Genomic Location: not available for this species
NR annotation: XP_020910298.1, endoribonuclease Dicer [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families
| CDS |
| ENSDLIT00000029123 |
| Transcript |
| ENSDLIT00000029123 |
| Protein |
| ENSDLIP00000026287.1 |
| UniProt accession | Description |
|---|---|
| Q25BN1 | Endoribonuclease Dicer OS=Gallus gallus OX=9031 GN=DICER1 PE=2 SV=3 |
| B3DLA6 | Endoribonuclease Dicer OS=Xenopus tropicalis OX=8364 GN=dicer1 PE=2 SV=2 |
| A0A8J1LLF7 | Endoribonuclease Dicer-S OS=Xenopus laevis OX=8355 GN=dicer1.S PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006466 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20931 all species → | Dicer_platform | Dicer, platform domain | Domain | Interproscan |
| PF00636 all species → | Ribonuclease_3 | Ribonuclease III domain | Family | Interproscan |
| PF02170 all species → | PAZ | PAZ domain | Domain | Interproscan |
| PF20932 all species → | Dicer_dsRBD | Dicer, dsRNA-binding domain | Domain | Interproscan |
| PF03368 all species → | Dicer_dimer | Dicer dimerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036389 all species → | Homologous_superfamily | Ribonuclease III, endonuclease domain superfamily | Interproscan |
| IPR048512 all species → | Domain | Dicer, platform domain | Interproscan |
| IPR038248 all species → | Homologous_superfamily | Dicer dimerisation domain superfamily | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR000999 all species → | Domain | Ribonuclease III domain | Interproscan |
| IPR003100 all species → | Domain | PAZ domain | Interproscan |
| IPR005034 all species → | Domain | Dicer dimerisation domain | Interproscan |
| IPR044441 all species → | Domain | Dicer, double-stranded RNA-binding domain | Interproscan |
| IPR036085 all species → | Homologous_superfamily | PAZ domain superfamily | Interproscan |
| IPR014720 all species → | Domain | Double-stranded RNA-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14950 all species → | DICER-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004525 all species → | Molecular Function | ribonuclease III activity | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0016891 all species → | Molecular Function | RNA endonuclease activity, producing 5'-phosphomonoesters | Interproscan |
| GO:0030422 all species → | Biological Process | siRNA processing | Interproscan |
| GO:0031054 all species → | Biological Process | pre-miRNA processing | Interproscan |
| GO:0004530 all species → | Molecular Function | deoxyribonuclease I activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006309 all species → | Biological Process | apoptotic DNA fragmentation | Interproscan |
| GO:0016442 all species → | Cellular Component | RISC complex | Interproscan |
| GO:0090501 all species → | Biological Process | obsolete RNA phosphodiester bond hydrolysis | Interproscan |
ENSDLIP00000026287.1.
