Detailed information of ENSDLIP00000017808.1 in Diadumene lineata

Genomic Location: chr2:10909678...10914965
NR annotation: XP_031552111.1, roundabout homolog 1-like isoform X1 [Actinia tenebrosa]
Species Diadumene lineata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P47970Neuronal pentraxin-2 OS=Cavia porcellus OX=10141 GN=NPTX2 PE=1 SV=1
P47972Neuronal pentraxin-2 OS=Homo sapiens OX=9606 GN=NPTX2 PE=1 SV=2
O70340Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000012 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR051360
all species →		FamilyNeuronal Pentraxin and RelatedInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR030476
all species →		Conserved_sitePentaxin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277
all species →		PENTRAXINInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for ENSDLIP00000017808.1 in Diadumene lineata.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDLIP00000017808.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP