Gene detail

Detailed information of ENSDLIP00000030010.1 in Diadumene lineata

Genomic Location: not available for this species
NR annotation: XP_020894835.1, protein argonaute-2 [Exaiptasia diaphana]
Species Diadumene lineata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DJB9	Protein argonaute-2 OS=Xenopus tropicalis OX=8364 GN=ago2 PE=2 SV=1
A3KPK0	Protein argonaute-3 OS=Danio rerio OX=7955 GN=ago3 PE=3 SV=1
Q6DCX2	Protein argonaute-2 OS=Xenopus laevis OX=8355 GN=ago2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000825 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08699 all species →	ArgoL1	Argonaute linker 1 domain	Domain	Interproscan
PF02170 all species →	PAZ	PAZ domain	Domain	Interproscan
PF16486 all species →	ArgoN	N-terminal domain of argonaute	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014811 all species →	Domain	Argonaute, linker 1 domain	Interproscan
IPR003100 all species →	Domain	PAZ domain	Interproscan
IPR032474 all species →	Domain	Protein argonaute, N-terminal	Interproscan
IPR036085 all species →	Homologous_superfamily	PAZ domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22891 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003727 all species →	Molecular Function	single-stranded RNA binding	Interproscan
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan
GO:0016246 all species →	Biological Process	regulatory ncRNA-mediated post-transcriptional gene silencing	Interproscan
GO:0035198 all species →	Molecular Function	miRNA binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02931	RP-L5, MRPL5, rplE; large subunit ribosomal protein L5	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.