Gene detail

Detailed information of ENSDLIP00000021875.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020892959.1, acyl-CoA synthetase short-chain family member 3, mitochondrial [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000024193

ATGCATCGAGCGGTTGGATTTCTACGTTATCGTCTTCCACATCTTAGATCAACTGCTGCAAATGCGATCAAAGTGCAATGCCGATCGTTGTATGTTTCTTGCTCAAAATTGTCTGTGACAAGGCAGTACACTTACGATGAAGCATTTCGGAGCTCGCTTGAAAATAGAGAGACTTTCTGGGCCGAAGTGGCGGAGGGGATCGATTGGTATAAGCCTTACAGTAAAGTCATGGATAATTCAAATCCTCCATTTACGAAATGGTTCCCTGGTGGAGAGCTAAATACCTGTTATAACTGCTTAGATAGGCACATTGAAAAGGGCAAGGGGATGCACACAGCACTTATCTATGACAGTCCAGTATCTGGCAAGATAGAGATGTATTCTTACCATAACCTGCAGAGACTGGTTGCTAAGTTTGCTGGTGCACTTAAAAGTCTGAATGTTGTTAAAGGGGATCGTGTTGTTATCTACATGCCGATGGTCCCTCAGGCTGTGATTGCAATGTTAGCTTGTGCAAGAATTGGTGCCGTCCATTCTGTTGTCTTTGGAGGTTTTGCTGCTAATGAACTGACAAGACGTATTGAGCATGCTGAGCCCAGAGTTGTTGTGACCTCTTCATGTGGGATTGAACCAAACCGTCTAGTCTATTACAAACCAATTTTAGATGATGCcattaaaatgtcaaaatataaacCATCCACTGTCATTCTACATCAAAGAGATCAGTGTTCTGGAGATATTATTCCTGGTCAAGATGTCACCTGGGATCAAGTGATGCAGAATGCCAAACCTCATGACTGTGTGCCACTAGAATCTACAGATCCattgtatatattgtataCATCAGGGACTACTGGTGACCCTAAGGGTATAGTTCGTCGCAATGGAGGTCATGCGGTGGCCCTTCACTGGTCGATGAAAAATATCTATGGCATCAATCCTGGTGAAGTTTGGTGGGCGGCATCTGATCTGGGATGGGTTGTGGGTCAttcttatattgtatatgCACCTTTACTGGCTGGATGTACCACTGTACTCTTTGAGggTAAACCAGTGGGTACTCCTGATTCTGGGGCGTTCTTCAGAGTCATTGAGCAACACAAGGTTGTTAGTATGTTTACAGCACCAACAGCTATTAGAATTATAAGAACTGAGGACCCCAAAGCTGAACTAATCAAGCAATATGATCTTTCACACTTCCGTGACATGTTTCTGGCTGGAGAGCATCTAGATAAAGACACAATGCATTGGGCCCGTCGTGCTATTAGTGCACCAGTGTATGACAACTGGTGGCAAACAGaGTCAGGCTGGGCTATCTCAGCCCACTGTGTTGGACTTGGTCGTCCAATGGATGAACATTTACAGACAACAGGAAAGCCAGTACCAGGATATGATGTAAGAGTCATAAGAGAAGACCATACGGAAGCTGACAGAGGAGAACTTGGGCAGATTGTTGTTAAGTTACCAATGCCACCAGGGACAGCTGGAACTTTATGGAAAGCAGATGACAGATTCCAAAAAGTCTactttgagaaatatcctGGATATTACGATACTTGTGATGCAGGAATCATTGATGAAGATGGTTTTGTGTCAATCATGGCACGGACAGATGATGTCATCAATGTTGCTGGGCATAGAATATCTACTAAAGCATTAGAAGAGGGTATTTTGAAGCCAGACTTTGTGATCGATGCAGCCTGTGTTGGATATGAAGATAAAATCAAAGGGCATGTCCCAGTGGCCTTTATAACTGTTGATAAAACTTCCAAGATGAAGCATGACCAAATGATAGCTGAGGTTATTAAAAGTGTCAGACAGACTGTTGGTCCAGTTGCAGCTTTCAAAACAGCAATTATTGTAGATGGTTTACCAAAGACGCGATCAGGCAAGACAGTACGTGGTGTGTTGTCTCACCTTCTCCATGGTACTGCATACAAGATTACCCCCACAATGGAGAATCCTGATATACTTGAACATATCAAGGAGAGACTAGTTGAAGAGGGCTATAGGATGAAAGAGGAATAA

Transcript

ENSDLIT00000024193

CACAAGCCATCTTCTCTTTGCAATCTCTAAGACATTAATCATGCATCGAGCGGTTGGATTTCTACGTTATCGTCTTCCACATCTTAGATCAACTGCTGCAAATGCGATCAAAGTGCAATGCCGATCGTTGTATGTTTCTTGCTCAAAATTGTCTGTGACAAGGCAGTACACTTACGATGAAGCATTTCGGAGCTCGCTTGAAAATAGAGAGACTTTCTGGGCCGAAGTGGCGGAGGGGATCGATTGGTATAAGCCTTACAGTAAAGTCATGGATAATTCAAATCCTCCATTTACGAAATGGTTCCCTGGTGGAGAGCTAAATACCTGTTATAACTGCTTAGATAGGCACATTGAAAAGGGCAAGGGGATGCACACAGCACTTATCTATGACAGTCCAGTATCTGGCAAGATAGAGATGTATTCTTACCATAACCTGCAGAGACTGGTTGCTAAGTTTGCTGGTGCACTTAAAAGTCTGAATGTTGTTAAAGGGGATCGTGTTGTTATCTACATGCCGATGGTCCCTCAGGCTGTGATTGCAATGTTAGCTTGTGCAAGAATTGGTGCCGTCCATTCTGTTGTCTTTGGAGGTTTTGCTGCTAATGAACTGACAAGACGTATTGAGCATGCTGAGCCCAGAGTTGTTGTGACCTCTTCATGTGGGATTGAACCAAACCGTCTAGTCTATTACAAACCAATTTTAGATGATGCcattaaaatgtcaaaatataaacCATCCACTGTCATTCTACATCAAAGAGATCAGTGTTCTGGAGATATTATTCCTGGTCAAGATGTCACCTGGGATCAAGTGATGCAGAATGCCAAACCTCATGACTGTGTGCCACTAGAATCTACAGATCCattgtatatattgtataCATCAGGGACTACTGGTGACCCTAAGGGTATAGTTCGTCGCAATGGAGGTCATGCGGTGGCCCTTCACTGGTCGATGAAAAATATCTATGGCATCAATCCTGGTGAAGTTTGGTGGGCGGCATCTGATCTGGGATGGGTTGTGGGTCAttcttatattgtatatgCACCTTTACTGGCTGGATGTACCACTGTACTCTTTGAGggTAAACCAGTGGGTACTCCTGATTCTGGGGCGTTCTTCAGAGTCATTGAGCAACACAAGGTTGTTAGTATGTTTACAGCACCAACAGCTATTAGAATTATAAGAACTGAGGACCCCAAAGCTGAACTAATCAAGCAATATGATCTTTCACACTTCCGTGACATGTTTCTGGCTGGAGAGCATCTAGATAAAGACACAATGCATTGGGCCCGTCGTGCTATTAGTGCACCAGTGTATGACAACTGGTGGCAAACAGaGTCAGGCTGGGCTATCTCAGCCCACTGTGTTGGACTTGGTCGTCCAATGGATGAACATTTACAGACAACAGGAAAGCCAGTACCAGGATATGATGTAAGAGTCATAAGAGAAGACCATACGGAAGCTGACAGAGGAGAACTTGGGCAGATTGTTGTTAAGTTACCAATGCCACCAGGGACAGCTGGAACTTTATGGAAAGCAGATGACAGATTCCAAAAAGTCTactttgagaaatatcctGGATATTACGATACTTGTGATGCAGGAATCATTGATGAAGATGGTTTTGTGTCAATCATGGCACGGACAGATGATGTCATCAATGTTGCTGGGCATAGAATATCTACTAAAGCATTAGAAGAGGGTATTTTGAAGCCAGACTTTGTGATCGATGCAGCCTGTGTTGGATATGAAGATAAAATCAAAGGGCATGTCCCAGTGGCCTTTATAACTGTTGATAAAACTTCCAAGATGAAGCATGACCAAATGATAGCTGAGGTTATTAAAAGTGTCAGACAGACTGTTGGTCCAGTTGCAGCTTTCAAAACAGCAATTATTGTAGATGGTTTACCAAAGACGCGATCAGGCAAGACAGTACGTGGTGTGTTGTCTCACCTTCTCCATGGTACTGCATACAAGATTACCCCCACAATGGAGAATCCTGATATACTTGAACATATCAAGGAGAGACTAGTTGAAGAGGGCTATAGGATGAAAGAGGAATAAatactgacaaaaaaaaatcactctAACACTAGGATTTAAATATCAACTAATCACACTTGTAAATGCACTTGGTATTCCAACTGATATTCTATTTCCATCTGTTTTCTAGTTCCCCCAACCCATCCTATAATTCTTAACCAATTGGGTATTTGATGTAATTCCTTTTTCTATCATTTACGTAAATATAATTTGTCTTAATAGTCCAACTACTATGATATTTTCTATCCTTTTTCTAGTTCTCCCCAAACAGTCCCATGATGCTTTTCTTCATATATAGCGTGATTGggtcaataaatatatataaatcaaaaacgtttttctgtgacacatatatatatatatattctagtTTAGTATTCAAGCttttattcagtttttcaTATCATTGTCTACTTTCACCCAAAACGTCCCATGATGCTTTCACTATAACCGACATCTCAAGGTTACAATAAATGCAATTTGATATGAATAAACAGAATTGTCCTATACTTGTCCTATACTtgcctttgtttgttttgtttttttccttgtggctctttgtttgtttgttgttgttgttgttttttgcttgcttgcttgtgaCGTTTTGCTATAGACCCCTTCAGTTCGTTGAAATggagctcaacctggaggacaaaacaatggatttctgctcccaagagagcaaaaatttttgttttgtcttccagatggggctgctttgacgtcattTGTAAGGGATCTATTTTGTTGagttgattgtttatttgggCTACAGGTAAcccaagctagatgtttgtgaccgtttttagccgtataaaacgaaataaataaaatacgaTACAAAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H6R3	Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Homo sapiens OX=9606 GN=ACSS3 PE=1 SV=1
Q5REB8	Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Pongo abelii OX=9601 GN=ACSS3 PE=2 SV=1
A0A0G2K047	Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acss3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000999 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan
PF16177 all species →	ACAS_N	Acetyl-coenzyme A synthetase N-terminus	Family	Interproscan
PF13193 all species →	AMP-binding_C	AMP-binding enzyme C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR032387 all species →	Domain	Acetyl-coenzyme A synthetase, N-terminal domain	Interproscan
IPR025110 all species →	Domain	AMP-binding enzyme, C-terminal domain	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43347 all species →	ACYL-COA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0050218 all species →	Molecular Function	propionate-CoA ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01908	ACSS3, prpE; propionyl-CoA synthetase	EC:6.2.1.17	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.