Gene detail

Detailed information of ENSDLIP00000016808.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: KXJ26524.1, Sorting nexin-25 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000018485

ATGAGGCTTTTGTTGAGAGAAATATTAACATATTCGGTATTTCAGCCGTTGGCAGAAATGATCTGTGATCCAGATTATATCAACCAGACCTTGTTAATTCATTTAGAAGCAAAGGAAGCCCTTACTGCCAAGCACAAGCCAAGATATGCTTATGCTGAGACTTATGAAGATTTTATTCGAATGATCAATACTTGCAATTCTGTGGAAACTTTGAAACAAATGAGATACCACATTATTGCTGAAATCATGCAAGCTACAACTATCAATAACTTAAAAGGAATAGAAAAAGTGAGTCAAAAAGAGAATGAACCACTGAAGAAAGATTCACAGCTGAGGTCCAGAAACTTGAAGAGATACATCAACCAGTGTACTGTAGCGAAAGCACAATGTGAAAAGAGAATTAAGTTACTAGGTGGGCCAGACTATACATCCCATAATGCTAATGAACAACCCCAAGCAACTGGAGGACATGAAAAGATCAAACCAGTTCAGAAACAAACAAGTCAAGGGTCAAAAGTACTTAGCTTCACAGAAATAATGGACAACAGTCTGGCAAGAAGCTTCTTTATGtcgtatttacaaaataacacCAACAGTAAAAACATGTTAAGTTTTTGGATGGCAATTGAAAACCTTAAGCTAGTCAAGGCAGCAGAGATCATTAAAAGTACACAAGAAATCTATCAAGTGTATGTTGCACCATCATCTGATAAATCCATCATGTTAGACACCTCACTGGTTAGGGATATGGAAGGATTTCTTAATGGAACTAAAGAAATACAGTGCTTCTTTGATGCACAGTGGAAAGTCTACAAACATCTCGAGGAGAGATTCTATAGGAGGTTTGTTTTAAGTCAAGAGTACTTCATGCTTGTTTGTCAGTTAGAAGCTGAAATGGATGATTGGAGAGCATATCAAAAAGATgacaaagaagaagaacatCTACATGTTGACTTGAACTGGATTGATCAAGTTGGCTCTACAGATGAAGAGgaTGCTGGAAATCAGGAATGGGCTCCCAGATCAGTGCGGAAACCAAGTACTGTTGAAGAGAGAAGTGAttctattgaaaaaaaactacaactGCTGGATCAGAGACTTGCTGCAAAGACACATCAAATGGAGTTAATGAGAAGAAGCTATGGCTTGGAGTCAGATGAAATGGATACAATTGAGCAGGAAATACAGGCTTTGATCACAGAAAGAAGACACCTTGAATTCCATATTGAAAGAACAGATGTTTGGTGTGAAAACATTGGAAAATGGAAAGTATTGATTGAAACTGTGGAGtgGTGTCAAGAAGAAGACAAGTCTATCCCAGTGTATGTAATTGTGGTTCATTGTTCACAATCTGATGCGCCGACTCCACCAACCACACCATCAGGTTCAATCCCTGAAAGCCATGAAGGTGCTACATCAGAGGGCTGGGTAGTTACCAGGAAGTTCAAAGATTTCCAGACATTGCATACTAAACTCAAAGAGTGTTCCCCAAATTTAACGAAGGAACTGCCAGCACCTACCAAGAAATGGTACAAGTCAATGGATGATGAATTTCTGAACAAAAGTAGAATAGCTCTTCAAGAATACTTGCAGaGTCTCCTTGCTGATGATAAGCTATGCTTGAGTGAAGAATTGTACTCTTTTCTAAGTCCAAGCCCTGAGCATTTACGAAAACAGAGTGAACCAGCAAAAAAGTCAACTGGATTTTCATTGGTATCTGTGTTGAAGAGtctTCCTTTTGACATCATCCCAAATGATGATCAGGTTGAAGAGATACAAGAAATAATCATTGACCAAGAGGACAGTTCTCTGCCAAAAGACTCCATTGCTGAACCATTTTATGCTTTGATTGGAGAAGTTTTTGAACTTAAAGGAGTATTCAAATGGCTGAGAAGGACACTTATTGCATTTGTGCAAGTCACATTTGGTGGTACAATCAACAAGGAAATCCGTGAGATGGTTGAATGGTTAGCATCTGAGTCTATGATTGTCTACTATGTGCATATGTTTAGAGATTCTATGTGGCCTGGTGGTGTTCTGGCTAAACCATTACCAAACAGAACAGCTGAGGAAAAACTGGACACCAAGATAAAAGCAAAGAAATTGCTTTTGAAAGACATTCCAGAGGTGTTGCAGAGCCTTGTTGGGAAGAAGAACAGTAAACTCGGCACTATCAAGgtctttgaagcttttcaagacaaaagagtaaacaaacatttgttttatGTGATGTTGGAGCTGTGTGTTCTAACACTATGTCCAGAAGTCAAATCAGATACAATCATAGATAAAGCcaaggaaatgaaaaaagacaGGCTTACTAAAAGGCATCTTGGTCAGGAATAG

Transcript

ENSDLIT00000018485

AATAGATCACATACGAAAAGCTTGTGAAGTGCTGCTCCACTGTCTTCTTCCACAACAAAACGCAAACTGTTCTGGTATGAGGCTTTTGTTGAGAGAAATATTAACATATTCGGTATTTCAGCCGTTGGCAGAAATGATCTGTGATCCAGATTATATCAACCAGACCTTGTTAATTCATTTAGAAGCAAAGGAAGCCCTTACTGCCAAGCACAAGCCAAGATATGCTTATGCTGAGACTTATGAAGATTTTATTCGAATGATCAATACTTGCAATTCTGTGGAAACTTTGAAACAAATGAGATACCACATTATTGCTGAAATCATGCAAGCTACAACTATCAATAACTTAAAAGGAATAGAAAAAGTGAGTCAAAAAGAGAATGAACCACTGAAGAAAGATTCACAGCTGAGGTCCAGAAACTTGAAGAGATACATCAACCAGTGTACTGTAGCGAAAGCACAATGTGAAAAGAGAATTAAGTTACTAGGTGGGCCAGACTATACATCCCATAATGCTAATGAACAACCCCAAGCAACTGGAGGACATGAAAAGATCAAACCAGTTCAGAAACAAACAAGTCAAGGGTCAAAAGTACTTAGCTTCACAGAAATAATGGACAACAGTCTGGCAAGAAGCTTCTTTATGtcgtatttacaaaataacacCAACAGTAAAAACATGTTAAGTTTTTGGATGGCAATTGAAAACCTTAAGCTAGTCAAGGCAGCAGAGATCATTAAAAGTACACAAGAAATCTATCAAGTGTATGTTGCACCATCATCTGATAAATCCATCATGTTAGACACCTCACTGGTTAGGGATATGGAAGGATTTCTTAATGGAACTAAAGAAATACAGTGCTTCTTTGATGCACAGTGGAAAGTCTACAAACATCTCGAGGAGAGATTCTATAGGAGGTTTGTTTTAAGTCAAGAGTACTTCATGCTTGTTTGTCAGTTAGAAGCTGAAATGGATGATTGGAGAGCATATCAAAAAGATgacaaagaagaagaacatCTACATGTTGACTTGAACTGGATTGATCAAGTTGGCTCTACAGATGAAGAGgaTGCTGGAAATCAGGAATGGGCTCCCAGATCAGTGCGGAAACCAAGTACTGTTGAAGAGAGAAGTGAttctattgaaaaaaaactacaactGCTGGATCAGAGACTTGCTGCAAAGACACATCAAATGGAGTTAATGAGAAGAAGCTATGGCTTGGAGTCAGATGAAATGGATACAATTGAGCAGGAAATACAGGCTTTGATCACAGAAAGAAGACACCTTGAATTCCATATTGAAAGAACAGATGTTTGGTGTGAAAACATTGGAAAATGGAAAGTATTGATTGAAACTGTGGAGtgGTGTCAAGAAGAAGACAAGTCTATCCCAGTGTATGTAATTGTGGTTCATTGTTCACAATCTGATGCGCCGACTCCACCAACCACACCATCAGGTTCAATCCCTGAAAGCCATGAAGGTGCTACATCAGAGGGCTGGGTAGTTACCAGGAAGTTCAAAGATTTCCAGACATTGCATACTAAACTCAAAGAGTGTTCCCCAAATTTAACGAAGGAACTGCCAGCACCTACCAAGAAATGGTACAAGTCAATGGATGATGAATTTCTGAACAAAAGTAGAATAGCTCTTCAAGAATACTTGCAGaGTCTCCTTGCTGATGATAAGCTATGCTTGAGTGAAGAATTGTACTCTTTTCTAAGTCCAAGCCCTGAGCATTTACGAAAACAGAGTGAACCAGCAAAAAAGTCAACTGGATTTTCATTGGTATCTGTGTTGAAGAGtctTCCTTTTGACATCATCCCAAATGATGATCAGGTTGAAGAGATACAAGAAATAATCATTGACCAAGAGGACAGTTCTCTGCCAAAAGACTCCATTGCTGAACCATTTTATGCTTTGATTGGAGAAGTTTTTGAACTTAAAGGAGTATTCAAATGGCTGAGAAGGACACTTATTGCATTTGTGCAAGTCACATTTGGTGGTACAATCAACAAGGAAATCCGTGAGATGGTTGAATGGTTAGCATCTGAGTCTATGATTGTCTACTATGTGCATATGTTTAGAGATTCTATGTGGCCTGGTGGTGTTCTGGCTAAACCATTACCAAACAGAACAGCTGAGGAAAAACTGGACACCAAGATAAAAGCAAAGAAATTGCTTTTGAAAGACATTCCAGAGGTGTTGCAGAGCCTTGTTGGGAAGAAGAACAGTAAACTCGGCACTATCAAGgtctttgaagcttttcaagacaaaagagtaaacaaacatttgttttatGTGATGTTGGAGCTGTGTGTTCTAACACTATGTCCAGAAGTCAAATCAGATACAATCATAGATAAAGCcaaggaaatgaaaaaagacaGGCTTACTAAAAGGCATCTTGGTCAGGAATAGagtataaaattattatacatACCTATAGGTTCTGAATGGTACACTTTCCAAAAGCTGGTCAGTTCAATTGGAATGATCGATTTTATACATTCATCAACACAAAGGTGTACCATTCACCATcccaaaaaaattgtaaaaaactAATATACcattacaaaattatcaaaggtctataattataataatatttactagtatgatacattttcaaaattttaaattatttaatactTTCATTGGTAGAGTGCACTTACTATAACTGTACAACAAATATACTATTAAATAgtgatattttatgctaatactattgttttcttttgtataattagtgctatttaccctaaatagtgacaactgttgcacacttttagtgtgtgcactctattttaCCAAATTCTTCCAAAATTCATATACATTTAGATGATTGTATACATATTGCCGAGAGGTTATAGATCTGGCAgaaaattttctttatttacattttcagTATTTGCAAGTTAATTATGAAATTATATTGTACTACCACTGTTTCTGCAGGGCAATGAAGTGAAGGGACTATGAAGTATCTACAAAATGTCTCGGCACTATTAAAATAAACTCTGCTCAAATGtagtagagtgcatgcactaaagtgtgcaacagctgtcactatttagtggtaaatagcagtaattattgaaaacaatagaattagcatagaatagcagtatttaatggtatttatattgcacacttttagtgcgtgcactagagtgcacacactaaaagtgtgcaacataaataccactaaatagtgctattttatgcttattctattgttttcttttgtttaattagtgctatttactactaaatagtgacaactgctgcacacttttag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H3E2	Sorting nexin-25 OS=Homo sapiens OX=9606 GN=SNX25 PE=1 SV=2
Q3ZT31	Sorting nexin-25 OS=Mus musculus OX=10090 GN=Snx25 PE=1 SV=3
Q6P4T1	Sorting nexin-19 OS=Mus musculus OX=10090 GN=Snx19 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003630 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787 all species →	PX	PX domain	Domain	Interproscan
PF08628 all species →	Nexin_C	Sorting nexin C terminal	Family	Interproscan
PF00615 all species →	RGS	Regulator of G protein signaling domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR037899 all species →	Domain	SNX25, PX domain	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR003114 all species →	Domain	Phox-associated domain	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR013937 all species →	Domain	Sorting nexin, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22775 all species →	SORTING NEXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000016808.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.