Gene detail

Detailed information of ENSDLIP00000016238.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020914914.1, putative Polycomb group protein ASXL2 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

ENSDLIT00000017822

ATGACACACAAGGAGATCCTGAAGGTTATTCAAGATGAAAAACTTCGGGATGTAAGCCGTGGTAATTCCTCGCTTGCTTGTTTGAATGCTATGCTACATCAACATTCACGTGGTCCAGATGCACTCTTCTACAAGGTAGATGGAAGAACAAGCTGCTACGGAATGAATcaAAGAAAGATTGAAAATGCTTCAGATTCTTTATCAGTGAAACCTAGTGAGTCCCAAGACACTGCTTCTACCGCTGATATCACGCCTCCACCCGCTGTGCCTCCCCTTCCTCCTATGATGTCATCTTCTTCACCTAGTGCTAGTAGTGTCTCTAACCAGCAATCTATGGAGTTGTCTGACTCTGAGCCATCTTCACCTCCTGCTGTATTTGACCTTCTCTCTGATACAACAGCTACAAACAATGTCATACAGCAAGAAGAGTGCCCAGAACCAGTCAATGTTGTTGAAGTCCCAGACATTCAAAGAGAAGAGACGCTAACATGCGTTTCACCCACAGAAAAGGACAGTACTGCATTTCTCCCTAAAGCTACTGTTAATGGAACAAATATAACAAATCCTGCCCCAAAGAGACCAAGACCATCATCTAAAAGTTctaaaaaggaaaagaagaaaccAAGTGAATCAAAGTCCAGCAAGCAACCACCAGCAAAAAAAGCCAGGCCTAACAGTACCAGACCAAGACCAGTAGCTAAAAATGTCTTAAAGAATTTGAAGGTTGGAACTGTTGGGGAGATGTCGGAAAGTCAAACCATAGGTGATAGCAAgCTAAAGAAGCTTGTCAATTCTGGACTTGGGGAGTCACACCTTAATGGAGAAGCTCATGGAACACCACAGATTGCAGCAGCAAGAAACATGGTGAAATTCTCTGGTCTCCACACTAAAAAGCAAAGACGATATAAAAAGATGAGTGTTGCTGATCAGATCAAAAGAACGAAAGAGGGACGGGTGGATTTGCAGTCACCAGAGTCTATACTTGCAAGTGTACCATTAAGGAGTCTATTAAACAACAGAACATTTCACCTTCTTCCACCTGCCTATCAATACCAGCTGCTTATGTTACTGCCTAAAGTTGACCGTGTTGTTGGTCAAGATGGAGGACTAAGACCATCTCCTATGGCATTCACTAATGAGTTCTTTACAAGTACATGCCATTTGTGGAGAGATCGACTAAAAGACGGTGAATTCACACCTGAGACGCAACAAAAACTCAAATTGGAAGATgaaaaattgacaaagatAGATCCCTGGAAGGCAAAATACTTTGAACCTGTTTGGGGACAAAAgtCTTTGTCAAGATTAGATAATGACATGCTGCCACTCTTCCCAGGCCTCACTCCAGAATCTGACAACAGTGATAATATTGCACAGTTCTGGCAGCCACCGAGCCTTATAGATCGCAGTCTTACAAACACTAGTTATACTCAATCAGAGACTATATCTCCACAAATCACACCTGAACAGTTAAACAGCACATTCTTACCTCAACTGACAGTTCCAATTAGGAAACTGTCTATGAAAGGTGATAACCAGAAGCAAAAACGTGTCAGTGCACTTCATCGTTCCGAAGCTGCCAAGTCAATAAGTAGCAAAGCTAAGTCTAAGATCAGTGCTGTTAGTACTGTACTGACTATTGAGGAGATAAACAATGCTTTATCAGTTTTACGGACTTCTGAACCAGAGGATATCCCCTCAGTTGTAAAACTTTTAACACGAAAGAAAGTTCTTAAGTTACCTGCTGCAGAGCCTAAAAAATCTCTCAGCAAATCAAcctcaaaatcaaaacacaaaaacaatccTACTATGCCAAtgtcaaaacaaacagaaGATATCAATCCAGCTTTAACGCTAAATTCACTCAGCATTCCTGCATTAAACCAACAAGTAAACAGTGCAACTGCAAATATTCCTAAAGATTTGTATACTTCAAAAAGCGAAGTGGCAAGTCGGCCTCTCACGAGCTTATTGCCTAGCAATGCAAAGACAGTTAGTGGAATTAATAATGCTATACTGGCCAAGAGTTGTGTATGTCGCTTAAAGGCAATGAAAGTCTGTCGAATGTGTGGAGCTTTCTGTCATGATGACTGCATCACTGCTGCACAGTTGTGTAGTATGTGTGTCAGTTGA

Transcript

ENSDLIT00000017822

CGTGAGTTTTTCGCCTGACAGATGTGTAGAATGGAGTGTATATTGATCAGTTTAAAAAGGTTGTGGTGGAACATATATCGGGGGTCTGGGAGTGTAGCAGTGTGACCAACCAATAGAATTACAGCATGATTTAACTGTCATTTCGACATATCATGGACATGAGCGCATGCTTGCTTGACAGCAAGAATTTGATATAGGAGTGAGTTCGTAATGGCAGCAGGTTTTGGAACGGTCCAGTTGTCCTATGACACACAAGGAGATCCTGAAGGTTATTCAAGATGAAAAACTTCGGGATGTAAGCCGTGGTAATTCCTCGCTTGCTTGTTTGAATGCTATGCTACATCAACATTCACGTGGTCCAGATGCACTCTTCTACAAGGTAGATGGAAGAACAAGCTGCTACGGAATGAATcaAAGAAAGATTGAAAATGCTTCAGATTCTTTATCAGTGAAACCTAGTGAGTCCCAAGACACTGCTTCTACCGCTGATATCACGCCTCCACCCGCTGTGCCTCCCCTTCCTCCTATGATGTCATCTTCTTCACCTAGTGCTAGTAGTGTCTCTAACCAGCAATCTATGGAGTTGTCTGACTCTGAGCCATCTTCACCTCCTGCTGTATTTGACCTTCTCTCTGATACAACAGCTACAAACAATGTCATACAGCAAGAAGAGTGCCCAGAACCAGTCAATGTTGTTGAAGTCCCAGACATTCAAAGAGAAGAGACGCTAACATGCGTTTCACCCACAGAAAAGGACAGTACTGCATTTCTCCCTAAAGCTACTGTTAATGGAACAAATATAACAAATCCTGCCCCAAAGAGACCAAGACCATCATCTAAAAGTTctaaaaaggaaaagaagaaaccAAGTGAATCAAAGTCCAGCAAGCAACCACCAGCAAAAAAAGCCAGGCCTAACAGTACCAGACCAAGACCAGTAGCTAAAAATGTCTTAAAGAATTTGAAGGTTGGAACTGTTGGGGAGATGTCGGAAAGTCAAACCATAGGTGATAGCAAgCTAAAGAAGCTTGTCAATTCTGGACTTGGGGAGTCACACCTTAATGGAGAAGCTCATGGAACACCACAGATTGCAGCAGCAAGAAACATGGTGAAATTCTCTGGTCTCCACACTAAAAAGCAAAGACGATATAAAAAGATGAGTGTTGCTGATCAGATCAAAAGAACGAAAGAGGGACGGGTGGATTTGCAGTCACCAGAGTCTATACTTGCAAGTGTACCATTAAGGAGTCTATTAAACAACAGAACATTTCACCTTCTTCCACCTGCCTATCAATACCAGCTGCTTATGTTACTGCCTAAAGTTGACCGTGTTGTTGGTCAAGATGGAGGACTAAGACCATCTCCTATGGCATTCACTAATGAGTTCTTTACAAGTACATGCCATTTGTGGAGAGATCGACTAAAAGACGGTGAATTCACACCTGAGACGCAACAAAAACTCAAATTGGAAGATgaaaaattgacaaagatAGATCCCTGGAAGGCAAAATACTTTGAACCTGTTTGGGGACAAAAgtCTTTGTCAAGATTAGATAATGACATGCTGCCACTCTTCCCAGGCCTCACTCCAGAATCTGACAACAGTGATAATATTGCACAGTTCTGGCAGCCACCGAGCCTTATAGATCGCAGTCTTACAAACACTAGTTATACTCAATCAGAGACTATATCTCCACAAATCACACCTGAACAGTTAAACAGCACATTCTTACCTCAACTGACAGTTCCAATTAGGAAACTGTCTATGAAAGGTGATAACCAGAAGCAAAAACGTGTCAGTGCACTTCATCGTTCCGAAGCTGCCAAGTCAATAAGTAGCAAAGCTAAGTCTAAGATCAGTGCTGTTAGTACTGTACTGACTATTGAGGAGATAAACAATGCTTTATCAGTTTTACGGACTTCTGAACCAGAGGATATCCCCTCAGTTGTAAAACTTTTAACACGAAAGAAAGTTCTTAAGTTACCTGCTGCAGAGCCTAAAAAATCTCTCAGCAAATCAAcctcaaaatcaaaacacaaaaacaatccTACTATGCCAAtgtcaaaacaaacagaaGATATCAATCCAGCTTTAACGCTAAATTCACTCAGCATTCCTGCATTAAACCAACAAGTAAACAGTGCAACTGCAAATATTCCTAAAGATTTGTATACTTCAAAAAGCGAAGTGGCAAGTCGGCCTCTCACGAGCTTATTGCCTAGCAATGCAAAGACAGTTAGTGGAATTAATAATGCTATACTGGCCAAGAGTTGTGTATGTCGCTTAAAGGCAATGAAAGTCTGTCGAATGTGTGGAGCTTTCTGTCATGATGACTGCATCACTGCTGCACAGTTGTGTAGTATGTGTGTCAGTTGAACAATTATCGTTTTCATGGAGATGTTTACACCAATTTCTTTCCTGCAAGTGGATGGATTACTTGTGGATGATATGCAATTCATTATGCAAGTTTTAGTATCTAGTaagaaaattcaataaattgacAGGGATAAGTCTGAAAGTCTTTAGCAACTGTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9V727	Polycomb group protein Asx OS=Drosophila melanogaster OX=7227 GN=Asx PE=1 SV=1
Q76L83	Putative Polycomb group protein ASXL2 OS=Homo sapiens OX=9606 GN=ASXL2 PE=1 SV=1
Q5ZM88	Putative Polycomb group protein ASXL2 OS=Gallus gallus OX=9031 GN=ASXL2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005609 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13922 all species →	PHD_3	PHD domain of transcriptional enhancer, Asx	Domain	Interproscan
PF05066 all species →	HARE-HTH	HB1, ASXL, restriction endonuclease HTH domain	Family	Interproscan
PF13919 all species →	ASXH	Asx homology domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044867 all species →	Domain	DEUBAD domain	Interproscan
IPR007759 all species →	Domain	ASXL, HARE-HTH domain	Interproscan
IPR026905 all species →	Domain	Protein ASX-like, PHD domain	Interproscan
IPR024811 all species →	Family	Polycomb protein ASX/ASX-like	Interproscan
IPR028020 all species →	Domain	ASX, DEUBAD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13578 all species →	ADDITIONAL SEX COMBS LIKE PROTEIN ASXL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0009887 all species →	Biological Process	animal organ morphogenesis	Interproscan
GO:0035517 all species →	Cellular Component	PR-DUB complex	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11471	ASXL; additional sex combs-like protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.