Gene detail

Detailed information of ENSDLIP00000014585.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020911179.1, TOX high mobility group box family member 3 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q03435	Non-histone protein 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NHP10 PE=1 SV=1
P07746	High mobility group-T protein OS=Oncorhynchus mykiss OX=8022 PE=2 SV=2
Q9YH06	High mobility group protein B1 OS=Gallus gallus OX=9031 GN=HMGB1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008289 (this species only)
Transcription factor family	HMG · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050342 all species →	Family	High Mobility Group Box (HMGB)	Interproscan
IPR009071 all species →	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112 all species →	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008301 all species →	Molecular Function	DNA binding, bending	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11680	NHP10; non-histone protein 10	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.