Gene detail

Detailed information of ENSDLIP00000014894.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020909985.1, squamous cell carcinoma antigen recognized by T-cells 3 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000016362

ataataataatttgttttgttttcaaggaTTCTAAATTGAAGATATCATCCGTCATTCTGCCAGCTTATGAACGTGCTCTACAAAACTGCCCCTGGGTTTCAGTATTATGGCAAAACTACATGAGGGCTTTAGTATGTATACActtcaaacattttaataaGAGAATTAATAcgaaaaaAAACCCTTGACAAAGCATTGACATGTGGTTTTGCTGACCCACAAGATTATCTGCAGTTATGGCATTGTTACTGTTCATACTTACGAAGACAGGTACAAGAATGGACACAAGGCCTTTAAAATGAACAGTATAGATGAAGCTCAGAAACTGTGGGAAAAAGTCATGTCTGGCCATGGACGAGAGCTTGAATACTGGTTGGAATATTCTAACTTGGCCAGGTCATGTTGTGAGTTACCAATATGTCGTAAAATACTACAGAGAGCAGTTCAGTCAGCCAGTGATAATCCTGAAGGGGCTGCACAAGCTTTGTTGAGCTTTGAAGATGAAGAAGgTACTTTAGATGATTGGGATGCTTCATTTACACGCTGTCATACTAGATTGACAATAACTAATCAAAGAAGAGCAAAgGCAGCTGAAAAAGAAGCAGCAAAAGCAGAAGAGAAAGCCAATGCAGAGAAAGCAGCAacagagaaaagaaaacagaccAAAGTTGCTAAGCAACAAGcaaaaaagcaagaaaaacggcaacaaaaacaacagcaaaaacaactCCCCAAAAAGCCAGAACATCAGCAGCaatcacaacaacaacagcagccgCAGTCACAACTTAAAAGAAAGGTGCAAGAGGTGACGTTCGTTGAACCTGTTGCAAAGAAACCACATGTTGAGAACGTAAAAGGTGACCAGGAAACACATGAACTCTCCCTGCAGCCTGACGAGCATGACAAGTTGAAATACGATAGATCGGCTGATCATCGTAAAATCTTCGTTAGTAATTTACTGTATAAAGTAAATGAAGAACAGCTCAAAGAAAGATTTACCAAGCTTGGTGAGGTAGTCGATGTCCGAATTGTCCGTAACAAGGAAGGTCGTTCCAAAGGATATGCATACATAGAATTCAAAGATGAGAGTCCCGTACCAGCAGCTCTTGCTCTTGACAGGAGTAATATGGATGGAAGACCGATGTTCATATCACCTTGTATTGATAAGTCAAAAAACCCCACCACATTTAAGTTTCCCACGTCGTTGGACAAAAAGACGCTGTTCGTTTCCAATCTACCGTTCACTATTAAAGAATCAGAAGTGCGAGACATCTTTGCCAAGTTTGGCGAGGTCCAGCAAGTCCGTCTGGTTAGTAACAAGGCTGGGAAACCCAAGGGTTATGGATATGTCGAGTTTGTTGACGAGCATTGTGCGTCTAAAGCAGTTGTTGGCCTCGATGGTACAACAGTCAATGACAGAGCAATCTCAGTTGCTCTATCCAATCCTCCTACACGAAAATCCAATCGATCAGAGGTGGTACCTCTCCCTCTCATCTCGACTGGAAGGCGTTCAAAGACCCAAGTTGCTTTAGTACCACGCGCCTTACAGAAAAAGACAACCACCACCACTTCGACGACAACAGAGAAAAAGACAGAGGAGGACGAGGAGAAAACAGTCGATGAAGAACAGCCAAAAAAGGGTTTTAGTAACGATTACTTTAGCAAGCTCATGCAGAAGTAAATGTTAGTTTTTAGGTAAAAGACTTTTATATAGAACATATGTGATCAAAGTGATCAAAGTATGTAACGTTCTGTTGATCTAGAAACCGGTGGCACCATTGTCAACGCCAACTTACGACTGAAGGATTGAAATAATACAGGTTTACATTTACACTATTTCAACCGACTTTGCCCCAGTGCCTTTTTTAAACTCCGGCAAGTGGAATTGTATGTTGATCCGAAATATAAGTACACCATCACTGTTACAGGTGAAAAacgatttcaaaaatattaaattgtgTATGTATATAATTACATGGAGTGTAGAAATGATATGTATTTCGTTCAGAAAAAATAGAACTGCATTGCTATACCTCGACCATCGATGGATGGGTCTATAGCGAGATGACGTTTCACCAACAAAAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JLI8	Spliceosome associated factor 3, U4/U6 recycling protein OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1
Q15020	Spliceosome associated factor 3, U4/U6 recycling protein OS=Homo sapiens OX=9606 GN=SART3 PE=1 SV=1
Q5REG1	Spliceosome associated factor 3, U4/U6 recycling protein OS=Pongo abelii OX=9601 GN=SART3 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003669 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034217 all species →	Domain	SART3, RNA recognition motif 1	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15481 all species →	RIBONUCLEIC ACID BINDING PROTEIN S1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0061574 all species →	Cellular Component	ASAP complex	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000014894.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.