Gene detail

Detailed information of ENSDLIP00000027893.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020906766.1, ER degradation-enhancing alpha-mannosidase-like protein 3 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

ENSDLIT00000030891

ATGCTGAACACAAGTTGTTTAGGAGTTGTTTGGGTTCCGCTTTTGGTGGCAGTTGTTGTGGTGTTTTGTTCTGAGTCCCAAGCAATGTCTcttgaagaaaaacacaaattaagGGACCAAGTGAAAGAAATGTTTCATCACGCTTATGGCTCTTACATGAAATATGCATATCCAGCGGATGAGTTGATGCCGTTAAGTTGTAAAGGGCGTGTGCGAGGAGTAGATCCTAGTCGTGGTGATGTAGATGATGCATTAGGAAAATTTTCATTGACTCTTGTTGATACCCTCGATACACTTGCTGTTCTTGGTGAAGTAGAAGAGTTTGAGAAGGCTGTCAAACTAGTCATCAAAGATGTCCAGTTTGATAGTGACCTTGTAGTATCAGTCTTTGAAACTAACATTAGAATGGTGGGTGGTCTTTTGGGTGGTCATGTAGCAGCAGTTGCCCTTCAAGCTATGGGTAATGGTATGGAATGGTATGCCGGTGAACTACTAGAAATGGCTAAAGATATAGCTAATCGTTTACTGCCAGCATTCAACACAACTACAGGAATACCATACCCTAAGATAAACCTCAAGTACGGCATCCATCATCCAGACTCTGGTACTGGTAGTGAAGTAGACACCTGTACTGCATGTGCAGGGACTATGATCATGGAGTTTGGTGCTTTATCAAGACTTACAGGGGACCATATCTATGAGgAGAAAGCAGGTAAAGCTATGGAGTCGCTATGGAGTTTTAGAAACCGTGGTTCTGATCTAGTTGGAACTGTTATAAATATACACAATGGAGACTGGGTCAGAAGAGATAGTGGCGTTGGTGCTGGTATTGACTCCTATTATGAATACTGCTTGAAAGCTTACATTCTACTTGGCGATCACACCTACTTGGACAGATTTAACAAACATTACAAGTCCATCATGCAGTATATCAACCAAGGAGCCATGTTCTTCAGTGTTCAGATGCATCAACCAGAAAGAACATCACATTCTTACATGGATGCTTTACAGGCATTCTGGCCTGGATTACAGGTCCTTAAAGGTGATCTCAAGAAAGCAATAGAAATGCATCACATGTTGTATGAAGTAGCAAAGAAACATACTTTTCTGCCAGAGGCTTTTACCATGGACTTTGAAGTCTATTGGGGTGAACACCCTCTACGTCCAGAGCTTGTTGAAAGTACATACTTTTTATATGAGGCAACAGGTGATCCACACTATCTAGAAGTTGGTAAGAACATCATAGAGAAAATTAATGAACATGCTAGAGTTCCATGTGGCTTTGCTGCACTTAGAGATGTCAGGACATTAACACATGAGGACAGGATGGATTCATTTGTGTTGGCGGAAACCTTCAAGTACCTTTATCTGCTGTTCTCAGAAACATCAGAGCATGTTCtaccaatgaatgaattcatCTTTACAACAGAGGCTCACCTCTTACCACTAAGCCTATCTACTCTACCAGCTAACAAAACAGCATATCAGCAAGTCCGCTATAATGTAACTATCAGTGAAGAGAATGAGCATGAATACAGCTGCCCAAACACTGGTCATTCCCAAGATAGATTAAACTATGCTAAGGACATCAGAAATAAAGTACTGCTCAAGTCTCAAAGTAGCTGTCCTACCAAGAAATCTTTTGCATTCACCACTAACAAACCTCCAAGGCTGAGAGCAGAGCAGTTTGTTCCTGGTAATAAAAACCATCTAGAGATTCTCAAGTCCATGGGTATCACAGTAGCGCATACTAAAGAAGGCAGGATACAACTGATGCATTCAGCTGCTAATGCTTATTCTCAGTTAGAAGCAGAAGATGGCATCAAGTTTATGCaagaaatgattgaattaGCTAAACAGAGGAATGATGATGCAGGTGCTACTGCCAACCCCCGTGTTGTACAGCTGATGTCTCCACCGTACAATGGCAGTATTGTGTTGAGTGCAGGACCTGCACAGTTTGGTCTTGACTTAAGCAAGGGCGATGTAGGGGTTGGTGCAGAAGTAGTTATTGGAGAGCCTTTCAAGGGCTGTGCTTCATTTACCAATGAAGAGAATGTTAAGCATAGAATTGTTGTTGTAGAACGAGGTGACTGTATGTTTATTGACAAGGTGCGTATTGCTGAAACAGCAGGCGCAGTAGGAGTCATAATTGTTGACAATAATGATGGTAGTTCTAGTGATACACAACCAATTTTTGCCATGGCTGGTGATGGTACAAATAATGATGTCAAGATACCTGCTGTTTTGTTATTCCATCAAGAAGGCTTGATATTACAAAGAGCTGCCACTTCTCTAAAAGATAAAGGACAGATCCTTAAAGTGAGAGTAGCTGCGAAAGCTGCAGGTTCAgcttcaaagaaaacaagttCTTCTGAATCTAAAGAAAAGGCATCTCAAGTGAAAGAAGACACAACTGTTACAGAAGGAAAAGAGAACATTGCAGAGGACcaagaagaagaggaaaatATTAGAAAATTAATGTTTGAACTTGAGAAACACTCAATGGTGTTCAATAAAGAAATGCTGAAAAGACTAGCAAAAACTATGAAGGAGTTAAAAACCACTGATACCGGTGATGGTAAAAACAGTTACgacaaattaaaatcaaagatAATTACgttaaaaaacaatgaacTGCTCTGTGCAGCAACAGGCAAGCCCTGTCTTAAAGAAGACCTTTTGAAGGagataaacaaagaaatagatAGCACAAGTACATCTGAAAACCAAGAAGAAAGCTCAAGTATACAACAACAAACTAATACTCAACAGCAGACTCcatcaaatgaaaaatcagATGAATAA

Transcript

ENSDLIT00000030891

GTATTGACGTCACTGCCACGAATGCAAAATGGCGAGATATAATGAATGCCATTAGGAAAGGATGCTAGTTTTTTTCAGCAAAAATGTACTCTTTATAGCCAGGAACACAAAAAATCCATCGGCTTTACGCCGCCTTTGAGTGATATTGCTCTTCTATACAACTTTTGCTGTTCAAAATGCTGAACACAAGTTGTTTAGGAGTTGTTTGGGTTCCGCTTTTGGTGGCAGTTGTTGTGGTGTTTTGTTCTGAGTCCCAAGCAATGTCTcttgaagaaaaacacaaattaagGGACCAAGTGAAAGAAATGTTTCATCACGCTTATGGCTCTTACATGAAATATGCATATCCAGCGGATGAGTTGATGCCGTTAAGTTGTAAAGGGCGTGTGCGAGGAGTAGATCCTAGTCGTGGTGATGTAGATGATGCATTAGGAAAATTTTCATTGACTCTTGTTGATACCCTCGATACACTTGCTGTTCTTGGTGAAGTAGAAGAGTTTGAGAAGGCTGTCAAACTAGTCATCAAAGATGTCCAGTTTGATAGTGACCTTGTAGTATCAGTCTTTGAAACTAACATTAGAATGGTGGGTGGTCTTTTGGGTGGTCATGTAGCAGCAGTTGCCCTTCAAGCTATGGGTAATGGTATGGAATGGTATGCCGGTGAACTACTAGAAATGGCTAAAGATATAGCTAATCGTTTACTGCCAGCATTCAACACAACTACAGGAATACCATACCCTAAGATAAACCTCAAGTACGGCATCCATCATCCAGACTCTGGTACTGGTAGTGAAGTAGACACCTGTACTGCATGTGCAGGGACTATGATCATGGAGTTTGGTGCTTTATCAAGACTTACAGGGGACCATATCTATGAGgAGAAAGCAGGTAAAGCTATGGAGTCGCTATGGAGTTTTAGAAACCGTGGTTCTGATCTAGTTGGAACTGTTATAAATATACACAATGGAGACTGGGTCAGAAGAGATAGTGGCGTTGGTGCTGGTATTGACTCCTATTATGAATACTGCTTGAAAGCTTACATTCTACTTGGCGATCACACCTACTTGGACAGATTTAACAAACATTACAAGTCCATCATGCAGTATATCAACCAAGGAGCCATGTTCTTCAGTGTTCAGATGCATCAACCAGAAAGAACATCACATTCTTACATGGATGCTTTACAGGCATTCTGGCCTGGATTACAGGTCCTTAAAGGTGATCTCAAGAAAGCAATAGAAATGCATCACATGTTGTATGAAGTAGCAAAGAAACATACTTTTCTGCCAGAGGCTTTTACCATGGACTTTGAAGTCTATTGGGGTGAACACCCTCTACGTCCAGAGCTTGTTGAAAGTACATACTTTTTATATGAGGCAACAGGTGATCCACACTATCTAGAAGTTGGTAAGAACATCATAGAGAAAATTAATGAACATGCTAGAGTTCCATGTGGCTTTGCTGCACTTAGAGATGTCAGGACATTAACACATGAGGACAGGATGGATTCATTTGTGTTGGCGGAAACCTTCAAGTACCTTTATCTGCTGTTCTCAGAAACATCAGAGCATGTTCtaccaatgaatgaattcatCTTTACAACAGAGGCTCACCTCTTACCACTAAGCCTATCTACTCTACCAGCTAACAAAACAGCATATCAGCAAGTCCGCTATAATGTAACTATCAGTGAAGAGAATGAGCATGAATACAGCTGCCCAAACACTGGTCATTCCCAAGATAGATTAAACTATGCTAAGGACATCAGAAATAAAGTACTGCTCAAGTCTCAAAGTAGCTGTCCTACCAAGAAATCTTTTGCATTCACCACTAACAAACCTCCAAGGCTGAGAGCAGAGCAGTTTGTTCCTGGTAATAAAAACCATCTAGAGATTCTCAAGTCCATGGGTATCACAGTAGCGCATACTAAAGAAGGCAGGATACAACTGATGCATTCAGCTGCTAATGCTTATTCTCAGTTAGAAGCAGAAGATGGCATCAAGTTTATGCaagaaatgattgaattaGCTAAACAGAGGAATGATGATGCAGGTGCTACTGCCAACCCCCGTGTTGTACAGCTGATGTCTCCACCGTACAATGGCAGTATTGTGTTGAGTGCAGGACCTGCACAGTTTGGTCTTGACTTAAGCAAGGGCGATGTAGGGGTTGGTGCAGAAGTAGTTATTGGAGAGCCTTTCAAGGGCTGTGCTTCATTTACCAATGAAGAGAATGTTAAGCATAGAATTGTTGTTGTAGAACGAGGTGACTGTATGTTTATTGACAAGGTGCGTATTGCTGAAACAGCAGGCGCAGTAGGAGTCATAATTGTTGACAATAATGATGGTAGTTCTAGTGATACACAACCAATTTTTGCCATGGCTGGTGATGGTACAAATAATGATGTCAAGATACCTGCTGTTTTGTTATTCCATCAAGAAGGCTTGATATTACAAAGAGCTGCCACTTCTCTAAAAGATAAAGGACAGATCCTTAAAGTGAGAGTAGCTGCGAAAGCTGCAGGTTCAgcttcaaagaaaacaagttCTTCTGAATCTAAAGAAAAGGCATCTCAAGTGAAAGAAGACACAACTGTTACAGAAGGAAAAGAGAACATTGCAGAGGACcaagaagaagaggaaaatATTAGAAAATTAATGTTTGAACTTGAGAAACACTCAATGGTGTTCAATAAAGAAATGCTGAAAAGACTAGCAAAAACTATGAAGGAGTTAAAAACCACTGATACCGGTGATGGTAAAAACAGTTACgacaaattaaaatcaaagatAATTACgttaaaaaacaatgaacTGCTCTGTGCAGCAACAGGCAAGCCCTGTCTTAAAGAAGACCTTTTGAAGGagataaacaaagaaatagatAGCACAAGTACATCTGAAAACCAAGAAGAAAGCTCAAGTATACAACAACAAACTAATACTCAACAGCAGACTCcatcaaatgaaaaatcagATGAATAAGTGAACAAATTATTAGCTAGTCAATTAGCATTACATATGATTAAGGAATTAACTCTATTGCCCTGTTTTGCTTAAAGATAATGTCtaaaaaagtttttgatttttaatgcTGTCTTGTTAAAAGGCTCTTGTTTGTGCCATTGAATTAAACCATGACGTTCATTAGTGAAACAGGGAAATAGATTTTACATATTAGGAATACATTACCCATGAAATTAccaaattcattcatttgaagAAATCAGAATAATTTATGGGGTGACGGTAGTCAAAAAGGGAAAGTGGAGGAGACAGGggaagggaggggagggagaaACCACAAGTTACAGTTGTTATGAGTCTTCTTAGGTGGTTTTACACATCTTTTAAAACAATAGCTAGTTGTACAAAGTTTGAATATAAACTTACAATGTGATAACTTTAACTGAAGCAATCTCTGGATTTTAAGCCAATCGTGAGACTTAAATCAAGAACACAACTGGATATTTAGCTGAGCCCCTCCCAGTGGGATCCATGTTCCCTTGTTTTATCCCTTGTTTCCCattaatcatatcattatAATTTAGTTCCCTGAAATTCCTAAAACTGttccattgttttttaattttttttttaagtagttCGAAAAAATATCTGACATTCCCTCAGACTCCCTAGCAGTCGGTTTTAGTTTCAGGCACATTCCCGTACAGTCCATGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GQB9	ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis OX=8355 GN=edem3 PE=2 SV=2
Q9BZQ6	ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo sapiens OX=9606 GN=EDEM3 PE=1 SV=2
Q2HXL6	ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus musculus OX=10090 GN=Edem3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005235 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01532 all species →	Glyco_hydro_47	Glycosyl hydrolase family 47	Repeat	Interproscan
PF02225 all species →	PA	PA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044674 all species →	Family	ER degradation-enhancing alpha-mannosidase-like protein 1/2/3	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR001382 all species →	Family	Glycoside hydrolase family 47	Interproscan
IPR003137 all species →	Domain	PA domain	Interproscan
IPR036026 all species →	Homologous_superfamily	Seven-hairpin glycosidases	Interproscan
IPR046450 all species →	Homologous_superfamily	PA domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45679 all species →	ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004559 all species →	Molecular Function	alpha-mannosidase activity	Interproscan
GO:0004571 all species →	Molecular Function	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:1904380 all species →	Biological Process	endoplasmic reticulum mannose trimming	Interproscan
GO:1904382 all species →	Biological Process	mannose trimming involved in glycoprotein ERAD pathway	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10086	EDEM3; ER degradation enhancer, mannosidase alpha-like 3	-	Lectins	ko04091	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.