Gene detail

Detailed information of ENSDLIP00000024348.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: PIK62037.1, putative epidermal growth factor-like protein 8-like [Apostichopus japonicus]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000026955

GTCCTTTGTGAGGTCTCAAAGTATCTAATTCAACCTCTCTTTTCCGGCTAAGGACAGTTAATAAAGGCTCAGCTTCGTTCCTCGCTACTACTATTTAAAGGCAGCTCAGGACACTTTTGGAATACTCAACATACTGATCCATACTCTTTTACGTAGACATAGCTACTTATCAATCTGAAGCTTTCTAATAACTTTActtcaatcaataatttttgcGGACGTAAGAACCGGATCTTTAGTAATATTCCAAGTGCATTTCCTTACCGGCGAAGCGTCAAGTCTGCTCTGGAGGGTTATTTATGTCTTCTGTGTTCAATATATTTCGGTTGCGGGTTGCAATGTTAACATTGATACTATGTTGTATGTTCATCGTGGTGGCTTGGTGCAAAGATGAAGCGGTACTGGGACCTGGGGACAATGTATGTATGAAAACACGATCTGTAGTGAGGTATTATACAGCTACACAGCCTTATGCAGAACCTATGTACAAGCCATATCTAATACCATGTAACAAGTGGACTAAAACGATGTGCTCGTCTTATAAaacattttacaaaagaagTTACCGTCAAGTTAAACTAAGTAAACTTGATGTAGAGACATTCTACGACTGCTGCCATGGGTGGCAAAAAGATCACAAGTCGAACCAATGCAACATCCCTATATGCAGCAAGCCTTGCAGAAATGATGGTATATGTACCAAACCCGATTTATGTTTGTGTAAACAGGGATGGACTGGCCGTGACTGTGGAGAAGATATAAATGAATGTGCGAGAGAAAATGGTGGATGCTCACAGATCTGCGTTAATACTTATGGCAGTTATAATTGCACTTGTTTAGACGGGTATATCGCTAAAGGAAAGGACTGTGAAGTCTGTCTAAGATGCAGCAAAGAGTGGAAAGCTATGGAAAAGAAGCTACGCAGACTAGAAAAGGAACTGACAATTTTGAGAAAGCAGATGATATCGTTCAAGGGAATACGTATGTCACATGGTGTGCAAGACGTAGAAGCTTTACGAGGACCTATTGGTCCTAAAGGAGACAAAGGTGAAAAGGGACAGCGAGGATCACCGGGCCCACCAGTGGAGGTTCTCACATCAGTGATTGGTCGATTAGCCCACTTTGAAGATTACATCCAGCGATGTCAGTGTGTAGAGAAGCAAAAGAATCAAGAGAAAGAGATCAATGTCAAAGAACATGCTGTTCCTATCAATCTTGGCTAAGTTGACAACCTGACCAAGCTGATAGCATGTGCGTGCCATTGAACTTCATGCTTATAGATGGCTTTCAATCCTTCTTGACGACAAGGGCCACGGTTATacgcatgaatgaataacagGACATTCCTACATGAAATTGCTCCAAATTTTTGATATCTTATTTAACTTTCTATTCTACAgctaattattttttttgtcagagTTGTTGGTTATATTCATTCTTAAATGTCAGGGGCGTTGGCTTTAAAAGTAAATCGATGTCGTGCAGCGCGGTGATTATAACCCTTTCTTTCGCAAATCGTTCGTCAAAGATTACTGTTTTGGTTGTTCAACATAAAAGATATTGGCTCGAAGTATTAACTGTTAATAATCGTTTGGACAAATATACTTTCTGCTTATCAATATCGCATCCTTTAAGCCCACACAGTTCGTGTCTCGTCGAAAAACACTGTTCCGCTAGAGTTGATGAAGCTACGCTCTCATTCATGCGTGCGTACGTCAATGTGCTCGCTACGCACCGTTGCCAGTCTTATTGATAACTAGCACTTAGAGTATAGATGCTAAAGGCTATGTTTAGAGATTTTAGACAATTAGGAAATAACGCGTCCTGTTGTCGCCTTTGTGCTTCTTTAAAGCAAGTCGACCTTCTCATTCCTATGGAATCTTTTGACTTCATCCAGCCATCAAATTGATCGTTCAGTCAGTCTTGTATAAACTTTGgctgtttttcaaaattgtaacCATTTAGTTAAACAGCAGCATCTTTGTACAAAAAACAGCTATTACGTTCATACTTGCATCGAATCCCATAGCACCACGTATGATAGTTGATTCTTAGCTAACGAAATCTCAAAGTACTCTATCACGCCATTATAGTTGTACACTAAAGGAGATATTTAAGGGAAGAAATGGCTATTGATAAGTAGTTATATTAGCTCTGCatttaaaaactataaaaagaTATTGTAATGATTTAATGTGATACACGCTAGGAATATTGGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GUQ1	Epidermal growth factor-like protein 8 OS=Mus musculus OX=10090 GN=Egfl8 PE=2 SV=2
Q6MG84	Epidermal growth factor-like protein 8 OS=Rattus norvegicus OX=10116 GN=Egfl8 PE=2 SV=1
Q6UXI9	Nephronectin OS=Homo sapiens OX=9606 GN=NPNT PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000743 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07546 all species →	EMI	EMI domain	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF07974 all species →	EGF_2	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011489 all species →	Domain	EMI domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR013111 all species →	Domain	EGF-like domain, extracellular	Interproscan
IPR050969 all species →	Family	Developmental Signaling Modulators	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14949 all species →	EGF-LIKE-DOMAIN, MULTIPLE 7, 8	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24465	EGFL7_8; epidermal growth factor-like protein 7/8	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.