Detailed information of ENSDLIP00000028280.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020907209.1, probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K4F628S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nsun5 PE=1 SV=2
Q96P1128S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NSUN5 PE=1 SV=2
Q9NAA726S rRNA (cytosine-C(5))-methyltransferase nsun-5 OS=Caenorhabditis elegans OX=6239 GN=nsun-5 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004974 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189
all species →		Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan
PF21153
all species →		NSUN5_NNOL1/NOP2/Sun domain family member 5, N-terminal domainDomainInterproscan
PF21148
all species →		NSUN5_fdxn-likeNOL1/NOP2/Sun domain family member 5, ferredoxin-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049560
all species →		DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR023267
all species →		FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR048889
all species →		DomainNSUN5/RCM1, N-terminal domainInterproscan
IPR001678
all species →		DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR049561
all species →		DomainNOL1/NOP2/NSUN 5/7, ferredoxin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22807
all species →		NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001510
all species →		Biological ProcessRNA methylationInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0070475
all species →		Biological ProcessrRNA base methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDLIP00000028280.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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