Gene detail

Detailed information of ENSDLIP00000026726.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020896176.1, serrate RNA effector molecule homolog B isoform X3 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000029629

atgcaGAAAGCTGTGAGAAAGAGGGTTTCTATCTTTCTTGAGCTTATGAAGTCTGGGCGTGCTGATTCTTTGCTGTTAGACATGGAGCatgctgatgatattgtgAAGCTTTTGGATGCTGttgtgaTCAAGCTAGAGGGTGGCTCAGATCTTGACCTATCCATTCTTGACCGCTCGCCCTCGCCAGAAAGAAAGCCAGATGAGAAGGAAGCTGAGTCATCAAGACGAGATAGAAGGAAAGAAAGTACTAGGTCACAATCAAGTTCACCATCTCGCTCTCCTGCAGCCAGAAAGTCTACTGATAAAAAAGAAAGCAGTGAGGTGATTGCACCAATATCTCCATCGTCAGTTCCCCTGCCAGATGCCCCACCACCTTCAAGTCAACCAAACGTTGAAGGCTCCGATGCCAAGCCACTGACTATGCCTGAACCTACACCTGAGCAGAAGCAATTACAGCAAAGAGCACAGCATTATCACCAACAAAGCCAGCAATACCAACAGcAGATAGCAGGACAGTCAGGGCAGCTTGCACAAGAAGATCAAAAGCCAAGTAGTGGAAAGGTGGAAACTGGTAAAAAGCGCCGTAAACACCGCCACCGTGAACCCTACTACTATGATGCCATGGAAGATGACAGTGAAAGTGATTCAAACTCTGAATCAGACACTGAACCAGCACCACCTGGTGAGGAAGCAGTGTCAAGTGAAACTAAGGAAGAACAACTCTTACCCCCTGGTGTAGAAGCTCCTGTATCTACTGGTGATGCAAGTATTCAGCTGCCAACAAGCTCATCAGGAACTGATAATGTTGTCAAGCCAGTTTCTACCAAGCCTGAAACTGATGAAAGTGCAGTTGGCTCCAGTGAATCAGAGACAGTCAGTAGTCAAGAAACTGGAAAATCAACTAAGCCAGACCAGCCATCATTGGATGATGCTGCAATTGACTCAACTCAGAGCCCAGACCCCAAGAAACCATCAGAAAGTCCTGACCAATCAGAGCAGAGTATAAAGAGGGAGACTGGTGACCCACAGGTTGGGAGTACAgtcaataatgataatgatgatagtaacaGAGTCAGCAAGGATGTAGAAATGGAGCCAGCATCATCTAGTGAAGCAGAACGAAGAGCATCTAGTGAAGAACAACCAACTAATGATGTGAACACACCAACCACTCCAGTCACACCTGATGTCAATAAGAACCAGAGTGAGGTAATTGATTCCAACAAGCTTGCTGAAAAGAAAGAAGCCAAAGAAGAGGACAGCCCCATGAAGACCACACCATCAAAAGAGTCAAAAGAGAATGCAAtagaagaaaaagagaaagattCTGCTGAGGAAGGAGAGCCAGCTAAAATGGAAATTACACAGTCACCCGAACCAAGGCCATTACACAAGACATATTCACTGTTCATGAGGAATATTCCACCAAATATATCAAGAACAGATATTGCTGCAGTGTGTAAGAGGTTTCCTGGTTTTCTAAGAGTTGCTCTCTCTGACCCAAGTCCTGAGAGAAGGTTTTTCCGTCGAGGCTGGATTACATTTCAAAGGAGTGTCAACATCAAAGAAATCTGCTGGGATTTGAACAACATCAGGATTAAGGATTCTGAGTTGAATCCAGTAGTCAACCGTGATCTGTCACGGCGTGTAAGATCTGTGAGTGGAATCACCTTTGCCAAGCCTGTGATTAGAGAAGACATCAAGCTAGCTGCTCAGCTTGTACGAATTCTGGATAAAAAAGCAGCAGTCTACgagaaagagaagaaaacaGAAGAGACCAATGGAGctgagaaagaaaaggaaacaGAGAAAAAAGAGGAGAAAGAAGAAGGTGAAGAAGGAGTTTCAGAAGAAAAAGAATCAAACCTTAACCTACCAGACACCAACCCCATCCTGGCATCGCTGTCAGAAGATGCtacagaagaagaagaaggagaagaaatGGAATTACTTGGAACCTCTGGCTCTAACAAAGACCAAACTGACCAATCAGGGATTGATTTGACAGTTGATGTTAACTTACTACGTGTTTTAGATAGGTTGATCTTATATCTACGGGTTGTTCACTCAGTGGATTATTACAATGGGGGTGATTATCCTCATGAAGACGAGATGCCTAATAGATGTGGCATTGTACATGTTAGAGGATCTGCACCAGAAAAAGCTACATTATCTGAAGTTCAAGATTGGCAGAAATCTTTAAAGCAAAAGCTAGATCCATACATGGAAGATAAAGAACCTCTCAGCGAGGAGGAAGTGGCTACACTAGGCAAGAAAGATCCTGAAGCTGAAGTTGAAAAGTTTATTGAAGCCAACACTCAGGAGCTTGCGAAAGACAAATGGCTATGTCCGCTCAGCGGGAAGAAGTTCAGAGGACCAGACTTTGTCAGAAAGCACATATTTAACAAACATGGTGAAAAAGTTGAGGCTGTCAAGCTTGAGGCAGAGTTTTTTAACCGCTACCTTAGTGATGCCAAGAGACCACAGGATCCTgaaccaaccaatcaaaaacatgCTGGTGCACAGGGACACCCTGCAGGTCCGATGTATGGAGGACAACAACATGAGGGCGGGCAAGGCATGGTGGGATGGGGTCCTAGACCTCATATGATGATGTATGgTCCAAGAGGCCCATACACTCCACATACCTTTGGTGGATTTGGTCAAGAGGGTTATGGTAGAGGGGCATCACATACCTTTCCCCCTAAACCAAGGAGATTTGGAGATGGTGGTGGTCGTGGTGGTTTTAGACAGCAGGACAGGGGATTTCCACGAGAACAAAGACAGATTGTCCAATATAGAGATCTAGATGCACCTGAAGATACAGACATGTTTTAA

Transcript

ENSDLIT00000029629

CTAGGTTTTTTGGCTCTAAATTTGAGCTTTTCAAGCCACAAGGCTTTTTGACCAGTTTTAGTTTCACTTTGAAGTATTTTGTGTGAACAAGAAAGATTGTGTAATCGGCTTAAGGTTCTCGCAACTCCAGGTTTAGAGTCAAGTACCACCCTAAAGAAGCatctttaaaacaaaaagaaatgcaGAAAGCTGTGAGAAAGAGGGTTTCTATCTTTCTTGAGCTTATGAAGTCTGGGCGTGCTGATTCTTTGCTGTTAGACATGGAGCatgctgatgatattgtgAAGCTTTTGGATGCTGttgtgaTCAAGCTAGAGGGTGGCTCAGATCTTGACCTATCCATTCTTGACCGCTCGCCCTCGCCAGAAAGAAAGCCAGATGAGAAGGAAGCTGAGTCATCAAGACGAGATAGAAGGAAAGAAAGTACTAGGTCACAATCAAGTTCACCATCTCGCTCTCCTGCAGCCAGAAAGTCTACTGATAAAAAAGAAAGCAGTGAGGTGATTGCACCAATATCTCCATCGTCAGTTCCCCTGCCAGATGCCCCACCACCTTCAAGTCAACCAAACGTTGAAGGCTCCGATGCCAAGCCACTGACTATGCCTGAACCTACACCTGAGCAGAAGCAATTACAGCAAAGAGCACAGCATTATCACCAACAAAGCCAGCAATACCAACAGcAGATAGCAGGACAGTCAGGGCAGCTTGCACAAGAAGATCAAAAGCCAAGTAGTGGAAAGGTGGAAACTGGTAAAAAGCGCCGTAAACACCGCCACCGTGAACCCTACTACTATGATGCCATGGAAGATGACAGTGAAAGTGATTCAAACTCTGAATCAGACACTGAACCAGCACCACCTGGTGAGGAAGCAGTGTCAAGTGAAACTAAGGAAGAACAACTCTTACCCCCTGGTGTAGAAGCTCCTGTATCTACTGGTGATGCAAGTATTCAGCTGCCAACAAGCTCATCAGGAACTGATAATGTTGTCAAGCCAGTTTCTACCAAGCCTGAAACTGATGAAAGTGCAGTTGGCTCCAGTGAATCAGAGACAGTCAGTAGTCAAGAAACTGGAAAATCAACTAAGCCAGACCAGCCATCATTGGATGATGCTGCAATTGACTCAACTCAGAGCCCAGACCCCAAGAAACCATCAGAAAGTCCTGACCAATCAGAGCAGAGTATAAAGAGGGAGACTGGTGACCCACAGGTTGGGAGTACAgtcaataatgataatgatgatagtaacaGAGTCAGCAAGGATGTAGAAATGGAGCCAGCATCATCTAGTGAAGCAGAACGAAGAGCATCTAGTGAAGAACAACCAACTAATGATGTGAACACACCAACCACTCCAGTCACACCTGATGTCAATAAGAACCAGAGTGAGGTAATTGATTCCAACAAGCTTGCTGAAAAGAAAGAAGCCAAAGAAGAGGACAGCCCCATGAAGACCACACCATCAAAAGAGTCAAAAGAGAATGCAAtagaagaaaaagagaaagattCTGCTGAGGAAGGAGAGCCAGCTAAAATGGAAATTACACAGTCACCCGAACCAAGGCCATTACACAAGACATATTCACTGTTCATGAGGAATATTCCACCAAATATATCAAGAACAGATATTGCTGCAGTGTGTAAGAGGTTTCCTGGTTTTCTAAGAGTTGCTCTCTCTGACCCAAGTCCTGAGAGAAGGTTTTTCCGTCGAGGCTGGATTACATTTCAAAGGAGTGTCAACATCAAAGAAATCTGCTGGGATTTGAACAACATCAGGATTAAGGATTCTGAGTTGAATCCAGTAGTCAACCGTGATCTGTCACGGCGTGTAAGATCTGTGAGTGGAATCACCTTTGCCAAGCCTGTGATTAGAGAAGACATCAAGCTAGCTGCTCAGCTTGTACGAATTCTGGATAAAAAAGCAGCAGTCTACgagaaagagaagaaaacaGAAGAGACCAATGGAGctgagaaagaaaaggaaacaGAGAAAAAAGAGGAGAAAGAAGAAGGTGAAGAAGGAGTTTCAGAAGAAAAAGAATCAAACCTTAACCTACCAGACACCAACCCCATCCTGGCATCGCTGTCAGAAGATGCtacagaagaagaagaaggagaagaaatGGAATTACTTGGAACCTCTGGCTCTAACAAAGACCAAACTGACCAATCAGGGATTGATTTGACAGTTGATGTTAACTTACTACGTGTTTTAGATAGGTTGATCTTATATCTACGGGTTGTTCACTCAGTGGATTATTACAATGGGGGTGATTATCCTCATGAAGACGAGATGCCTAATAGATGTGGCATTGTACATGTTAGAGGATCTGCACCAGAAAAAGCTACATTATCTGAAGTTCAAGATTGGCAGAAATCTTTAAAGCAAAAGCTAGATCCATACATGGAAGATAAAGAACCTCTCAGCGAGGAGGAAGTGGCTACACTAGGCAAGAAAGATCCTGAAGCTGAAGTTGAAAAGTTTATTGAAGCCAACACTCAGGAGCTTGCGAAAGACAAATGGCTATGTCCGCTCAGCGGGAAGAAGTTCAGAGGACCAGACTTTGTCAGAAAGCACATATTTAACAAACATGGTGAAAAAGTTGAGGCTGTCAAGCTTGAGGCAGAGTTTTTTAACCGCTACCTTAGTGATGCCAAGAGACCACAGGATCCTgaaccaaccaatcaaaaacatgCTGGTGCACAGGGACACCCTGCAGGTCCGATGTATGGAGGACAACAACATGAGGGCGGGCAAGGCATGGTGGGATGGGGTCCTAGACCTCATATGATGATGTATGgTCCAAGAGGCCCATACACTCCACATACCTTTGGTGGATTTGGTCAAGAGGGTTATGGTAGAGGGGCATCACATACCTTTCCCCCTAAACCAAGGAGATTTGGAGATGGTGGTGGTCGTGGTGGTTTTAGACAGCAGGACAGGGGATTTCCACGAGAACAAAGACAGATTGTCCAATATAGAGATCTAGATGCACCTGAAGATACAGACATGTTTTAAACAAGTCTCCACTCTCCTAGAACTCTAATATATACGCATAGCTACCGCAACCAGTAAAATAGCAGTTTTTATGGACAAAATGGTCACTTCTATGGCGTCCTTTAGTCGGCTAGTTTATGAACCATATCAGTAAAATTTCAGCTTCTAAAGCAAACGAATCACTATAGAACAATGAACAATGTAAAGCTATTAGTAAACTTCTTCTGTGATAACATCTATAGCTGGCTCAGCTGTTCACCATTTGATGTGATAATTAATGTAAATTGGAGTTTTTTAAGTTTCAATGTGAAATAGAACAAAACACTACTGATAACAGAGTAGTTCCTCTGATTAAGGCTGGACCAAGCGTGTTTTTAACTAGTAAAAGTGAATTGTGAATAATAAATTTGTTGTCTATGTTAATTGCGATGGTCGAGACGTGCGGTAGAGGTAGCTTAGTAACAGTTGCTAGGGATTGCATTTGAGTAGGTGGTAACTTAGCAACAGTTGCTAGGGGTTGCATTTGAGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q66I22	Serrate RNA effector molecule homolog OS=Danio rerio OX=7955 GN=srrt PE=2 SV=1
Q6INH5	Serrate RNA effector molecule homolog B OS=Xenopus laevis OX=8355 GN=srrt-b PE=2 SV=1
Q99MR6	Serrate RNA effector molecule homolog OS=Mus musculus OX=10090 GN=Srrt PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002648 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04959 all species →	ARS2	Arsenite-resistance protein 2	Family	Interproscan
PF12066 all species →	SERRATE_Ars2_N	SERRATE/Ars2, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039727 all species →	Family	SERRATE/Ars2	Interproscan
IPR007042 all species →	Domain	SERRATE/Ars2 , C-terminal	Interproscan
IPR021933 all species →	Domain	SERRATE/Ars2, N-terminal	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13165 all species →	ARSENITE-RESISTANCE PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006397 all species →	Biological Process	mRNA processing	Interproscan
GO:0016604 all species →	Cellular Component	nuclear body	Interproscan
GO:0031053 all species →	Biological Process	primary miRNA processing	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000026726.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.