Gene detail

Detailed information of ENSDLIP00000021380.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_028517926.1, LOW QUALITY PROTEIN: cytoplasmic dynein 1 heavy chain 1-like [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000023647

atggCCGAGGTAGAGGCAGTATCAGAACAATACAGGCCTCTTTCACACTACTGTAGCAGCATCTACTTTACCCTGGAAGCATTGCATCTGGTTCATTTTCTGTACCAGTACAGTTTGAAGTTCTTCCTGGATATCTTCCAGTGTATACTGTATGATAACCCACACCTTAAGAACATCAAAGACCCTGCATCTCGTCTTAAAGTTCTTACAACTGACCTCTTCCAGATTGTCTACAACAGAGTGGCACGTGGTATGATGCACAATGACCGTATGACTTTTGCCATCCTACTCTGCCGCATCTTCCTAAGAGGACATCCTAGTGAGAAAGAGTTTGAAGAAGAGTTCAACATGTTTATGCGTGGAGATGAAGCAATCCCATCCTCTAGGCCACAACAATTCCAAGGGTTCACTGTAGAACAGGCATCTGCCTTGATTAGACTTACTCAGATGGATTCTTTCAAGAACATGCAAACTTACATCAACTCTAACAGAAAGGAGTTCTTTGAATGGATGGAGAATATCACTCCTGAAATGGATGTGCCAACATGCTGGGATGCTTCAACCAATCtaaCCCCAACAGGTAAAGCTGTCCATCAACTATTGGTCATTCAAGCTCTACGTCCTGACCGTGTCATTGCCATGCTACATCAAGTTGTGAATGTTATCTTTGGGGAGTCCTTCATGCATGATGCCGAGCAATCACTTGATCTTGCAACTGTTGTTGAGAAAGAGATCAAGGCGTCAACTCCATTGCTATTGTGCTCAGTGATTGGTTATGATGCCAGTGGTTGGGTAGATGATCTTGCAGCTGAACAAAACCAGCCATGTTCTTCTATTGCTATTGGTTCTGCAGAAGGATTTAGTGAAGCAGAAAAAGCCATCAATTCTGCTGTCAAGTCTGGCCGatGGGTTCTGCTAAAGAATGTCCATCTAGCTCCACAATGGCTTGTGACACTGGAAAAGAAACTGCACACCCTCAGCCCTCATGCTAACTTCAGACTCTTTATGACAATGGAAATCAATCCTAAAGTCCCAGTCAACCTACTGCGTGCATCACGAATCTTTGTCTTTGAGCCTCCACCAGGTGTTAAAGCTAACTTGTTGAGGACATTCAGCGCTGTGCCTGCTTCGCGCATGTGTCAGGCACCAAGTGAGAGAGCCCGCCTGTACTTCTTACTGGCCTGGTTACATGCTATTGTACAAGAACGTCTACGTTATACACCGCTGGGATGGTCTAAACACTATGAATTCACTGAATCAGATCTGAAAGTAGGGTTTGATACTCTGGACACTTGGTTGGACTCTGTTGCTCAgGGTCGTCAAAATCTTCCTCCCAATAAGATCCCATGGGATGCTTTGAGAGCCTTGATGTCATCAGCTATCTATGGTGGACGTATTGACAATGATTTTGATCAGCGTTTGCTGACAACGTTTGTCAACAGACTGTTCATTGTCAATAGCTTTGAGTCTGACTTCCCTCTCATTATTGATGTTGACGGCAAGGGAAAGAACATAATCATGCCTGAAGGAATAAGACGAGAGCAGTTTGTTCAGTGGGTAGAGAAACTTCCTGACATTCAGACCCCATCATGGCTTGGACTGCCAAACAATGCTGAGAAACTTCTTCTGACTCATCGAGGACAGGACCTGATTGCTAAACTCCTCAAGATGCAGCTTctaagtgatgatgatgagctGGCATACTCTCCTGATGCAGCTAGACCAGCCGATCTGTTTGACGTTCGTACATCATTAAACATGGGTGACATGGACGAGCAAAAGAGAAGAGAGAGTGATCCAAGACCACAATGGATGAGAACACTACATGCTACTGCTGGTAACTGGCTAGGCATGATACCAAAGATCCTGAACCCACTCAAGAGAACCATGGACAACATTAAAGATCCTTTGTTCAGGTACTTTGAGAGGGAAGTCAACACAGGCATTGCCTTGCTTAACACTGTCAGACAGAACCTTTATGACACCATCCTGGTCTGTGAAGCACAGAAGAAACCTACAAACTACCTAAGAAATCTCATGAGTGATCTGGTTAAGGGTATACTACCACGTGAATGGCGGCGATACACTGTACCCAAGGGACTTACTGTCCTGCAGTGGGTTGTGGATTTCAGTGCTCGTATCAAACAACTCCAGACTGTCTCCCAAGCTGCTAATTCAGGTGGAGCTAAAGGACTGAAGAACCTTCATATCTGGCTTGGTGGTATGTTTGTACCAGAGGCTTACATCACAGCTACACGTCAATATGTTGCACAAGCTAATAACTGGTCACTGGAAGAACTCGCTCTAGAGGTGACTATTGCCAATGGTCCTGATGATAAACTAAAGATGGATGACTGCAGCTTTGGAGTCACAGGTCTGAAGTTACAAGGATCTAAATGCTATAATAACCAGCTAGAGCTAGCAAGTTCTATCTCTACTGATTTACCACTGACAAGCCTGAAGTGGAACAGAGTACCTTCTGGACAAGCTACTATGGCTCCAAATATGgTAACCCTCCCAGTCTATCTGAACCAAACCAGGACTGAATTGCTCTTCACCCTCAACATGAACACCAAGGGAGAACCCTCAGGGCGTGGCCACAGGTTCTACGAGAGGGGTGTGGCCTTCCTTGCCTCATCTCTTAGTGGCTAA

Transcript

ENSDLIT00000023647

tattttaaattaaccaTTAACAGATCATGTTTGGGCAAGCTCTAGATCTATGCTGGGAAATTGtttgacagttcagaaaagacacatatcaaaacaaatttggctgtaaacaACTCTATCTTTTTTCGTCTCAGCATCATTGCCACACTGGAGAAACTGAAGCAAGAAGCAGCAGAAATCACCAGAAAGGTTGAAgaaacagatgtgattatggCCGAGGTAGAGGCAGTATCAGAACAATACAGGCCTCTTTCACACTACTGTAGCAGCATCTACTTTACCCTGGAAGCATTGCATCTGGTTCATTTTCTGTACCAGTACAGTTTGAAGTTCTTCCTGGATATCTTCCAGTGTATACTGTATGATAACCCACACCTTAAGAACATCAAAGACCCTGCATCTCGTCTTAAAGTTCTTACAACTGACCTCTTCCAGATTGTCTACAACAGAGTGGCACGTGGTATGATGCACAATGACCGTATGACTTTTGCCATCCTACTCTGCCGCATCTTCCTAAGAGGACATCCTAGTGAGAAAGAGTTTGAAGAAGAGTTCAACATGTTTATGCGTGGAGATGAAGCAATCCCATCCTCTAGGCCACAACAATTCCAAGGGTTCACTGTAGAACAGGCATCTGCCTTGATTAGACTTACTCAGATGGATTCTTTCAAGAACATGCAAACTTACATCAACTCTAACAGAAAGGAGTTCTTTGAATGGATGGAGAATATCACTCCTGAAATGGATGTGCCAACATGCTGGGATGCTTCAACCAATCtaaCCCCAACAGGTAAAGCTGTCCATCAACTATTGGTCATTCAAGCTCTACGTCCTGACCGTGTCATTGCCATGCTACATCAAGTTGTGAATGTTATCTTTGGGGAGTCCTTCATGCATGATGCCGAGCAATCACTTGATCTTGCAACTGTTGTTGAGAAAGAGATCAAGGCGTCAACTCCATTGCTATTGTGCTCAGTGATTGGTTATGATGCCAGTGGTTGGGTAGATGATCTTGCAGCTGAACAAAACCAGCCATGTTCTTCTATTGCTATTGGTTCTGCAGAAGGATTTAGTGAAGCAGAAAAAGCCATCAATTCTGCTGTCAAGTCTGGCCGatGGGTTCTGCTAAAGAATGTCCATCTAGCTCCACAATGGCTTGTGACACTGGAAAAGAAACTGCACACCCTCAGCCCTCATGCTAACTTCAGACTCTTTATGACAATGGAAATCAATCCTAAAGTCCCAGTCAACCTACTGCGTGCATCACGAATCTTTGTCTTTGAGCCTCCACCAGGTGTTAAAGCTAACTTGTTGAGGACATTCAGCGCTGTGCCTGCTTCGCGCATGTGTCAGGCACCAAGTGAGAGAGCCCGCCTGTACTTCTTACTGGCCTGGTTACATGCTATTGTACAAGAACGTCTACGTTATACACCGCTGGGATGGTCTAAACACTATGAATTCACTGAATCAGATCTGAAAGTAGGGTTTGATACTCTGGACACTTGGTTGGACTCTGTTGCTCAgGGTCGTCAAAATCTTCCTCCCAATAAGATCCCATGGGATGCTTTGAGAGCCTTGATGTCATCAGCTATCTATGGTGGACGTATTGACAATGATTTTGATCAGCGTTTGCTGACAACGTTTGTCAACAGACTGTTCATTGTCAATAGCTTTGAGTCTGACTTCCCTCTCATTATTGATGTTGACGGCAAGGGAAAGAACATAATCATGCCTGAAGGAATAAGACGAGAGCAGTTTGTTCAGTGGGTAGAGAAACTTCCTGACATTCAGACCCCATCATGGCTTGGACTGCCAAACAATGCTGAGAAACTTCTTCTGACTCATCGAGGACAGGACCTGATTGCTAAACTCCTCAAGATGCAGCTTctaagtgatgatgatgagctGGCATACTCTCCTGATGCAGCTAGACCAGCCGATCTGTTTGACGTTCGTACATCATTAAACATGGGTGACATGGACGAGCAAAAGAGAAGAGAGAGTGATCCAAGACCACAATGGATGAGAACACTACATGCTACTGCTGGTAACTGGCTAGGCATGATACCAAAGATCCTGAACCCACTCAAGAGAACCATGGACAACATTAAAGATCCTTTGTTCAGGTACTTTGAGAGGGAAGTCAACACAGGCATTGCCTTGCTTAACACTGTCAGACAGAACCTTTATGACACCATCCTGGTCTGTGAAGCACAGAAGAAACCTACAAACTACCTAAGAAATCTCATGAGTGATCTGGTTAAGGGTATACTACCACGTGAATGGCGGCGATACACTGTACCCAAGGGACTTACTGTCCTGCAGTGGGTTGTGGATTTCAGTGCTCGTATCAAACAACTCCAGACTGTCTCCCAAGCTGCTAATTCAGGTGGAGCTAAAGGACTGAAGAACCTTCATATCTGGCTTGGTGGTATGTTTGTACCAGAGGCTTACATCACAGCTACACGTCAATATGTTGCACAAGCTAATAACTGGTCACTGGAAGAACTCGCTCTAGAGGTGACTATTGCCAATGGTCCTGATGATAAACTAAAGATGGATGACTGCAGCTTTGGAGTCACAGGTCTGAAGTTACAAGGATCTAAATGCTATAATAACCAGCTAGAGCTAGCAAGTTCTATCTCTACTGATTTACCACTGACAAGCCTGAAGTGGAACAGAGTACCTTCTGGACAAGCTACTATGGCTCCAAATATGgTAACCCTCCCAGTCTATCTGAACCAAACCAGGACTGAATTGCTCTTCACCCTCAACATGAACACCAAGGGAGAACCCTCAGGGCGTGGCCACAGGTTCTACGAGAGGGGTGTGGCCTTCCTTGCCTCATCTCTTAGTGGCTAATGCAATTAATACTGGAGAACAAATAATAGTGAACACTTGTGTGTCAATTAATATGTAATGTTTGAATGTAGTAAATAAGAATAATCTCACTAGCTAGCAGACATAGGATATTGCATGGGCAGTATGTTTATAAGTATTGCTAGTAAGATCAACTTTGAAAGTTGTGCTCACATAACTAAAGAATGGTATAAGCTAGTTAGACACTAATCATAAAAATCTGACAAAACTTTGTCATTGTTGTCTCTGAATTGTAACCTTCAAATCTTGTATCTTTAACCTTGTTATCAATAATTGTAGCCAGTATAAAATGGGAATAAAATGCTACACCACCTTATTCATGTCTGATTTAATTTAGCCAACTGTCAGTTAGattgcaaacaatatatccctgaaacacttcTTACTAAATAggacaaaatagtgctaattaaacaaaagaaatcaatagaATTTGAATAACATAgcttactaaagttt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JHU4	Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2
P38650	Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1
Q14204	Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC1H1 PE=1 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002054 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03028 all species →	Dynein_heavy	Dynein heavy chain region D6 P-loop domain	Domain	Interproscan
PF18198 all species →	AAA_lid_11	Dynein heavy chain AAA lid domain	Domain	Interproscan
PF18199 all species →	Dynein_C	Dynein heavy chain C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004273 all species →	Domain	Dynein heavy chain region D6 P-loop domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR042219 all species →	Homologous_superfamily	Dynein heavy chain AAA lid domain superfamily	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR041658 all species →	Domain	Dynein heavy chain AAA lid domain	Interproscan
IPR041228 all species →	Domain	Dynein heavy chain, C-terminal domain	Interproscan
IPR043160 all species →	Homologous_superfamily	Dynein heavy chain, C-terminal domain, barrel region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10676 all species →	DYNEIN HEAVY CHAIN FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008569 all species →	Molecular Function	minus-end-directed microtubule motor activity	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0005868 all species →	Cellular Component	cytoplasmic dynein complex	Interproscan
GO:0005881 all species →	Cellular Component	cytoplasmic microtubule	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0007097 all species →	Biological Process	nuclear migration	Interproscan
GO:0008090 all species →	Biological Process	retrograde axonal transport	Interproscan
GO:0031122 all species →	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000021380.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.