Detailed information of ENSDLIP00000028981.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: KXJ29348.1, Pre-mRNA-processing factor 6 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91YR7Pre-mRNA-processing factor 6 OS=Mus musculus OX=10090 GN=Prpf6 PE=1 SV=1
A1A5S1Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1
Q2KJJ0Pre-mRNA-processing factor 6 OS=Bos taurus OX=9913 GN=PRPF6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004674 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13428
all species →		TPR_14Tetratricopeptide repeatRepeatInterproscan
PF13432
all species →		TPR_16Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003107
all species →		RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR045075
all species →		FamilyPre-mRNA-splicing factor Syf1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11246
all species →		PRE-MRNA SPLICING FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000244
all species →		Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0046540
all species →		Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSDLIP00000028981.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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