Genomic Location: chr2:5899583...5903252
NR annotation: XP_020902185.1, acyl-coenzyme A thioesterase 13 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families
| CDS |
| ENSDLIT00000020215 |
| Transcript |
| ENSDLIT00000020215 |
| Protein |
| ENSDLIP00000018414.1 |
| UniProt accession | Description |
|---|---|
| Q9NPJ3 | Acyl-coenzyme A thioesterase 13 OS=Homo sapiens OX=9606 GN=ACOT13 PE=1 SV=1 |
| Q5R833 | Acyl-coenzyme A thioesterase 13 OS=Pongo abelii OX=9601 GN=ACOT13 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005339 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03061 all species → | 4HBT | Thioesterase superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006683 all species → | Domain | Thioesterase domain | Interproscan |
| IPR003736 all species → | Domain | Phenylacetic acid degradation-related domain | Interproscan |
| IPR029069 all species → | Homologous_superfamily | HotDog domain superfamily | Interproscan |
| IPR039298 all species → | Family | Acyl-coenzyme A thioesterase 13 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21660 all species → | THIOESTERASE SUPERFAMILY MEMBER-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0047617 all species → | Molecular Function | fatty acyl-CoA hydrolase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17362 | ACOT13; acyl-coenzyme A thioesterase 13 | EC:3.1.2.- | Lipid biosynthesis proteins | ko01004 | deepkoala |
Genes whose expression across the transcriptome samples of Diadumene lineata tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Diadumene lineata, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
