Gene detail

Detailed information of ENSDLIP00000028650.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020894923.1, uncharacterized protein LOC110233932 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P80193	Gamma-butyrobetaine dioxygenase OS=Pseudomonas sp. (strain AK-1) OX=29440 PE=1 SV=1
Q96UB1	Trimethyllysine dioxygenase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cbs-1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005841 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02668 all species →	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan
PF06155 all species →	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050411 all species →	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR003819 all species →	Domain	TauD/TfdA-like domain	Interproscan
IPR042098 all species →	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR038492 all species →	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR010376 all species →	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696 all species →	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0045329 all species →	Biological Process	carnitine biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00471	BBOX1; gamma-butyrobetaine dioxygenase	EC:1.14.11.1	Lysine degradation	ko00310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.