Gene detail

Detailed information of ENSDLIP00000024215.1 in Diadumene lineata

Genomic Location: :...
NR annotation: GCB82695.1, hypothetical protein [Scyliorhinus torazame]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDLIT00000026796

GACATATttgatggaccattagattattgatttgtttttgttcgtGGTGGATATGATTGGACCATACTATGCCCTTATTTCCGGTAAGAATATACTTTCCTATTTATAGTAGGCGTATTTCATTCgtatttaattgattttctttcaAGCCTACTTCGATGGCAGAGTAGAACGCTGTCGTCTGGTTGCTGATTAACGGTTCTCTTACTTAACCGGTAACGCAAGAAGTTCTCTAAAATTTTAACAGGTACTATATATGACTTTGTACCATCAAACTCTACAGAAGTCTACAATTTGGTATGGCTAATaagtctttatttttttccacaaTCGtgaaatctgcgaaaaaaccAAAGAATATAAGCACTGCTCTCTCAAAAACCGCTCTCGTTGTTAAAAAGGTAGCTGGCAAGCCACAATCTGAAGAACAAACTCCATCTTTCGAAGACGCTATTGCTGTCGCAAAACAACTTGAGGATCTCCTCCAAAAAAAAGATGATCTTCAAAACAAGGTTAAAGAGAAATTTAACTCTTGGAGGAATAGCAGACAAGATCTAATTTCTTCTCTGAATAGCTTGGCCAAAAATCTGCATGAAGTGCACCTCGCCATCAATGTGACCACTTTGACCGGATCTATTTCTGGGGTTGTGGGAGGTGGGGCCACGATCGCTGGTCTTGTGCTAGCTCCATTTACAATGGGTGCTTCTTTGGTTCTTACTGTTGGTGGCGCTACTGTCAGTGCAGCAGGTGGAGTAGTTTCGCTCGTAGCTACACTATCTGAGATGGGCATCAACAAGAGTCGATGTGATGAAGCAACAGATAAAATAAAGGAAgataattcaaaaacaaacgaatTGAAAGACCTTATAGAAAAATATGAAGAAACCAATGTAAAAATCAACAAGATATGTGAAGAAAAAGCTGATGCTCTTGAGATTGTCCTTGCAACGATTTTATCTGGTACAACCGTTGTAGCTGCTGCATACGCTGTCAAGGGCGTGTGCACAGGTATGAAAACCGCAAAGGCCATCAAAACAAACGCAGAGATGGCCAAAAGGGCCATGGAGCTAACTAGACTATCAAAGTTGGCTCGAAGCTCTGTTCGTGATGTTAAGAACGTGAAGCAGCTATTTCAAGGATCAGCTGCAGCATTATCAAAAACGGGCAGATTGGTCAGCGGGGTGTTCAGTGTCGTTTTCATCGGACTTGACATCTGGTCAATCGTCACAACGTCACAAGACATTGACAAAGGCTCCAAATCCCAAGCAGGAAAGAGTTTGCAAGAAAAAGCTGACGCACTTCAACGTGAAGTAGCTGAAATGGATAAGATCTTGAAACCCCTCCTTTAGTACTGATACTTGgtattttattacaaattatcAAACGAATTGTAGAAGTAATATCATAGGATTTTTTTGAACCTACGAATGGTAGAAacttttaatgttttttgttttgttttcttgagagaaatcaaatcaattttggattcaatgtttgaattatcaaatgtatTGCAtgtatatacagctattcttgaaaatgttgtccagttgaaatactgatttagcgaacaacaatgtcatttgcataaatcaagttttcagttttcttgttttaactacaaagctgcacatatttgATATAGCTACAAAGTTTGTCATAATTATgcgatgaagttattttgttcattttgactTATCAtgtcttaaaaaataaaaaatcatgagatatgcaaatcacattgctattcgctaaatcagtaatTAAACTGGACAACAATTTCAAGATTAGCTATATGTTATTGGTATGATTTCTTCatcctttttttaataacaagCAAATATGACATGCTGCTCTatctttgattaaaaaaataacggttattttttttaatcttacAATTTTATATCTGTAATGTAAGACGGTATTATTTTCATGTTAACATTTATGTCAGGTGTGAGAACTTTCCCACGAGGTTCCTGATAAAAGAGGTTTCATCAGGACGTTCTAgtttagttaaaaaaatacaatacaagtACTTGGAAGCTCATTAAAGATCTAGTTCCAAAGTGGTTGCTGCGTCCTTAATAGTAAAAATTGTGGAGATTAATGCTTCGATTTTgatctgatttttttaaactaagtgttatttggccgagatattttagtgtaataattattcaaatcagGAAATATTCTTTATCGGATTTACAGATCGCTTTACAGATTAAGAATAgtcatcgcgcagaatgctattgttttcagggacatttacttacggtgctaaattattcacattaggcataaatatgaataaatcagtgtgattaaagattgtgttgtca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04888	SseC	Secretion system effector C (SseC) like family	Family	Interproscan
PF05461	ApoL	Apolipoprotein L	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006972	Domain	Translocator protein BipB-like, C-terminal domain	Interproscan
IPR008405	Family	Apolipoprotein L	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14096	APOLIPOPROTEIN L	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0042157	Biological Process	lipoprotein metabolic process	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14480	APOL; apolipoprotein L	-	Signaling proteins	-	deepkoala