Gene detail

Detailed information of ENSDLIP00000015644.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020905193.1, probable hydrolase PNKD [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000017136

AGCGGACAACTTCatgaattcaaaatggcgtccaAGACGAAAAAGCTGGAtgtgttttgatgttttaacATGTGATGTATGGCTTAGTGGCGGTCGTTTTCGCCGCTTTTGTTGGGTATCGAGTACTGAAATATGTCCCTATGAATTCACTGTTATTTCGTATTGGaTACACACTTTATTCTAAGACTTCCCTTGGCTATTACTACCATACACATCAGTTAGACAAGTACAAGACCACACATGATCAGCCACACTCTATTGTTACTCCTTGGTGTTCATCAGGTGTAAAAGTGATCCCAATTCCTTTCTCTAATGATAATTACAGCTATTTGGTTATTGATACAGAACAAAACCATGCTGTAGTGGTCGATCCATCTGATCCTGTTGCTGTCAAGGAAGTATTAGCCAAGGAACAAGTCCAACTGAAAGCTATCTTGACCACACACAAACACTgGGATCATAGTGGAGGTAACAGCACTCTACAAGCTGATTTCCCAGGGATTTCCATATATGGTAGTGCTAGTGATGATATCCCTTCTCTTACACAtcccCTAAAGCCTAATGACACGCTGAAGTTTGGATCCCTGAAGTTTACAGCACTTTTCACACCAGGACACACAATAGGTCATATGGTGTATGTTCTTGATGGCCAGCCATTTTGTGCTCCTGATTCACTGTTCTCAGGGGATTTGCTGTTTCTTGGAGGATGTGGTCGGATATTTGAAGGAGAGGCAGCTGAGATGCTGGGATCACTTCAAAGTGTTGCTATCTTAAAGGAGAATACATTGTTATGGCCAGGTCATGAATATGCAGCCAAGAATCTTCTATTTGACCTCACAATTGAGCCTGATAATCCTTACATTCAAAACAAGCTAGACTGGGTACTACAGCAAAGGGCTAATAAACGGGCCACATGCCCTTCAACCATTggtgaagaaaaacaatacaatCCATTCCTGCGAACACACATCTATGAAGTCATGTCTGCAGTTGGAATTGATGCAGTACCTGAACAAAATGCTAACTTACAGTCAGTGGCTGTTCTGGTTGCCCTGAGACAACGTAAAGATAACTTCAAGTAGAAGAATATATTAAGCATGTGGATTTGGCAGTCATTGGTGCGGTTGGGCTGGAGGTTCATTTGTGCACCACAATTTTGATTTAACTGgagaataataatattatagtCTTTTAAATTGACTAAATAGGTTTTGTCTAAGTCAACAAAGGTTGCTGGCTCCCTTCATGTTTCATTGTCAGAGATAAagaaacattatttattttttataaggtatttttagaatttgctttgtttatttatggaGCAGTCTGCATAATACTGATCTGCAAGTGCAACATTAATGGCTGTAAATtgtattacaaatatttttttattacaaacagaaaaagttttttttttaactatcaAGACTGGAATTTTAGGTAAATGACatccatttcatttcaattcgTCCAGATTtctatatttaaaaaactgtGAAGGAAGGACTGCACCACCTCAACTTATCATgttatagttattttttatactttcAATGTTTATGTTAACTTATTTAAaagtatttctttttttagggAAAACTGCATTGTAGtcttatatttttacaaacgGACTATAAGCCaggatttattttaatttttttaaagtttacaCCTGTACAAATTGTTATTAtgttaaatagtgctatttgatgcaaattctattgttttcttttgtttaattagtgctattcactactaaatagtgacaattgttgcacacttttagtgggTGCACTCTTCTCCTGCTGCAATTATTAATTAGTGCTTTTAAAAGctatttaagaaaaaaacttgtaATTTGTAACTTTCTTTGTTGACATAATAATTAACATAAATTGTTACATTATTGGCCCAGGGTGAAAAGGAGAAGCTAAAATTGTAACAAAACGTAGTAGAAAAAGGGAGGTATTTATCCAAAAGCTATGTAGTAAAATTCAAACTTATCAAAGAAGAGTGTTgtgttatttcattaatttattttacaatctacttcaaaatcaattgtttaaaaatgtaCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q69ZP3	Probable thioesterase PNKD OS=Mus musculus OX=10090 GN=Pnkd PE=1 SV=2
A7YY46	Probable thioesterase PNKD OS=Bos taurus OX=9913 GN=PNKD PE=2 SV=1
Q8N490	Probable thioesterase PNKD OS=Homo sapiens OX=9606 GN=PNKD PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004231 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16123 all species →	HAGH_C	Hydroxyacylglutathione hydrolase C-terminus	Family	Interproscan
PF00753 all species →	Lactamase_B	Metallo-beta-lactamase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035680 all species →	Domain	Hydroxyacylglutathione hydrolase, MBL domain	Interproscan
IPR032282 all species →	Domain	Hydroxyacylglutathione hydrolase, C-terminal domain	Interproscan
IPR017782 all species →	Family	Hydroxyacylglutathione hydrolase	Interproscan
IPR036866 all species →	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan
IPR001279 all species →	Domain	Metallo-beta-lactamase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11935 all species →	BETA LACTAMASE DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004416 all species →	Molecular Function	hydroxyacylglutathione hydrolase activity	Interproscan
GO:0019243 all species →	Biological Process	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23864	PNKD; paroxysmal nonkinesiogenic dyskinesia protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.