCCCATCTCCTATTTTTATTAAACTTGACAAGGGAATACAATCTTGCAGAATGTGGTCAGTGAACTAACATCAGATACAAGGCCAATATCAGTTTTTGACAAGTTATCGAAATGGTTGAAATAGAGTCGTTTAAGTATGAGTGAGAAACGTTACgtttacgataccgctacgatacggtagactATTCGAATGTTtccttagaaactacggctacgatacgatacagtactgtttcccactcatacgaaaacgtcTCTATTTGTATGAATGCGTGCTATATGCATTGTGTAATTTACTACatattttgtgtttcaattttttaaatcttaaCACTTTTCCTACATAAAGATACATTTACCGAACGTCGCGGCAGTTTCATTTGGGCCTGAATGTTAGGTACAAAAGAAATAgagaaaatattgtaaacacACTTATAAacactttttatttcaacGTGATACTCAGATTATTTGtgattcattttgttttatattagAGTTCATGTTATTGACAATGAATCATGTCTTGGCCTTTATTTTGGCTTTTTTTTTATCCCTCGATTCAGTTTAAGACAACTGTAAGTACCACGAgacatattttaattatttcaatactttttaatTATATCATGTCTCGTATTTCGCAAATGGTTTTTGTAATAAACTGACATTAAACATTGGCGAAGGCTGTAGTtagag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F3U9	Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus OX=9031 GN=PDS5B PE=2 SV=3
Q498H0	Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis OX=8355 GN=pds5b-a PE=1 SV=1
Q5U241	Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis OX=8355 GN=pds5b-b PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003756 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20168 all species →	PDS5	Sister chromatid cohesion protein PDS5 protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039776 all species →	Family	Sister chromatid cohesion protein Pds5	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12663 all species →	ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000785 all species →	Cellular Component	chromatin	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0007064 all species →	Biological Process	mitotic sister chromatid cohesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11267	PDS5; sister chromatid cohesion protein PDS5	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.