Gene detail

Detailed information of ENSDLIP00000025879.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020900189.1, WD repeat-containing protein 74 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000028638

CCACAACAACGAAATGTTCTCTCACCCTCCCCCCGAGAGTACTACTTTTGagatattcattcattttccaaTCACCAAAGTTACTAAGACAAAATGGCGGAAGAATTCTACTCCGATGTTTTTGTCGGCAGCGATGTAGGCTATCTTAAAGcggttgatttaaagaaaaattcgTTCAATAATGTGACGAAACCGTCCAAAGAGACAGCTGACTCAAAGATTGAAGAAATATGTGTAATGTGCTGGAAGAATGAAGACAAAAATCAGATGTTAGTTGGACTACGGAATGGACTTGTCAAAACCTATGATGTAGAACAGAGTACATTTATTGATCAAAGAGACTGTGATGTCAAGGATAGTCATTTTACAGGATTATTCTGCTATAACAGATCATCAGTAACGTGCACAGAATCTGGAATAATAAAAGTGTGGCCAGAAAATGACCCTCCTCTTGAAGTCAGGGTTGGTAATCACATATCAAGAATGCGTTATAACCGTCAAAGTGAGAATATTGTTGGAACTGGTGGGAAGGAGAATGACCTGAAGTTATGGGATCTTGAAAAATCTGgagaaaatatattcaaagCCAAGAATGTGAGAAATGATAAACTGGACCTTAGAGTACCTGTATGGGTGACTGATCTAGGATTCCTACCGTCTGCTGGTTTATCTAAAGTTGTCACCGGCACAGGCTACCATCAAATACGTCTTTATGACACTGCTGCCAAGAAACGGCCAATGATGTCCATTGATTTTGAAGACTGTCCTGTTACTGCATTGTGTGTCACAGATCAAGAAAATACTGTTATTGTTGGGAATGCAGTAGGAACAATGTCAGTTATTGACTTGCGTAAAGGTCAAGTAGTTGGAGGCTATAAAGGGTTTGCAGGAAGTGTGCGCTGTATAGAGCACTGTGAAGAGACAGGTCAAGTTGCAGCCTGTGGCTTGGATAGATTTCTTCGTGTTTATGATTGCAAATCAAGAAGTTTGCTACAAAAGaTTTACCTCAAAACAAGATTGAactgtttattattttcaaataccAGAAACCAAAAGAAGGAAGCATCACTTCAAGAAAGTGAAGAAACtgtacaagaaaacaataatttaagaaaaagggaaagaagtgataatgatgatgaccatgatGAATTATGGGATAGCATGGAAGTTATCAAAACAgaaagttttaaaaacaagaaaaagttgaaaaagGATTctacaaaaagtaaaaagacaaaaaagaacaacaaatcataattaaaatgaagtgtattttcaataaattttaataaacatACTCCAGTGGtgttaaatttaatatttgtaatgtGCAGTTGTGCTCTTAGTCATAACAggaataaaatattatgaaaattaaatgGAATTTATGTACCTCCTATCATAGTTCCAGGGACATTTTTTTACTCTTCTTTTAACTGTTCACAGCAAGCAAAGCTTGTCAATTTTAAAGAAGAACAAGCCTTTTGAATACTATGGTAATGATTTTCATGTTAGTGAATCTGATGTCAGTCATTTTACAACCATGTCATAACTTCATTTTGCTTCTGTTGTCTCTGGACAGTTCAGTTATTTTCTGGGAGCCGCTTGTTTCAAATCAACCAATAACAGAACATGTCATAGCAAGTTTCACTCAGGTGGAGTTGAAATTGGTTTAAAGATATATAGTAAATCAAATCGCATTTTCATAGTGCTAAAGGGGTGAATTCAGGGGGATGTCAGGCAGTGTCCCACTTGTGGTTTAAGATTCTACTTATTAAAAGCAATCTTTAAATGGCACAAACGTTATTTTACCTTATGGTAAACGAACTACCAGCATTTAATACATAGAGGATAGTACATTGGGCGCACGGAGATATGAAATTATGAATACGTATGTTcctaaattatcatttagaaatgaaaagaaagaaacaaatatcTTTGAgtgttgaaaaatatatattttcaacacgagaagataaattTCCTATCTCCAAGTgaccatgtaatattctgtttatcataAGATTATCCATAAATCAACTTcatacaatttttatttttatataattaaagGCATAACCATATAATGATATTTTCACGTGTCattaacatgttattttcacatgtgaacatatcagtttttaaaaaaaacgataaatattggtattttatggATAATTATGTGATTAGTTTATCTTTAACGTTTAGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q58D06	WD repeat-containing protein 74 OS=Bos taurus OX=9913 GN=WDR74 PE=2 SV=1
Q6RFH5	WD repeat-containing protein 74 OS=Homo sapiens OX=9606 GN=WDR74 PE=1 SV=1
Q8VCG3	WD repeat-containing protein 74 OS=Mus musculus OX=10090 GN=Wdr74 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006063 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

No Pfam domain signature was detected for ENSDLIP00000025879.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR037379 all species →	Family	WDR74/Nsa1	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16038 all species →	NOP SEVEN ASSOCIATED PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0030687 all species →	Cellular Component	preribosome, large subunit precursor	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14841	NSA1, WDR74; ribosome biogenesis protein NSA1	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.