Gene detail

Detailed information of ENSDLIP00000029673.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020896134.1, NPC intracellular cholesterol transporter 1 isoform X3 [Exaiptasia diaphana]
Species abbreviation DLINE · all data for this species · gene families

Sequence

CDS

Transcript

ENSDLIT00000032792

TCTATTCTCATAATAGAATAGTCCTGTGCAGGCTTTGTCTGCGTTTTTGTACACAATATCTTCACATggtttgtatttgtatttttccgTTAGCAATATAATTGTGTGACACGCGTTATACTACGTACGTGCTCACCCGCCTTCCGGAATGTCTCTGATTAACCTTTCACTTTCAGGATTTTAGTCTACTAAAGCTAAATTTGTCGTCAAATCGAGTTAAAAAGCATCAACTGAAGTCCTCACGAAGGATTCAAGACCATAAATTTATTGTATAAGCACAACTTAAATTGTTAACCATAATGAAGTTTTTCGGTTCTGCTTTGACCTTGTTGTCGTTGCTGTGTTTAAGTCAGGTTTATGGTTATGGTTTTATCCATAAAAAAGGATATTGTGTATGGTACGATCAATGCTATGTTACCGCGAAAGGAGATATGGCTATTAATTGCCTGTTCAACGGCCCGGcaaaacgaatgaatgattcTGAAGGACTTCAACTCCTCAACAAAATTTGCCCTCAATACTCAGCTGATCGACTAACCTGTTGCTCAGCAAAACAGCTGAAAACTCTAGACTCCACTTTAAATactttaaaacaatttgctgGTCGTTGTCCTGCTTGTCTACAGAATCTAATCAGCGTATTTTGTGAATTGACATGTAGTCCTAATCAATCTCTTTTTACGGACCCTAAAGCACTGTTTTTCGACAGAATGGCAATCATGGCAATCAACTACTATCCATCTCCAGCTGTCAAGCAGGGTGTCTTTGACTCGTGCAAGGATGTTGTTTTCCCTAAAGTTTTCGCTGGGAAAACATATTTTGAGAAACGTTTGCATCAGTTCTGTTACGGTAGTGCCAAACCATGCACCCCCCAGAAACTCTTTGAATTCATTGGTAGAAGATCAAATGGACTGTCTCCTTTCACCATATCATTCCCAAAGATTCTTCCAAAAGAGTTAACGTGGATGAATATTTCAACGTTAAAATGCAGCGACAGCTTTGTCAACCCGTGGACAAACAAAGCTGAGTTGAAATGCAGTTGTCAGAATTGTAAGGCATCGTGTTCACCTCTGCCGCCAAAGCCAAAACCAGATTCCAAATTTACACCATTTTATCGCACAGAACAGTTGATTATAACAGTGGACCCAAATTATCCACAGAACGACACAGGCTACCATcagggattttttgaaaagtggGTTCCATTTGGACATATCTACCATCTTGACTTGCTGAACCAGTCACTTAAACTTCAACACGATCTCACCAATATGAAAGTACCTTTCACTGAGGGCGGTAAAACCACAAACATTACACTAGAAGATGTGTGCTTAAGAACCCTGGACCCTTACAACAAACATTGTGACATCCAAAGCTTGTTCCAGTACTTCCAGAACAGTTTCGTCGAGCTGAATAAATGTTTAACTGATATGGGAAACGATTGTTACAACCACAAGCATGAAAACTTTGTGGCAGATTTTCACGACCATGTTTTATATTGCACTAGtaATCCTTTTTCCATCCACGATGAAATGTTTGGAGGTACATCGTGCCTTGGTGAAAATGGTGTCCCTGTAAATCCCAACATCGTCTTGGGAGGCTTTGAAGGTACAGATTACAAGATGGCTAGTAGCATGATCATCACCTTTGTCGTTAACAATCATGCTGACGGGAGTAAAAACGCTAAGACTGAAGCGTGGGAGAAGGCATTTATTGGATACATGAAGGATTATGTGAAAAATCCTGAAAACAGCAATCTAACTATAAGTTTCTTCTCAGAGAAATTCATCCAAAATATAGTCAACTGAACAAGAGCCACCACGTTCATGCCGTGCACTTAGCAAATCGAAGCGGGTTTACCGAATTTTGTTTAGTGATAGAACACATTTAGTTATTAACCTAAAAAGTAACATTTGACATGTTTCCTTATTTAAGGTATTTGGAAAGAAGTTCTCTGGAGGCCAATTTGACAGAGAAAAAACGGctaaaaacaaaacctttCATTAAATAAGTTTTAACGATATTTTAAGACATAGTCGCCTAATAAATCTAGAGTTTATCATAAGAGTTTTGTAGCAATAAAGGCATTAATTAATGCAAATCATgaagaaatcatttttctaCAAATATATTGTTGCTTTATTCGAAAACTCAAGAACTATATATTCAACTTACTTCCTAAATGTAAATCGATTTTGAAGGAATTATATCttgtaattttaaaattatgaaaGTTTGATGGTGTATTTGTCAGTTTAATTTGATACCGTCTTTTCCGACGAACGCCGAGATTCGAACAGTGAACCGATAGATAAAACTTACTTTGATAACTAGAAAATTTAATATtcacaaaacaacaaataaagttGATATTCTAATTGGAATAAAAGTAGGGTTTTATAAACGATATATTGAACACAGAGAGACGTACTTTGAACCTTTCATTGTTTTTCAGAACAATGGCGAGATATGGCAAGAATCGTGTGCAAAATATACGTCTCTAAGTGGTTGATTATGATCGCTTTACCGTTGCTTTTTAATCGATGTTATTCTTCGGTTGAGCTATCGCTTATTGCCTGTCggcattattttcaattttcatgcTCATAAAGTTTTCAAGTCTTCTTGAAGATATTGGACAATATTCTTGAAGTTTTCCATCGTTCATTGTCTTTTCCTTTTACGTCGTCTTTGTTTCTCATTCCAAAACTCTTTCAGTCTAAAGCTTTGCTTTACCGTTTCTTTGCTTCTTATCCATTGTAGAAAGACGTTTTGTAAAAAGTTTcaataaactgaaaatattgcaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35604	NPC intracellular cholesterol transporter 1 OS=Mus musculus OX=10090 GN=Npc1 PE=1 SV=2
P56941	NPC intracellular cholesterol transporter 1 OS=Sus scrofa OX=9823 GN=NPC1 PE=2 SV=1
O15118	NPC intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001652 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16414 all species →	NPC1_N	Niemann-Pick C1 N terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032190 all species →	Domain	Niemann-Pick C1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45727 all species →	NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015918 all species →	Biological Process	sterol transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0032934 all species →	Molecular Function	sterol binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDLIP00000029673.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.