Gene detail

Detailed information of ENSDLIP00000028480.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020902984.1, calcium-activated potassium channel subunit alpha-1 isoform X3 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000031484

TGCAACAGCACTCAAGTTTGTGATAAATACTGTTTACCTAAAGATCGAAAATGGTGGTATTTTCTCATAACAAGCTGTGTCCTCTTCCTCTCTGGATTAATAATGATCTATTTAACAAGACTGCTTATTCGGTTTTGCAATGCTAAAAAGGGAAAGCTTGCTCCAACGGACAGGGTCCACCACACTTCCAAGAAACTATCGCAAGGAGCACCGAAGGAGGAAGAAATAAGCTTTTACGCTCGAGTGCGGGAAAGCGCAGGAACATTACTAACAGCACAGACTTTTAAGGGACAGTGTTTTgTGGTAATATCATTCATGTTCAATCTTTCATATGTTGTTCTGTATGCAGTTGAAGCCTCATAtcCAGTAGAACATTGTTTAAATCTAAATCAACAAATCTTATGGCTATTTGAACTTGGCCTAAATACCTTCTTCATccttcatttctttttacgaTTCCTTGCTGCCAATGACAAAGTTCGTTTTTGGCTGGATCCACTCAGCCTTGTGGATTTCTTCACAATACCTCAAGTATTTGTTTCTATAATTATTAGACAGAATTGGATAGGTCTTCGGTTTTTGAGAGCAATGACATTAATTAAGATGGCCGACATTTTACAGTTTCTTGGAATTGTTGCATCAAGtgGTGCCGTGACTCTAGCCAAGACGTTAGGCAATCTCTTTGCAATTCTATTGACCTTTGGTGGACTGATTCATTTGGTGGAaaacacagggaacccatgGGACTTGAGTGAAGTACAGGAAATGACGTATTTTGAAAGTCTTTACTTTCTTGTGGTGACGATGTCAACAGTCGGGTACGGAGACTTCTCTTGCAAGACGCTCTTTGGACGTCTAGTTATCATGATATTTATATGTGTTGGCTTGGGTATATTTGCTACCCATATGCCGCTGATCATGGAGTATTTCGCGTCACACTCGCAGTACCATGGATCTTACAAGATAGCGCAGGGCAGAAAACATATTGTACTGTGCGGATACATTACTCACGATACCGTCGAGAACTTTCTGCGTGATTTCCTGCATAAAGATCGCTCAGATGTTGGTGTCAATGTCGTTATCCTGGGAAATCAGTTTCCCGACACCGACATTCAGAGTTTGATCAAGAAACACTATGTACACGTGTCTTACTACATGGGGACAGTGCTGTCGTCAGAGGACTGTAGACGAGTCAAGATGTCTAAAGCTGACGCGTGTATAGTCCTGTGTAACAAGAACTGTTCTGTTCCGGACGATGAAGACGAAGAAAACATTATGAGGGTTGTTGCCATCAAGAACTTTTTCCCAAAAATGCGCGTCATCATCCAACTACTACAATATCATAACAAGGCTTATCTGCTTAACATTCCGTCATGGGATTCCAAGCTTGGAGATGATGTAGTTTGCGTAAATGAGTTGAAACTAGGATTTATTGCCCAGAGTTGCCTGTCTCCAGGATTTTCGACTCTTCTGGCTAACATATTCTCAATGAGATCTAATGATTCGGAAGAGGAGGAGGAAAATGAGAATGACTGGAAAAAATGGTACATTCAGGGAACAAACTGCGAACTTTACACGGAAAAGCTGGCTTCTTCGTTCAAGAGTATGACATTCCAACAAGTTGCAGAAATTTGCTTTGAGAAGTTAAACCTGTTATTAATTGCAATCGAAATTACCAAGATTGACGGAGAGAAAACGTTTGCCATCAAtccaaaagacaaaaacatgaCGATCCAGGCGAACACGCTTGGCTTTTTTCTGGCTGAATCATCTCTTGAAGTTAAAAGAGCTCTGCATTACTGTACCAGCTGTCATTCAAACGTAACAGATCCTGAACAAGTCAGAGAGTGTGAATGCTCTAAACGAAAAGGTGGAAATGCGTTCAAAAACATTGTGAAGGATGCTCTACCCGGGATATCGAAGTCTGATGATCTTGTTGTTTGGCGAGCAACGTTAAGAAAAAACAGCGACGAGACAACTGACTCTGATGGTAGTAAGAATGCCAATCATCTCGTGTAACTTTGGGAGGGGAGGGGCAGTAGAAATCACTGGAGACACGATCTCAAGTTTGCAATAATAACCATCGCATGAAGGCACTTGGCATGATTACTACTAACCTTATTTACCAATTACGTCACTCTATCCTATAATGACGTCAATTGTTCTATGACGTCACTTTAACTCAAGGTGTTAGTCATTCAAGCCACGATATGCCACAGTCACATAGAATTATTTGGAATAAATTAACGTCATGTAAAAATTCATGACGTCACGATCATGTTATGATGTCATCCGTGACGTCACTCGTCACCTGTCGTCACAGTATTACATAGTCTCACATGCACTGAGTTAACGTATCGTACTGGCTATGCTCTCGTTAGTTCTGCGCACATCTTGTATGTACTACACTGTTAAGTGTACCTACTCTGGTGTCACACTTGTCTAATGAAAGGCACTTACCAAGTTTTTTGGAGTCTTTAAAGGACTTCTAGAACTTCACCTGCGTTACAAGTGACATCAGTTTATCACGATGTTCACAGTGGTTTTGTGATCATCTCGGTTCACGGTTTTTAGAGGTCCTTTTTCATGTCACTTCTCAATGGTGCTGGGTTAAACTCAAAGACACTGCATGGTATAATCCTTTACTAACCTAATTTAATATCTTGTTCACATGCAATTATATTTATCGTGCACTGATTATGTTATTGTGGTTAATATTTTTGCTGCTCTTGTTTTGCTTATTGGTTTGTTCATTGTGTCTGCTTGTCtcactgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O18867	Calcium-activated potassium channel subunit alpha-1 (Fragment) OS=Macaca mulatta OX=9544 GN=KCNMA1 PE=2 SV=1
O18866	Calcium-activated potassium channel subunit alpha-1 (Fragment) OS=Sus scrofa OX=9823 GN=KCNMA1 PE=2 SV=2
Q9BG98	Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus cuniculus OX=9986 GN=KCNMA1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001657 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF03493 all species →	BK_channel_a	Calcium-activated BK potassium channel alpha subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047871 all species →	Family	Calcium-activated potassium channel slowpoke-like	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR003929 all species →	Domain	Calcium-activated potassium channel BK, alpha subunit	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10027 all species →	CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005267 all species →	Molecular Function	potassium channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0045211 all species →	Cellular Component	postsynaptic membrane	Interproscan
GO:0060072 all species →	Molecular Function	large conductance calcium-activated potassium channel activity	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000028480.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.