Gene detail

Detailed information of ENSDLIP00000028339.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020915336.1, putative E3 ubiquitin-protein ligase UBR7 isoform X1 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000031337

AGTGTGTTGGCGCGCGCCATATTTGTTTTCGCggttttttgcaaattatcTTGATAGCTAAATTTGTTATCTTCTTTCTCTTCAAATCTTGCCCGAAATGGAAGGAGAAACTGGAGATGAAGTAGTCTCAATGCTTGATGTTCTGCAAGAAGATAACGACTTAGAAGAAGAAGCAAATGCCGTTTTAGGTGACAGTGACGATCAGTGTTGCACTTACACTCGGGGATATGTGAACCGCCAGGCTCTATATGCATGCAACACATGTACCCCTACAGAGTCAGCTGGTATATGCCTTGCTTGTTGTCTGACTTGCCATGATGGTCATGATCTCTATGAATTATATACAAAAagAAATTTTCGATGTGACTGTGGTAACTCAAAGTTTGATAGTAACACAAGATGCAAGCTGTACCCTGATAAAGATACTGTAAACACTGACAACAAGTATAACCAGAACTTCAGAGGGCTGTACTGTACATGTCATAAGCCATACCCAGATCCTGATGATGAGATTGAAGATGAGATGATACAGTGTATTATTTGTGAAGACTGGTACCATTCTAGACATCTTGGTGCATTACCTCCTGCAGACTATCAAGAGATGATCTGTGATGATTGCATGAAGAAATGTTCTTTTCTAAAAGCCTATGTACAGCTGTCCGCAAGTAGCCAGTCGAGACTGGGTCAAAGACAACATGTCATTACCAAAGAAGACAAAGATCAAACAGTGGATGTTGGGAAGGAAGACCATGCAACAGGAAACAGTAAAACTGAAAAAGATAATACTAGCTCCTCAGGAGAAAAGTCTGAGgaatCTAAAGCACAAGAGACAAATCATTTGAACAAAGATGGTCCCGATACCTCTAAGGAAAGCTCTTCCACTGCAAGAGAAGAAACCGATGCAACAAAGTGTCAATGCAAACTAACCCAATTACAAAAGACAGTGAAAGAAGACAGTGAATGTACATCGTCTTACTGGAGCCCACGGTGGAGATCAGAGCTGTGTTCCTGTAATGACTGCAAGGAGCTGTACAAGTCCCTTGGAGTGTCTTTCCTATTAGATGATCAAGATACAATGCTGGCTTATGAAGAAAGGGGGAAACAAGCATCTAAGATGACATCTTATGAGAGTGGCTTGCAAGTTCTTGGTAACATGCAAAGAATAAACCAAGTTGAAGCTATTCAAGGATATAATGATCTAAAGAATGAGTTGACAGAGTATTTGAGAGAATTTGCTGATCAAGGAAAGGTTGTCACACAAGAAGATATTACAAGTTTCTTTGATACAATGCAGTCGCGTAAGAGACAGAGGGTTGGTTCTGCTAATACCATTCAGTATCAATGCAAGTAATCAGGCAATACTTGACTTTAAATGAGGAAGTAATGTAGCAttatgtttaattttgttggTTGTTTAAAAGAAAAGGTTAGCTAAAACATATCATATAATGTTGTGGCATGTTCAATCAAACCTTGATAAATGTGACAactcaactttatttatctggTTACGCCTTCTGTTTATACTAATGCACATGAGTCTCAAACAAtcatgcaaattctattgtttcattAGACATTTTTTGGTCACAATTTTGTAGTAAAAGCTACAACagtatttcaaatttatctgggtTAGTGTAGAAATGGCCTTAGAATAGTTTTAAATTTGAGTACACCTTGTGCACTTTGATCAGACTGAATAAGGATagcatattattgttataattacAGTTTGCAGCATCTTAAtatcatattaatattaatcaataattaatattataaccATTGTGCTGTCCAAATGATAGGTAGTTAGCACAatgtttgtttaaataaaactaatttgGGGCAGATAGTGTAGAAAAATGCAGCTGTGTACAGCCACCTCTGCCCCTACCCCTTAGGAAAAGTTATTTTCTACAGTGGAGGGGAAGGGACAGCTGTAAAACTAAGAGCTTAGGGAAAGAGGAAGAAGACTGGGTATGTTCATATTTGATCacaatgtttatatttgcCATTGTGTTTTCCCTGTCAACTTCTGGTggaatattatattattgttatgtAAATCTTTATGCCAGGTAGGGAAATATACTTTTATAGTCTTGGGTCACGTTGTATGAAGCCCAGACAATCCCTATCCATTGAACAAATTTGATACAAAGTCTATATAGTGCAGGTTATCTGGAAGAAAACATTCAGGTTCTGTGTATTTGGCCCCTGGTGCTTTATGTATATGTATAGGAGCTTTTGTGGTATTAATTCAGGAATTTCCCTCACAACTGTTTCTGATGGAAGAAGTTTGTTGACATGATAAATGGGTGCAAGATTAGTAACTCTGAAATATTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8N806	Putative E3 ubiquitin-protein ligase UBR7 OS=Homo sapiens OX=9606 GN=UBR7 PE=1 SV=2
Q8BU04	Putative E3 ubiquitin-protein ligase UBR7 OS=Mus musculus OX=10090 GN=Ubr7 PE=1 SV=1
Q54DV0	Putative E3 ubiquitin-protein ligase ubr7 OS=Dictyostelium discoideum OX=44689 GN=ubr7 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005702 (this species only)
Ubiquitin family	E3\|E3 activity\|UBR-box · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02207 all species →	zf-UBR	Putative zinc finger in N-recognin (UBR box)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR003126 all species →	Domain	Zinc finger, UBR-type	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR047506 all species →	Domain	E3 ubiquitin-protein ligase UBR7-like, UBR-box	Interproscan
IPR040204 all species →	Family	E3 ubiquitin-protein ligase UBR7	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13513 all species →	E3 UBIQUITIN-PROTEIN LIGASE UBR7	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11979	UBR7; E3 ubiquitin-protein ligase UBR7	EC:2.3.2.27	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.