Gene detail

Detailed information of ENSDLIP00000019601.1 in Diadumene lineata

Genomic Location: :...
NR annotation: XP_020896077.1, S-phase kinase-associated protein 2-like [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDLIT00000021673

caacaaacaaatatggCGGCAAATTATTCTCGAACACAAGATCGCCATAAAAGAACTCGGAAACTAGTGGAATCCAAGAAAAAAGACGATAAGAAAACACAGAATGGTACTAAATATACCTGGAATCTGAATGAATCAGAAACTGAGAACGTTTACGAAGAGCTTGACGTCTCCATGTTAAAATGGCCAGACGAGAGTGTTAGAGATTCAAGTCAGGAGTTTAACCAAGAAATACCTAGCAAAACGAGCTCAAAATTTCTCAGACAGAAGATAGCAGCAAGCTCGCCAGGCCGTGCGAAAAAAGTCAAGCCAGTGAGAACATGTGATATTTGTCCTGATAGACGACATGATGTGTGCACTGCGACTGAAGATGAAAATAAACACgaTCATTTTACAAAGCTGTCAGATGAAATTATTTTAGtgatttttaagtttttatcCCGACATACTTTATCAATTTGTGCGCAAGTTTGTAAGAACTGGCAAATACTAGCTTATGATGAAAGTCTATGGAAGGGTGTTGATATGACAAAAGCTAAGATTGGTCCTGGTGTCCTTGGTACTGTTTTATTAAGAGGAACCAAAATTTTGAGAATAGCCATGTCAAAGGTCTGTTCTCCCATCTTTGATGACAGCTTAACTATTTTCCCTGATGTTGTTCCAGTAACTCAGAAACCTTGTGATTGTCTTCTTAAACTAACTCATCTTGATGCTACTCTGTGCTCATTTGAAGATGACAGTCTACTCTGTTTGTTAATGCATTCCAAAAGACTCAAATGTCTCAGTTTAGATTCTTGTTCTCTTTCATTAAGTATTTTAAGGGCCATAGCTGATTGTGAGGATCTTGAAGTATTAAATCTATCAATGTGTAGTGGAATATCAACTCAAGGAATTAAAGCATTAGTTGCTGGCTGTACAAAgcttacaaaattaaatcttGCATGGACTAATCTGAGTACGGCCTCATTACTGCAGGTCATAGAGAATTGCACAAAACTTACACATTTAAATCTGAGTGGATGTCGTGAGGGGCTAACAGATGACGttatagctcagttggtagaacATTGTAAGCAGCTTACCCATCTAGACATAAGCGATGCAGTGCAGTTGACAGCAACATCAATTGCTGCCATTTCAAAAAACCTCCGTTTATGCAATCTGTCAATCAGTAGATGTTACAACATACCACCACAAGCATTCAGATTGTGTGCAGAGATGAAAACCCTATCCAAACTTGACATCTTTGGTCTTCTTAATGACGATGGACTTGAACTGCTGAGACCAGATCTCCCTAATATCACTCTGAATAGTTCTTTCTTCTCTGCCATTGCTCGACCAGTAAGTTACAAATACCATGGAGCCATATGGGGACTTAACTGTTTTAAATgataaacacaaaataaagCCTGTGTACAACCATTCCTACCCCTACCCCTGCAGGGAAAATTTGTGGATGAATTTTACCTGCAGGGGAGGGGAGATGTGCAAACAGATCTATACAGGCtacaaatataattattgatagACAACTCCACAGTTATCAAACCAGAACGTCAAATCTGAGAGTTTGTTGGTCAGGTGCTTTCAGTCAGACAcagaaaacaggaaaaataatattttaagatgttgaaaagttaaaaaaattatgacaTGATGTGACAGAGATGAAAGATCTCAGATAAGTTCAGTGTTTCAAGCTCTCTAATGGTCGTATAatcttgtctttttttctgttccaCTGAAAACATGCAATCCATGTAAGTCAGCCGGAAAACTTATTTTATAAATCTTTTAgaacatttttacattcaaataTTATAAAGTAATGCAGTACATTTTGAGTTGAAACTTTTCTTTCCATAGACAAACTGCCTTTTATTagaattttacttttttagagAGATTATTTTATCAAGTCGTTACATAGAATTATGTAATTCAGTGctagaaataataaatatgaaacaaaatatttgtaaatacaaGTTGACAACCAGT

Protein

Uniprot

Gene family

Uniprot term	Description
Q9Z0Z3	S-phase kinase-associated protein 2 OS=Mus musculus OX=10090 GN=Skp2 PE=1 SV=1
Q13309	S-phase kinase-associated protein 2 OS=Homo sapiens OX=9606 GN=SKP2 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050648	Family	F-box/Leucine-rich repeat	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03875	SKP2, FBXL1; F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)	-	Ubiquitin system	ko04121	deepkoala