Gene detail

Detailed information of ENSDLIP00000023386.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020892338.1, tetratricopeptide repeat protein 7B [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

ENSDLIT00000025806

atgtcTCGACGAAGTACAAGAACAACTCTTGAAAACGAAATTGAGCGTGCAAGAGTCGAAGGAAGATGGGATACAGTGAGAAAATTAGTCGAACAAATCTCCAATAGAACTACATCAGAATCGAAACCTGATTTGTTAAAAGTATTACTGCTTGGGGAGGCTGATTTAGAGATTTTCCTGCAAGAGAACCCATTGGATACAATCAATGCAGAACATGTCAAAGGTTCTATACAATCTGCCATCAAAATATTAGAGAAAGCTGCAACATCTAAAGATGAGAAAAGGgatgACAGATATCAAGAAGCTGTGTTATTATTATGCAAGGCTCACTTTTTAGCCAAAGACTATCCTCAGTGTATAAGTTACATGGACGAAGTTGCTAGTGAAGAATTTGCTGTAGATATTCACTCAAGGAGAAGATCAAAATTGTTTGCTGAGGGTTTTGCATATAAAGgTATGGCATTAGAGGAGCTTCAATCGGCTGGTGATTCAACTATTAACACTGACGACATTATATCATGTTATGAAATTGCTGGCGATATTGCAATGTGGCTATTAGCTGGACAGAAAACATCTTCATCTCTAGTCATCCAACCAATGGCTGGAGAAATGAGCTCAGCAATGGAGGTTGCTATCCAAAGAGCACCAATTTTACACATTAAAGCTGGaaaTCTTCCAACTGCTATTAAGAGATTTAGGAATCTGTTGAAGGCATTGGAATCCAAGGCAACACATGAATTAAGAAAGGTTTTAGCAAGACAGTTATCAGAGCTTTTATTACGTGGAGTGTGCAGCCAAATGTATGAGAAACCAGTGTATGTCAACACCAACATTCCTGGATCTACTGCATCATTATCAAGAGGCACTGCAAAGATTGATACCCCTAAAATGACTAGTGACAGAAGAAACTCTTCACTACAGCCTTTGGTTCACTCTGGTGATAGTTTATTTGTACCAAGGGATGAGATGGAGGAagtgttgctgttgttgcttcTTGAAGACACCATGGTTCTAAGGGATGCAGTCCTCAGTCAAGCCCCTGATAAAACAGAAGCCCGTCTACGTACATCAGTGGAGGCCAACGCTGTATATGATTTGCTTGTTATTGCTTTGACTAGAAGGGCTCAGTATGGCATGCTGGTTGAATGTCTTGACAAAGGTATGAAGTTAGCATTTGGAGAATTTCACTTGTGGTTTCAGTTTGGGCTGTCATTGATAAGTGCAGGAAAGTTTCAGAGAGCACTTCTAGTACTGAGGCAGTGTGCACAACTTAACCCAGACGATCCATTGGTACCTTTATATGCTGCAAAACTTTGCTTTAACTACTTACGCATGATTGACGAGGGTGTTAAGTTTGCTCAGCAAGTGGTTGCTATGGGTGATGGCATAATGCTAGCATGCAAGGGCTATCAGCTGTTGGGTGTTGGCTACAGTCTTCAAGCAGGAGAAGctTCACTAAGTGCTGACAGACAGAGACTTCAAAAACTTTCAATAGATGCATTAGAAAAGGCTCTAGATCATGACCCCCATGACCCTGAAGTGCTGTTCCATTTGGCTTTAACACAAGCACACGCTAGACAGatatctAGAGCAATGAAGAACCTTAAAAGAGCAGTCAAGCTTGATGGAGATAACGTTCATTACCTTCACCTTCTAGCTTTGTTACTCTCTGCACAAAACAAGTATGGTGAAGCACTTGAGGTATGCGATGCTGCACTTTTAGAATTTCCAGAAGAATTTAGTTTGATGCTTACCAAGGTTAAACTTGAGGTCATGTGCATTGGTGGTGACCAGGCTCTTATCACCTGCAAACGTATGCTGGAGACATGGAAACTAGCCTATGAATCTGAAATGGTTGATTTGTCAACAGATATCAAAAGAACAGGCTCTGGATTACTTGACAAAGTAGTTGCTGATACCAGAAGTTTAAAGCAATTTCCCTTGACAGAGATAAGCAGTGAGAAGGGCGATGACACAGGATCCATTGCTGCATCAGTACGTCTGGAAAAAACTCTCTCTGATGAAGCATCAACTACAATGGGTAAACTAAGCATCCCAGCAGTACTTGCACTCCAGGCGAAACTATGGGTGGCTATTGctGATGTTTTCATTAATCTTGAGAAAGATGCAGAAGCCAGTGCTTGTATTCAAGAAGCAAATTTGATATTTCCATTGTCAGCAGATGTGCTTTACCAgCGTGGTCGTATCTATGAGCTGCGTAATAATCTCCCAGAAGCTAAAACAATGTACAGCAATGCTATTTctataaatcaaaatcataTACCAAGTTTACAGAGTCTGGGTATTGTTTATGAAAAGTTGAATAATTTAACAATGGCTGAGAAAATTCTTAGAGAAGCCATCAATGTTGACCCGACAGCTCATGTTGCATGGCATTACTTAGGTGTTGTGTTGGAGCGTCAACAAGAACATGAAGCGGCCAGTGAATGCCTTTTTACAGCTGTTGATCTTGAAGCAACAGCACCCATTGTCAACTTCTCAATCATACCAAGAATTTTATAA

Transcript

ENSDLIT00000025806

TGGTAATCAACAAAATGGCCGCTTTGGCAGCTTTCGTATGGATGTGGTTAAGCATCTCTATGGTAAATCTTTCATGATTTGCGCTACCTTCTGTTATAAACCAAAATAATATGTTCTTGCTGGTCTTAAGATAGCCAAGAAGcattttatttgtgaaaatgtcTCGACGAAGTACAAGAACAACTCTTGAAAACGAAATTGAGCGTGCAAGAGTCGAAGGAAGATGGGATACAGTGAGAAAATTAGTCGAACAAATCTCCAATAGAACTACATCAGAATCGAAACCTGATTTGTTAAAAGTATTACTGCTTGGGGAGGCTGATTTAGAGATTTTCCTGCAAGAGAACCCATTGGATACAATCAATGCAGAACATGTCAAAGGTTCTATACAATCTGCCATCAAAATATTAGAGAAAGCTGCAACATCTAAAGATGAGAAAAGGgatgACAGATATCAAGAAGCTGTGTTATTATTATGCAAGGCTCACTTTTTAGCCAAAGACTATCCTCAGTGTATAAGTTACATGGACGAAGTTGCTAGTGAAGAATTTGCTGTAGATATTCACTCAAGGAGAAGATCAAAATTGTTTGCTGAGGGTTTTGCATATAAAGgTATGGCATTAGAGGAGCTTCAATCGGCTGGTGATTCAACTATTAACACTGACGACATTATATCATGTTATGAAATTGCTGGCGATATTGCAATGTGGCTATTAGCTGGACAGAAAACATCTTCATCTCTAGTCATCCAACCAATGGCTGGAGAAATGAGCTCAGCAATGGAGGTTGCTATCCAAAGAGCACCAATTTTACACATTAAAGCTGGaaaTCTTCCAACTGCTATTAAGAGATTTAGGAATCTGTTGAAGGCATTGGAATCCAAGGCAACACATGAATTAAGAAAGGTTTTAGCAAGACAGTTATCAGAGCTTTTATTACGTGGAGTGTGCAGCCAAATGTATGAGAAACCAGTGTATGTCAACACCAACATTCCTGGATCTACTGCATCATTATCAAGAGGCACTGCAAAGATTGATACCCCTAAAATGACTAGTGACAGAAGAAACTCTTCACTACAGCCTTTGGTTCACTCTGGTGATAGTTTATTTGTACCAAGGGATGAGATGGAGGAagtgttgctgttgttgcttcTTGAAGACACCATGGTTCTAAGGGATGCAGTCCTCAGTCAAGCCCCTGATAAAACAGAAGCCCGTCTACGTACATCAGTGGAGGCCAACGCTGTATATGATTTGCTTGTTATTGCTTTGACTAGAAGGGCTCAGTATGGCATGCTGGTTGAATGTCTTGACAAAGGTATGAAGTTAGCATTTGGAGAATTTCACTTGTGGTTTCAGTTTGGGCTGTCATTGATAAGTGCAGGAAAGTTTCAGAGAGCACTTCTAGTACTGAGGCAGTGTGCACAACTTAACCCAGACGATCCATTGGTACCTTTATATGCTGCAAAACTTTGCTTTAACTACTTACGCATGATTGACGAGGGTGTTAAGTTTGCTCAGCAAGTGGTTGCTATGGGTGATGGCATAATGCTAGCATGCAAGGGCTATCAGCTGTTGGGTGTTGGCTACAGTCTTCAAGCAGGAGAAGctTCACTAAGTGCTGACAGACAGAGACTTCAAAAACTTTCAATAGATGCATTAGAAAAGGCTCTAGATCATGACCCCCATGACCCTGAAGTGCTGTTCCATTTGGCTTTAACACAAGCACACGCTAGACAGatatctAGAGCAATGAAGAACCTTAAAAGAGCAGTCAAGCTTGATGGAGATAACGTTCATTACCTTCACCTTCTAGCTTTGTTACTCTCTGCACAAAACAAGTATGGTGAAGCACTTGAGGTATGCGATGCTGCACTTTTAGAATTTCCAGAAGAATTTAGTTTGATGCTTACCAAGGTTAAACTTGAGGTCATGTGCATTGGTGGTGACCAGGCTCTTATCACCTGCAAACGTATGCTGGAGACATGGAAACTAGCCTATGAATCTGAAATGGTTGATTTGTCAACAGATATCAAAAGAACAGGCTCTGGATTACTTGACAAAGTAGTTGCTGATACCAGAAGTTTAAAGCAATTTCCCTTGACAGAGATAAGCAGTGAGAAGGGCGATGACACAGGATCCATTGCTGCATCAGTACGTCTGGAAAAAACTCTCTCTGATGAAGCATCAACTACAATGGGTAAACTAAGCATCCCAGCAGTACTTGCACTCCAGGCGAAACTATGGGTGGCTATTGctGATGTTTTCATTAATCTTGAGAAAGATGCAGAAGCCAGTGCTTGTATTCAAGAAGCAAATTTGATATTTCCATTGTCAGCAGATGTGCTTTACCAgCGTGGTCGTATCTATGAGCTGCGTAATAATCTCCCAGAAGCTAAAACAATGTACAGCAATGCTATTTctataaatcaaaatcataTACCAAGTTTACAGAGTCTGGGTATTGTTTATGAAAAGTTGAATAATTTAACAATGGCTGAGAAAATTCTTAGAGAAGCCATCAATGTTGACCCGACAGCTCATGTTGCATGGCATTACTTAGGTGTTGTGTTGGAGCGTCAACAAGAACATGAAGCGGCCAGTGAATGCCTTTTTACAGCTGTTGATCTTGAAGCAACAGCACCCATTGTCAACTTCTCAATCATACCAAGAATTTTATAACCTACTAAGCTTAAAGTTACCAAAAGAGACATGAGATGTTTAGATTGATAGTGTCCATTACAGATGTCTTGTGTGGTTTGCCGAACAAAAAGAAGACATCTGCAACAGAGGCTATTTAGTAAATACAACATTATCAAGCTAAAGTGTTTAATAAAAGCAGGATACACTCTCTGGAAttagttgtacgaagcctgaatagtgttatttactggataaatccctatccagagGATAAAATTCTTTacacatattttatttatgatCAAGGCTCCATGCAACTGTCCTCTGAATGTAATGCAGATAGAGAGACTTGAAGTAAAATTAAAGCACAAGAAatgtattataaataataagtatTGTATAGGTGAATTAGAAAACATGTGTGATATCTAACAGGGTAACATTTCTATCTGGGGTGGGTTCTGCAATGtctggatagcactatccaccagataaatccacTAAATAATGCTGTGGACACGAGGCTTTGTGTTGTCTGATAGATATGTACTTGCAAACTTGACAATATTTTGGGGCATTGTTTCAGTCAATTTGATTCATAATATAGGTTACATACAAGAATTAATCATTTATGGGGTGCAAGCCCGTTGAGGGGGGACTCTGGGGGTAAATGATCGAGGATGCTCGTGGTATCTTTTAAGAGTAAAAATCTGTGATTTGGTCACTTTTTGggttaaaaaatatgaaatttacccactgaaactcatgattttggtatcttttagagatgaaaaatttgtaaagccacacccttttgaaaaacgtctggtatcttttaggggtatttttgaaaaattctgacgAGTATCCCCCATCATTTTCCCCATAGTTACCCCAAGTGCAAGTTAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86TV6	Tetratricopeptide repeat protein 7B OS=Homo sapiens OX=9606 GN=TTC7B PE=1 SV=3
E9Q6P5	Tetratricopeptide repeat protein 7B OS=Mus musculus OX=10090 GN=Ttc7b PE=1 SV=1
Q8BGB2	Tetratricopeptide repeat protein 7A OS=Mus musculus OX=10090 GN=Ttc7a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004192 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF19440 all species →	TTC7_N	Tetratricopeptide repeat protein 7 N-terminal	Repeat	Interproscan
PF12895 all species →	ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR051722 all species →	Family	Endocytosis and PI4K-regulating protein	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR045819 all species →	Domain	Tetratricopeptide repeat protein 7, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23083 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN, TPR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0046854 all species →	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21843	TTC7; tetratricopeptide repeat protein 7	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.