Gene detail

Detailed information of ENSDLIP00000017016.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020902757.1, uncharacterized protein LOC110241235 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000018693

ATGGTTGGGGGACGATTGACCTGTCTATTCGGGTGCATCTTATTGTTAGGCTTTGCCAAGGCTCTTCCCCGAAAGGTTTACACAGTAACCGTCAAAACCAGTGAGGACATTGACGCTGGGGCTGACCCTAAAGATAAAGtgtttatcaaattatttggTGATAAACATATTACTGATTATAAAATACTGAAAGGGGATGACAACGCCTTCCAGAGAAATACGGTGACCATGTTTGAGATCAACGCACAAGACGTTGGTAAAATACAAAGCTTTTCTATCAAGAAAACAGCTCAGGGTAAAGCCGACAAATGGAACCTCCAAAAGGTCTCTGTAGAAGACAAAGAAGGTGATGTATACGAAGCCATGTGTAAGTGCTGGCTCTCAAAGGAACAAGGCTTAGAGAGAACACTCGTCCCAACAAATGTCCACAAGAAAAGCATGCTAAACGATCCAGTAATGACTACCTCATCGCCGACCGGATCACCAGTTCCAGGATCGTCTACTCCAACAAAAAGTGCTTCTACAACATCGTCAGCGACTGGCAACAAAGACAAGTCATCTGACAGCAACGAAATCACAATGGTGCCAACATTGTCAGCTGGAGATATACTAGGACTCGAAGCTGACGCTCCCACTGCCAAACCAGCAAGTGGCAATCCATCGCCACCAACACCAGCAGAAGACATAGCAGGACTTATCCTCTTCCACATCAATAATCTTCGTCTTCTCCATGGAACTGGTCCTGTGATCCTCGAAAAAAACATGTCCACCATAGCTGCGCAAGTTGCTAAGAAGCTTACAGCCACGAATGGCACCGAGGTCGAACATGATTATGGAGTCAATGTATGTTCGTATAACGATACAGCACAACAAGCTTCAGCTGCTGCTCAAGATTGTGTTAAAAGGTGGTACGAAACGGTGAAAAACTTTGATTGGTCAAGTTCTGTAGTCAAACCGGAAAACTCCGAGTTTGCCCAACTAATATGGAAGGATACGACCCATGTTGGTATCTCGAGTAGTGTCCAACAAGGCAAGGAGAGCTTTATAGTGGTTTTGTTTGATCCACGATATGATTCCACATATGCAGCAAAGGAAAACATCTCTCCAGTTAAAGATGTAAGCGATGGAACTTCCCAAGAGTGCACTCCACCATTCAGTTTATATGAGCGTTCCTGCTATGCCTATCTGGATACTCCCCTAAAATGGGATGCAGCTATTGCAGAATGTGCCAAATATGGCGCCTCTTTAGCTTCCATTGACAGTCAAAATACAAACACTTATTTGAGTGGACTTGTAGCAGGTAAAAGAAACATCACCGAACTTTCATCAGAAGCTTGGATTGGTTTCACTGATCGTCTTCAGGAAAGTCGCTACCAATGGACTGACGGTAGTGCCGTCACGTTCTACCATTTTCTTCCTAATGAGCCAACAGGGCAGGGAGAGAACTGCGTTGCCATGATGAGCTCAAGTAATGCGTCTGGGTGGGTAGACAAGAAGTGTAGCGAGCAGTTGCCGGCCATTTGTAAAATGCCAATACAAGCTCCAATCTCATACAAAATCACTGTACTTATCGAGAAAGACGAAGAACCAGCACAAGTGCAGCAACCATACTACAATAATGCCGGTTATACGGGATATATGGGAGGTTATTCTGCCGGATACCCGAGTTATAACACTGGTTATGGCTATCAATACGGCAAAAAGAAGTCTGGCATACCAAAAGTCAAGAATCCATTAAAGCATAAACATACACATGGACATAAGAGATCGTTCGTACCGGGATTAACTGACTACGTCGCACTTATCAAGAAAAGAATGAATGACTTGGAAAAGAAACCTTGGAATTTTATTGGCGATTCATCAATGATTGGCTCCGATGGTGGTTACTATGTTAGTGTTTATCTAAAACAGCCATTCCCTGTACAACCAAGCCCCGCTCAAGCACTACAAACCTATTTGGAAAATAACAAGAACCATCTCGCGCCTAACAATACCGCTAATGCCACTGTGGCTTGTGTCAGCATCGTTTGTCCAGgAAGTGGATGCATAACCCAGTGTAGCACCACATGCTCAAGCCAATGTGGCTCAACATGTTGTTCGGGAGCCACTGTCATCAATCCACAACCTGTTCACTCAGCAGCACcagcacaggcagcccaataCCCAGCTCCAGCTCCATACCCTAGCCCTTACCCATACCCTTATCCTTCACCCTACCCATACCCCTATCCATCACAGTATGGGGAGCAAGGATGTGTCCGATCCTGTTCCAAAAAGGCAACAAGGTCCTTCTGCCCAGCTTACTGTCCAAAGAACTGTTGTAAGAACAAATACTGA

Transcript

ENSDLIT00000018693

aacgattttttttcctaggaaaaaaaataaagtggGAGGAACCGTGGGCACCTGTCAATGTTATGAATAAATTTATGAAATTGCGTCTAAAATCTCCACTCTggtcaaaatatttacaaggTATAAGCTTGTAAACTTGTCTCTTTCGAGTGAAAATATAACACTCGACACTTGTTTACTGTTTTGAAATTACTGTACAGAATTAGAGTAAACAGCATCTGTTTAGAAAGCAGGACTAAGAGAGGCTCAAGATGGTTGGGGGACGATTGACCTGTCTATTCGGGTGCATCTTATTGTTAGGCTTTGCCAAGGCTCTTCCCCGAAAGGTTTACACAGTAACCGTCAAAACCAGTGAGGACATTGACGCTGGGGCTGACCCTAAAGATAAAGtgtttatcaaattatttggTGATAAACATATTACTGATTATAAAATACTGAAAGGGGATGACAACGCCTTCCAGAGAAATACGGTGACCATGTTTGAGATCAACGCACAAGACGTTGGTAAAATACAAAGCTTTTCTATCAAGAAAACAGCTCAGGGTAAAGCCGACAAATGGAACCTCCAAAAGGTCTCTGTAGAAGACAAAGAAGGTGATGTATACGAAGCCATGTGTAAGTGCTGGCTCTCAAAGGAACAAGGCTTAGAGAGAACACTCGTCCCAACAAATGTCCACAAGAAAAGCATGCTAAACGATCCAGTAATGACTACCTCATCGCCGACCGGATCACCAGTTCCAGGATCGTCTACTCCAACAAAAAGTGCTTCTACAACATCGTCAGCGACTGGCAACAAAGACAAGTCATCTGACAGCAACGAAATCACAATGGTGCCAACATTGTCAGCTGGAGATATACTAGGACTCGAAGCTGACGCTCCCACTGCCAAACCAGCAAGTGGCAATCCATCGCCACCAACACCAGCAGAAGACATAGCAGGACTTATCCTCTTCCACATCAATAATCTTCGTCTTCTCCATGGAACTGGTCCTGTGATCCTCGAAAAAAACATGTCCACCATAGCTGCGCAAGTTGCTAAGAAGCTTACAGCCACGAATGGCACCGAGGTCGAACATGATTATGGAGTCAATGTATGTTCGTATAACGATACAGCACAACAAGCTTCAGCTGCTGCTCAAGATTGTGTTAAAAGGTGGTACGAAACGGTGAAAAACTTTGATTGGTCAAGTTCTGTAGTCAAACCGGAAAACTCCGAGTTTGCCCAACTAATATGGAAGGATACGACCCATGTTGGTATCTCGAGTAGTGTCCAACAAGGCAAGGAGAGCTTTATAGTGGTTTTGTTTGATCCACGATATGATTCCACATATGCAGCAAAGGAAAACATCTCTCCAGTTAAAGATGTAAGCGATGGAACTTCCCAAGAGTGCACTCCACCATTCAGTTTATATGAGCGTTCCTGCTATGCCTATCTGGATACTCCCCTAAAATGGGATGCAGCTATTGCAGAATGTGCCAAATATGGCGCCTCTTTAGCTTCCATTGACAGTCAAAATACAAACACTTATTTGAGTGGACTTGTAGCAGGTAAAAGAAACATCACCGAACTTTCATCAGAAGCTTGGATTGGTTTCACTGATCGTCTTCAGGAAAGTCGCTACCAATGGACTGACGGTAGTGCCGTCACGTTCTACCATTTTCTTCCTAATGAGCCAACAGGGCAGGGAGAGAACTGCGTTGCCATGATGAGCTCAAGTAATGCGTCTGGGTGGGTAGACAAGAAGTGTAGCGAGCAGTTGCCGGCCATTTGTAAAATGCCAATACAAGCTCCAATCTCATACAAAATCACTGTACTTATCGAGAAAGACGAAGAACCAGCACAAGTGCAGCAACCATACTACAATAATGCCGGTTATACGGGATATATGGGAGGTTATTCTGCCGGATACCCGAGTTATAACACTGGTTATGGCTATCAATACGGCAAAAAGAAGTCTGGCATACCAAAAGTCAAGAATCCATTAAAGCATAAACATACACATGGACATAAGAGATCGTTCGTACCGGGATTAACTGACTACGTCGCACTTATCAAGAAAAGAATGAATGACTTGGAAAAGAAACCTTGGAATTTTATTGGCGATTCATCAATGATTGGCTCCGATGGTGGTTACTATGTTAGTGTTTATCTAAAACAGCCATTCCCTGTACAACCAAGCCCCGCTCAAGCACTACAAACCTATTTGGAAAATAACAAGAACCATCTCGCGCCTAACAATACCGCTAATGCCACTGTGGCTTGTGTCAGCATCGTTTGTCCAGgAAGTGGATGCATAACCCAGTGTAGCACCACATGCTCAAGCCAATGTGGCTCAACATGTTGTTCGGGAGCCACTGTCATCAATCCACAACCTGTTCACTCAGCAGCACcagcacaggcagcccaataCCCAGCTCCAGCTCCATACCCTAGCCCTTACCCATACCCTTATCCTTCACCCTACCCATACCCCTATCCATCACAGTATGGGGAGCAAGGATGTGTCCGATCCTGTTCCAAAAAGGCAACAAGGTCCTTCTGCCCAGCTTACTGTCCAAAGAACTGTTGTAAGAACAAATACTGAAGGGGGCATTTTGTTAGCAGCTCTAGCCAGGTTGATGACTTGGGAGAGTTCCCGTCTAATTAGTGAAAACCTAAGAGAACATTGGAAGCTTTGATCATTGTTTTCTAGGATATGCATATTCATTTCAAGAATATTGGTTCGACAACAAGCAAAATAGatattcagtatttttgtGAATAGAAATACGATATGTATTTTCCGATTTCTAGAAGAGTTAACAATAATTTGAATACGACAATTCAAATCGAATGGTATTCTGAgttcaaattttaaatttctgcatcagaaaatatatattcaactttaaacaatttttgcaccgagaaaagaaaatatctatTCTATGAATATCGTCGTTTTGAAACTATATGCAAAAATATAATCAGCAAAATGTGGTCTTATATCAAAAGTTAAGAATTGGGGAAAATGTGTGTAATTGTAATTGTGAATAGTGCCTTCAACTACTTGGAACGGTTGAGAGATGcctggatagtgctatccatgGGATAAATCCTTATCTATAATGGATCAATTCTAGACGAATCTATGCGTGGTCACCTCTATCCATGCTTTGTGAAATCTGCCCATAATACTTGGGCGATAATTcgttaatataaataatcGTACTTATTTTAATGAGATTAAAGTGTAATCACCATGAGAGAAGAATTAAGAGAAAATATCACATGACTATGGTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ERB4	Versican core protein (Fragments) OS=Rattus norvegicus OX=10116 GN=Vcan PE=2 SV=2
Q62059	Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2
B3EWZ8	Ectin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007647 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00188 all species →	CAP	Cysteine-rich secretory protein family	Domain	Interproscan
PF01477 all species →	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF00059 all species →	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014044 all species →	Domain	CAP domain	Interproscan
IPR035940 all species →	Homologous_superfamily	CAP superfamily	Interproscan
IPR001304 all species →	Domain	C-type lectin-like	Interproscan
IPR001024 all species →	Domain	PLAT/LH2 domain	Interproscan
IPR018378 all species →	Conserved_site	C-type lectin, conserved site	Interproscan
IPR050801 all species →	Family	Calcium-Dependent Lectins in Immunity and Development	Interproscan
IPR016186 all species →	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR036392 all species →	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22801 all species →	LITHOSTATHINE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000017016.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.