Detailed information of ENSDLIP00000026748.1 in Diadumene lineata

Genomic Location: :...
NR annotation: XP_028513750.1, probable ATP-dependent RNA helicase DHX58 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BYX4Interferon-induced helicase C domain-containing protein 1 OS=Homo sapiens OX=9606 GN=IFIH1 PE=1 SV=3
Q96C10ATP-dependent RNA helicase DHX58 OS=Homo sapiens OX=9606 GN=DHX58 PE=1 SV=1
Q8R5F7Interferon-induced helicase C domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ifih1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan
PF16739CARD_2Caspase recruitment domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR031964DomainCaspase recruitment domainInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR001315DomainCARD domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12646RIGI, DDX58; ATP-dependent RNA helicase DDX58EC:5.6.2.6
Pattern recognition receptorsko04054deepkoala

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