Gene detail

Detailed information of ENSDLIP00000023373.1 in Diadumene lineata

Genomic Location: :...
NR annotation: XP_020905637.1, protein jagged-1 isoform X1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDLIT00000025791

ATGGCCCGTGGATTCATAATTAAAAGCCTGTTTATAGTGGTCGTTCTGATTGCTCTATGGTTTGAGATTGCTGTTGGAGCTGGGCATTTTCAAATACAGTTAGTCTCCTATCAAAATATTGCTGGAGAACTGAGAGATGGACGGTGTTGTGATGGGAGTCCTACAATATACGGACAACGTAAAAGATGCGAAAATCCATGCGAGACTTTCTTCAAGATTTGTCTTAAACAATACGGTCAATCAATTTCTGCAAATGGACGTTGTACTTTCGGAAAAGTTACCACTAAAGTTTTGGGGAAAAACTCTTTTGCAATTACGAACAGTTCTGCGAATATCTTTTCCATTCGATTTATGTTTTCATGGCTGACCACTTATCAGCTTGTAATAGAAGCACATGATAAAGATGACGATGGAAGCAGTCAGTTGATTGATCGCACCTCATATCGTGGAGTTATACTGCCAAACAGAACCTGGGAACAGCACAATTTCAATGGCCTAACTGCTGCAATAAAGTACAAATTGCGAGTTATTTGTGATCCTTTCTACTATGGTAAAACATGCACTCATTTATGCAAGCCGAGAAATGATAAGTTTGGACATTTTGACTGTGATGAACAGGGCAGGAAGATTTGCCATCCTGGATGGAGGGGAGAACTATGCAGAGAAGCAATATGTAAGAAAGGCTGTAATACTCGTCATGGTAAATGTTCTCTTCCTGGAGAATGCAAaTGTTTTCATGGCTGGGAGGGGCCACTATGTGATCAGTGTGTGACATATCCTGGCTGTGTCCATGGTAACTGTTCTACGTCATGGGAGTGTAACTGTAAGAACCGCTGGGGTGGTATGCTGTGCGACAGAGaCTTGGATAAATGCCGCAAACTTCCTTGTCAAAATGGAGGGACATGTTTCAACAGCGGTCCGGACAATTATCGCTGTGATTGCACGCCAGGTTACACTGGGAAGAACTGTGAAACCAAAATCAATTTCTGTGCTTCTAATCCTTGTCTGAACGATGGCACTTGTAATAACGATGTGATTGGTTTTCATTGTAACTGCACTAGCCAATGGGAAGGCAGAACATGCCAAATAAgCAAAGGATGCCACAGCAAGCCATGTAAGAACGGAGGGACATGCCTCACTGATAAGTCTGGGTTTAAGTGCAGATGCAAGCCGGGATGGGAAGGAAAGAAGTGTGAAAAAAACATTAACGAGTGCGCGTCATCTCCATGTGTTAATGGACGAAAGTGTATCGATCTTGTGAATGACTATGCATGTGAATGTCAGACGGGTTGGAAAGGACGGAATTGCGACACCAACATCAACGATTGCGCTGGCCAATGTAAGAACAATGGCACTTGTGAAGACAAAACCAACGACTACCTCTGTCACTGTACGCCTAACCACTCAGGACGACACTGTGAAATCACTACGGATCACTGTCTGAGAAAGCCGTGTTTGAATGGAGGTGTCTGTCAGAGTAGGTCCAATGGCTACCAGTGTGTCTGCCCTGTAGGATTCCGTGGTATCAACTGCCAACTGCGCATCAATAACTGTCATCCAAACCCGTGTAAACACGGTCACTGTAGGGATCTCATCGGTGATTACAAATGTATCTGTAGTTCTGGTTTCACGGGACGAAACTGTTCAGATACTGTGACATCAACGGATAGCAATCCATGCGATCCTGATCCATGTGTTCACGGTGGTACATGCGTTAAGCTATCCAGCTCTAGCAGCCAGTGCAAGTGCGCTCCAGGATACGCAGGAGCTTTCTGTGAGACTAACATTAATGAATGTCTTTCTTCACCGTGTCTCAACGGAGGCACCTGCCTTGATGTAATCAATGGATTTAAGTGTATATGTCCAACTGGATTCAACGGTTCGTTGTGTGGTAATAACGTCAACGAGTGCGCGTCGTCACCGTGTCATCATTCTGCGACGTGTATCGATAAAGTTAATGACTACGAGTGTAATTGTGCGTCAGGGTACACTGGTGTCAACTGTGATATTGATGTGAATGACTGCGGACGTGATAATCCTTGTCGCAATGGAGGGACGTGTCAAGATAGATTAAATGGATATGTTTGTACATGCAGACCCGAGTTCACTGGCCCACAATGCAACACACCTATAGATAAGTGTCTTAGCAACCCATGTCGTAACAATGGGACGTGTATCCAAGGGCTTGGAGTATCACTATGTTCGTGTCCCCTTGGCTACACTGGTGAACGGTGTGAAATAAAGCTAAATGCTTGTGACACTGCGCCGTGTCGTAATTCAGGTACATGTATTCCTGGTGTAAAAAGTTATCGATGTATCTGTCCACTTGGTCTCGCGGGTCGTAACTGCCAAACACCTGTCAATCATTGCGCTAACTTCTCATGTTATAACGGGGGTACTTGCGCCAATGGGCGCTACAAAGCAACGTGTGTGTGCACTGCTGGTTACACTGGCAAACACTGTGAGGTTGATATCGATGAATGTAGTTCTAACCCTTGCCAACATGGTGGAGTGTGTCAGGATAAAGTGAATATGTTCTATTGTCAGTGTCCTGTTGGGACCAGAGGACAGTTTTGTGAAGAAGtGATCGATTCGTGTAAGATTGCAGTGTATCAGAACGAAACGTACAGTAGACTGGTAGACTCAGACGTGTGTGGTGATCACGGGACATGCCAGAATATTGACGGTGGAGATTTTCGTTGTAAATGCAGGAGTGGTTACACTGGGAACCACTGTCATATTAATATCGATGATTGCGCTCGCAACCGATGTCAAAATGGTGCAACGTGCATCGATGGAATCAACTCGTATAAATGTCTGTGTTCTGATGGATGGGACGGAAAATTCTGCGAGAAAAATGTGGATGATTGTAAAAGCAACCCGTGTAAAAACAACGGTACTTGCACAGATCTTATCAACGACTTTGAGTGTGTCTGCCCTTCACCTTGGAAAGGAAAAACGTGCAATTCAAGAATATCCCACTGCGAGCGTAACTTTTGCCAAAATAATGGAACGTGCCAAGAAACCGATGGAAACAATTACTCTTGTGTATGTCGGAAAGGCTACAGTGGACGAATGTGTCAAAATGAGGATGGACGATGCTTTTCGAAACCGTGTCAGAATGGTGGAACATGTGTCGAAAAACCTGGCGGAGATGTTTCGTGTCTGTGTAAAAACGGTTGGGTTGGCTACTATTGTGACAAAAACGAGGATGACTGCGCTAAAAACCCTTGCTACAACAATGGCCGTTGTGTTGACATGGTTGGTTTTCGCGTCTGTGCCTGTGAGCCTGGTTTTACCGGACCGGACTGCAGAATAAACATCGACGAGTGTGCGTCATCGCCGTGTTTTAACGGTGGTACTTGTATAGATGGCATAGGAGAATATCAATGTCTATGTCCGCTGGGAAAGATTGGAGCTAGGTGTGAAGCCAACGAAAACGATCCCAACGTATGTGTGGTGGGTGATCGTATCTACAACAGTAACGAGACAACACAGCAAGACTGCAATACGTGCACTTGCTACAAAGGAGTACAGACGTGTACGAAAGTGGTTTGTGGACCGAGAAACTGCCTCAGCACTGCCAAACACAAAGGTAACCATGGATGTCAAGTTGGTGACGTGTGTCGACCGAAGCAAGGTGGCTGTCTAAAGCCGCCATGTCATGCATACGGTGTGTGTACTGGTGTGACGAGTACGTCAATTGGTGGTGATGTTATTGGTGATGACGTCTGTCTCCCAAATACTACACTGCTCAGTGGAGACTGCGCCAAGATTAATATCCTTCTTAATGTGCCTCAGATTCCTAAGGGAACAATAATCGAGGAGTTCTGCAGTCAGCTTCGTTACTTACCATTGTTACAGAAATACGCTATTAAGGCTCATATAAGACTGCTCTGTGAAGGACGAATTCCTAAAACAAAAGTCATACGAAGAGATACGGCGACCGTTGTGGTGTCCGTGGCGAGTACAAAAGAGTCCGGAGTAGCCGAGAAAGCTGCTAGCGATATTGTCAAGTTTATCCTATCGCATAAGGACAATCCTAAAACAAACGTTACGCTGTACAAGGTCTTCATAGCAGTCAGAGAAGTGTCTGTTGAAAGATCCATCACATTGTCACATCACAAAGAAAAAGAACAAGAAGCACCGATGTATCTAATCCCCCTTATCGCCTCACTAGTCGTCCTAGCTGCTATGCTTCTACTAATCTTGTGCATACGTGGCAAATGGCGCGACAGAAAACGACGCGATGATGCAATCTTAGAGGGACACATTCCTCTGAAAAAGAAACGCAACGTTACTGTAACCGGTGATGGACGTAAGTACTTCAACCAGTCATCTCATGATTCAACATcatcacagtcatcatcatcaactcaATCAACCGAACTTAGAACCTTTGATTATAACCGAGCGAGTCTGTTGGACTCGGCGTCGACTTGCTCCTCCCCTCCTGTGCTATCCCCACCCCTATCCCCTAAGGAAGAAGGGGCTAAGGACGAATGGCGGAGATTCCGAGTGCACAGAAATAGCACACAAATAGAGATAATTGTATAG

Transcript

ENSDLIT00000025791

ATTTGATGTAAGCAACGATAGAAACGACGACTCATGCTGCAAAATATCAACCCTCGCTTTCCTGCCTGCCTTCCCCTTGCTTTGATACCTGCATAAACCCATGGCCCGTGGATTCATAATTAAAAGCCTGTTTATAGTGGTCGTTCTGATTGCTCTATGGTTTGAGATTGCTGTTGGAGCTGGGCATTTTCAAATACAGTTAGTCTCCTATCAAAATATTGCTGGAGAACTGAGAGATGGACGGTGTTGTGATGGGAGTCCTACAATATACGGACAACGTAAAAGATGCGAAAATCCATGCGAGACTTTCTTCAAGATTTGTCTTAAACAATACGGTCAATCAATTTCTGCAAATGGACGTTGTACTTTCGGAAAAGTTACCACTAAAGTTTTGGGGAAAAACTCTTTTGCAATTACGAACAGTTCTGCGAATATCTTTTCCATTCGATTTATGTTTTCATGGCTGACCACTTATCAGCTTGTAATAGAAGCACATGATAAAGATGACGATGGAAGCAGTCAGTTGATTGATCGCACCTCATATCGTGGAGTTATACTGCCAAACAGAACCTGGGAACAGCACAATTTCAATGGCCTAACTGCTGCAATAAAGTACAAATTGCGAGTTATTTGTGATCCTTTCTACTATGGTAAAACATGCACTCATTTATGCAAGCCGAGAAATGATAAGTTTGGACATTTTGACTGTGATGAACAGGGCAGGAAGATTTGCCATCCTGGATGGAGGGGAGAACTATGCAGAGAAGCAATATGTAAGAAAGGCTGTAATACTCGTCATGGTAAATGTTCTCTTCCTGGAGAATGCAAaTGTTTTCATGGCTGGGAGGGGCCACTATGTGATCAGTGTGTGACATATCCTGGCTGTGTCCATGGTAACTGTTCTACGTCATGGGAGTGTAACTGTAAGAACCGCTGGGGTGGTATGCTGTGCGACAGAGaCTTGGATAAATGCCGCAAACTTCCTTGTCAAAATGGAGGGACATGTTTCAACAGCGGTCCGGACAATTATCGCTGTGATTGCACGCCAGGTTACACTGGGAAGAACTGTGAAACCAAAATCAATTTCTGTGCTTCTAATCCTTGTCTGAACGATGGCACTTGTAATAACGATGTGATTGGTTTTCATTGTAACTGCACTAGCCAATGGGAAGGCAGAACATGCCAAATAAgCAAAGGATGCCACAGCAAGCCATGTAAGAACGGAGGGACATGCCTCACTGATAAGTCTGGGTTTAAGTGCAGATGCAAGCCGGGATGGGAAGGAAAGAAGTGTGAAAAAAACATTAACGAGTGCGCGTCATCTCCATGTGTTAATGGACGAAAGTGTATCGATCTTGTGAATGACTATGCATGTGAATGTCAGACGGGTTGGAAAGGACGGAATTGCGACACCAACATCAACGATTGCGCTGGCCAATGTAAGAACAATGGCACTTGTGAAGACAAAACCAACGACTACCTCTGTCACTGTACGCCTAACCACTCAGGACGACACTGTGAAATCACTACGGATCACTGTCTGAGAAAGCCGTGTTTGAATGGAGGTGTCTGTCAGAGTAGGTCCAATGGCTACCAGTGTGTCTGCCCTGTAGGATTCCGTGGTATCAACTGCCAACTGCGCATCAATAACTGTCATCCAAACCCGTGTAAACACGGTCACTGTAGGGATCTCATCGGTGATTACAAATGTATCTGTAGTTCTGGTTTCACGGGACGAAACTGTTCAGATACTGTGACATCAACGGATAGCAATCCATGCGATCCTGATCCATGTGTTCACGGTGGTACATGCGTTAAGCTATCCAGCTCTAGCAGCCAGTGCAAGTGCGCTCCAGGATACGCAGGAGCTTTCTGTGAGACTAACATTAATGAATGTCTTTCTTCACCGTGTCTCAACGGAGGCACCTGCCTTGATGTAATCAATGGATTTAAGTGTATATGTCCAACTGGATTCAACGGTTCGTTGTGTGGTAATAACGTCAACGAGTGCGCGTCGTCACCGTGTCATCATTCTGCGACGTGTATCGATAAAGTTAATGACTACGAGTGTAATTGTGCGTCAGGGTACACTGGTGTCAACTGTGATATTGATGTGAATGACTGCGGACGTGATAATCCTTGTCGCAATGGAGGGACGTGTCAAGATAGATTAAATGGATATGTTTGTACATGCAGACCCGAGTTCACTGGCCCACAATGCAACACACCTATAGATAAGTGTCTTAGCAACCCATGTCGTAACAATGGGACGTGTATCCAAGGGCTTGGAGTATCACTATGTTCGTGTCCCCTTGGCTACACTGGTGAACGGTGTGAAATAAAGCTAAATGCTTGTGACACTGCGCCGTGTCGTAATTCAGGTACATGTATTCCTGGTGTAAAAAGTTATCGATGTATCTGTCCACTTGGTCTCGCGGGTCGTAACTGCCAAACACCTGTCAATCATTGCGCTAACTTCTCATGTTATAACGGGGGTACTTGCGCCAATGGGCGCTACAAAGCAACGTGTGTGTGCACTGCTGGTTACACTGGCAAACACTGTGAGGTTGATATCGATGAATGTAGTTCTAACCCTTGCCAACATGGTGGAGTGTGTCAGGATAAAGTGAATATGTTCTATTGTCAGTGTCCTGTTGGGACCAGAGGACAGTTTTGTGAAGAAGtGATCGATTCGTGTAAGATTGCAGTGTATCAGAACGAAACGTACAGTAGACTGGTAGACTCAGACGTGTGTGGTGATCACGGGACATGCCAGAATATTGACGGTGGAGATTTTCGTTGTAAATGCAGGAGTGGTTACACTGGGAACCACTGTCATATTAATATCGATGATTGCGCTCGCAACCGATGTCAAAATGGTGCAACGTGCATCGATGGAATCAACTCGTATAAATGTCTGTGTTCTGATGGATGGGACGGAAAATTCTGCGAGAAAAATGTGGATGATTGTAAAAGCAACCCGTGTAAAAACAACGGTACTTGCACAGATCTTATCAACGACTTTGAGTGTGTCTGCCCTTCACCTTGGAAAGGAAAAACGTGCAATTCAAGAATATCCCACTGCGAGCGTAACTTTTGCCAAAATAATGGAACGTGCCAAGAAACCGATGGAAACAATTACTCTTGTGTATGTCGGAAAGGCTACAGTGGACGAATGTGTCAAAATGAGGATGGACGATGCTTTTCGAAACCGTGTCAGAATGGTGGAACATGTGTCGAAAAACCTGGCGGAGATGTTTCGTGTCTGTGTAAAAACGGTTGGGTTGGCTACTATTGTGACAAAAACGAGGATGACTGCGCTAAAAACCCTTGCTACAACAATGGCCGTTGTGTTGACATGGTTGGTTTTCGCGTCTGTGCCTGTGAGCCTGGTTTTACCGGACCGGACTGCAGAATAAACATCGACGAGTGTGCGTCATCGCCGTGTTTTAACGGTGGTACTTGTATAGATGGCATAGGAGAATATCAATGTCTATGTCCGCTGGGAAAGATTGGAGCTAGGTGTGAAGCCAACGAAAACGATCCCAACGTATGTGTGGTGGGTGATCGTATCTACAACAGTAACGAGACAACACAGCAAGACTGCAATACGTGCACTTGCTACAAAGGAGTACAGACGTGTACGAAAGTGGTTTGTGGACCGAGAAACTGCCTCAGCACTGCCAAACACAAAGGTAACCATGGATGTCAAGTTGGTGACGTGTGTCGACCGAAGCAAGGTGGCTGTCTAAAGCCGCCATGTCATGCATACGGTGTGTGTACTGGTGTGACGAGTACGTCAATTGGTGGTGATGTTATTGGTGATGACGTCTGTCTCCCAAATACTACACTGCTCAGTGGAGACTGCGCCAAGATTAATATCCTTCTTAATGTGCCTCAGATTCCTAAGGGAACAATAATCGAGGAGTTCTGCAGTCAGCTTCGTTACTTACCATTGTTACAGAAATACGCTATTAAGGCTCATATAAGACTGCTCTGTGAAGGACGAATTCCTAAAACAAAAGTCATACGAAGAGATACGGCGACCGTTGTGGTGTCCGTGGCGAGTACAAAAGAGTCCGGAGTAGCCGAGAAAGCTGCTAGCGATATTGTCAAGTTTATCCTATCGCATAAGGACAATCCTAAAACAAACGTTACGCTGTACAAGGTCTTCATAGCAGTCAGAGAAGTGTCTGTTGAAAGATCCATCACATTGTCACATCACAAAGAAAAAGAACAAGAAGCACCGATGTATCTAATCCCCCTTATCGCCTCACTAGTCGTCCTAGCTGCTATGCTTCTACTAATCTTGTGCATACGTGGCAAATGGCGCGACAGAAAACGACGCGATGATGCAATCTTAGAGGGACACATTCCTCTGAAAAAGAAACGCAACGTTACTGTAACCGGTGATGGACGTAAGTACTTCAACCAGTCATCTCATGATTCAACATcatcacagtcatcatcatcaactcaATCAACCGAACTTAGAACCTTTGATTATAACCGAGCGAGTCTGTTGGACTCGGCGTCGACTTGCTCCTCCCCTCCTGTGCTATCCCCACCCCTATCCCCTAAGGAAGAAGGGGCTAAGGACGAATGGCGGAGATTCCGAGTGCACAGAAATAGCACACAAATAGAGATAATTGTATAGTTTATTTATAGAGTATGATGTCATAGCAAATTTCTAATGCTTAAAGAACAaattgtaatatatatataatagaaTGACGTTACTACTTCATGTAAGGTTGCCTATAGTTGTACGGCAAAGAATTCAATAGCCGTGCACACTATAAGTTACTTTACATGGCGTTCTAATCCCATGTTCATATCTTGGAAAGGCCCAGTCTCCCTCGTCCTGTTTCAATGTAGGGATTCCTCAAAGGGCATTTATCTTGCGGGTGTTATTTTGGTACCATTCCTCTGCGTTCATATTTGTTCTTGGTGGAATGAAACcaacatttttggaaattttaccCTGTGTAGGTTCCTTTACTAAGAGGTAGTGTTCTAGAACTATAGATCCCTTACAGTTCGTTGAAATGTAGCTCAACCTgcaggacaaaacaatggatttcagctcccaagtgaagaaaaatcttttgttttgccctccaggggccggttgctcaaagctcgattagtgctaatccatggttaactctataggttttcttaagagttaacccaggattagtgctaatcgggctttgaacaacccagcccaga

Protein

Uniprot

Uniprot term	Description
Q90Y57	Protein jagged-1a OS=Danio rerio OX=7955 GN=jag1a PE=2 SV=1
Q90Y54	Protein jagged-1b OS=Danio rerio OX=7955 GN=jag1b PE=2 SV=1
P78504	Protein jagged-1 OS=Homo sapiens OX=9606 GN=JAG1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07657	MNNL	N terminus of Notch ligand C2-like domain	Domain	Interproscan
PF21700	DL-JAG_EGF-like	Delta-like/Jagged, EGF-like domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF01414	DSL	Delta serrate ligand	Domain	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR011651	Domain	Notch ligand, N-terminal domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR001774	Domain	Delta/Serrate/lag-2 (DSL) protein	Interproscan
IPR001007	Domain	VWFC domain	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR026219	Family	Jagged/Serrate protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12916	CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0007154	Biological Process	cell communication	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06052	JAG1, CD339; jagged-1	-	CD molecules	ko04090	deepkoala