Gene detail

Detailed information of ENSDLIP00000024420.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020896758.1, serum response factor [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P11831	Serum response factor OS=Homo sapiens OX=9606 GN=SRF PE=1 SV=1
P23790	Serum response factor OS=Xenopus laevis OX=8355 GN=srf PE=2 SV=1
Q90718	Serum response factor (Fragment) OS=Gallus gallus OX=9031 GN=SRF PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008301 (this species only)
Transcription factor family	SRF · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00319 all species →	SRF-TF	SRF-type transcription factor (DNA-binding and dimerisation domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050142 all species →	Family	MADS-box/MEF2 Transcription Factor	Interproscan
IPR036879 all species →	Homologous_superfamily	Transcription factor, MADS-box superfamily	Interproscan
IPR002100 all species →	Domain	Transcription factor, MADS-box	Interproscan
IPR033897 all species →	Domain	MADS SRF-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48019 all species →	SERUM RESPONSE FACTOR HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0000987 all species →	Molecular Function	cis-regulatory region sequence-specific DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000024420.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.