Gene detail

Detailed information of ENSDLIP00000025965.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020915523.1, adhesion G-protein coupled receptor F1 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P13608	Aggrecan core protein OS=Bos taurus OX=9913 GN=ACAN PE=1 SV=3
Q29011	Aggrecan core protein OS=Sus scrofa OX=9823 GN=ACAN PE=1 SV=4
P07897	Aggrecan core protein OS=Rattus norvegicus OX=10116 GN=Acan PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001020 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00057 all species →	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF00059 all species →	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002172 all species →	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR036055 all species →	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan
IPR001304 all species →	Domain	C-type lectin-like	Interproscan
IPR050685 all species →	Family	Low-density lipoprotein receptor	Interproscan
IPR016186 all species →	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR023415 all species →	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24270 all species →	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000025965.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.