Gene detail

Detailed information of ENSDTNP00000005207.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020905525.1, uncharacterized protein LOC110243738 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDTNT00000005207

ATGAATGTTGGTGGTGGCTCTGCAGTTGCTCCCAATCAAGACCTACAACAGGCACTTATGACTCTTATTTGCCATGGAACAGCTCAGGATGCTTCAAAAGCTCAAAGTATCCAAAAAAGTCACAATCATACAAGTGCCGAAGACAGTGGTTTTCATATTGAAGCATTTgagaaagaaaaacatttaaacccAAGAGAAATGTGTCAATGGAGAAGAACTTTGTTTTCGGTTTATGTTGGTCATCTCCCTGGTGATGTTACCATGAGAGAACTAGTCCAAATATTCACAAGTGCTGGTGAAATAAAGGATCTACATGTCCAGCCAGCTGACAATATGAAGAACTACACATATGGGTTCATACGATACAAGACAATAGAGGAAGCACGACGCGCCGTATCGACTATGAATGGACGAGTCCTCGGTAACAAGCACATTGTAGTAGAACTCGCTAGTGAAACTCGTATGGCATTGAGTCCTCAACAAAAAGACAAAGAAGAGATATTTTGTGAACGCGATCGTCTAATGAGACGAGATTACCCAACTGTAGTACGACGTCGCTCCTGCGAAGAAAACGACGAAGACACGGTACAGCGTAAAGTTACAGCATCATTGGCTAAACTCCAGTCCATTGATATGAACCAAAATTTCCTTGAAAAAATTGAGGAGATTCTAAAAAGAGTTGCCGAGGTTCCGGGTGAAACCACTTCGTACGCTACAGTGGATGAGGGACCAGCTTGTCCGCTAAAAGGGTTGCCGCAAATAACACCTATCACAGGAACACTATCACCAAGACAGAGCAATGCAGATCAAGTTACTGGATATACTCCACCTCCGGCATCACCCACATTATTAACATTTCCAAAAGAATTTGGGCGGGGTCGAACCAATTGTAACTTCACATCTAATCCTATACCATTTCCATTAGGACTGGGTCGTGGTGGACTGGGTCGTGGTAGAGGTATTGCTAGTGATAGTGTTACTACTAGTAAGATAGCAAACAACACACTGCAAGGCCCTTATGGTGCGTCGAAAGAACTTCCATGTCAAGATGTAAGATTCTCACCAACTAAACAGGACCAATCTACACCGAGCAGTAACAGCACAGAGAAGGGTATGGAGTTTGAAGCTTCTTTACTTGCACAACTAACAAAAACGCAAAACGTTAACAAGTCGACTAGTGAGAATGCGATGAATAATGGTGACGCTAAGTCTACATACAAATGGTCCGCTAATGAACTGGATCACAATGAATACAAACAATCGTTGATAGATTCTCAAGGTAGTTGTGTGAATCAGCCTGGTTCACCTACAGACAACCATGCCATCACATCAAAAATACCTGCTTTACCTTTGTATCAACCTGGTTCACCTACAGACTATCATACCAGCACTGTACCTGCTTTACCTTTGAATCAACCTGGTTCACCTACAGACTACCATGCCATCACATCAAAAATACCTGCTTTTCCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCAACACTGTACCTGCTTTTTCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCATCACATCAAAAAAAGCTGCTTTTCCTTTGTATCAACCTGGTTCACCTACAGACAACCATGCCAACACTGTACCTGCTTTTTCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCATCACATCAAAAATACCTGCTTTACCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCAACACTGTACCTACTTTACCTTTGAAAACACCACAAAGCCCACAGGGTCAAGAAAGTAGTGATACTCCTTTGCATACGGAACAATTTGACATAAATGTACTTACAGTTCATAAACCACTTACAGGTACTGGGTCTGATCCATTAGTTACCAATCCCTACTGTGAGAAAGACGAAAGCAATACCTATCACAGTACCAAAACATCGGGAAGTTGTAACGACCTCTCACCTGCAAAGGTTCAAAATGATGAACAGTTTTTGAATAACAACACAAGAGAAAAGAAGAACGATTCCCATAAAACATTAACGCAGTTAACAAAAGAATTGCTCCTTTCTCCAGTCGGTAATGAACCAGTTGAATGTGTAGAGGATCCCTTCAAGTTGAACGGTGAAATGCAGTCGTTATCGTACGAGAATATATCAACAGGTTACATTGATTACAAGGCTGTTTCACCAACTGCTTGTACTGTTTACCCTATGGCGATTACCGCGAAACCACCATCTACCGGGGATACCTACACACCCACATCCATCGGGGATACGTCGTCACCTACACACACCGGGGTTACCTCCACACTTATATGCAACGGAGAAACGTCCTCACCTACATGCATCGTGGATACCTCCCGACCTACAAATACCGGGGATACCTCCCAACCTACAAATACCGGGGATATCTCTCCACATACACACACCGGGGATATTTCCTCATCAAGACACACCGGGGATACCTCTCCCCCTAAAAACACCGGGGATGCCTCGCCAACATACAGTGAGACTGTGCTAACATCTTCATCGTCCAAGGAGCTTTCTTGCTTAGATACGAAAGCACATCTAAATCAAGAAAACATCCAATCAactgaacaaatgaatggaaacGAGACAAATGAAGAAAGTGTATCGTTGTCTTCTAAAACTGTCAAGCAAAGTGGCAACGATCAGTTTTCTAAACCGTTTAACGGGATGAACTGTATTACTTATGAGATGAAAAAGAACTTTCCAGATAACGTAGCTAGTATCCGGGAACATCCCTCCCCTAAAAGTGAAGAAGTACAATCATCTGTGGATGATACGACATTGATTGACAATGGCGATGTTAAATCACAAGAGTTACAAAATCTTGAGcTGGAATTCCATAACATTCTCAAAGAAAACAACTTGCTCCAAAAGATCACCACCAAGCAAAACAAGAAGATATCAGAACTATACCACGACCATGACAGAATGAAACTAGAAGAAGAGATTCACTACAAAGAAGTAGAACATCAGCGTGTCAAAGAAATGATGGCATCACGAAATGCCGAGCAGGAATTGTTGTACGAACGAGAAAAACTCGCTGCTGGCTTTGATAGTGATTTACAGAAAGAGctCGACCTGGAACTGCACATAGAAGTCATCAAGAGTGATATCAAACTAGCAAAGATGAACAATGAATTGCTTTCTCTTTATCGTCGTTTATATGAGATGTGA

Transcript

ENSDTNT00000005207

GTACACCAAATGTTCTAAAATGAATGTTGGTGGTGGCTCTGCAGTTGCTCCCAATCAAGACCTACAACAGGCACTTATGACTCTTATTTGCCATGGAACAGCTCAGGATGCTTCAAAAGCTCAAAGTATCCAAAAAAGTCACAATCATACAAGTGCCGAAGACAGTGGTTTTCATATTGAAGCATTTgagaaagaaaaacatttaaacccAAGAGAAATGTGTCAATGGAGAAGAACTTTGTTTTCGGTTTATGTTGGTCATCTCCCTGGTGATGTTACCATGAGAGAACTAGTCCAAATATTCACAAGTGCTGGTGAAATAAAGGATCTACATGTCCAGCCAGCTGACAATATGAAGAACTACACATATGGGTTCATACGATACAAGACAATAGAGGAAGCACGACGCGCCGTATCGACTATGAATGGACGAGTCCTCGGTAACAAGCACATTGTAGTAGAACTCGCTAGTGAAACTCGTATGGCATTGAGTCCTCAACAAAAAGACAAAGAAGAGATATTTTGTGAACGCGATCGTCTAATGAGACGAGATTACCCAACTGTAGTACGACGTCGCTCCTGCGAAGAAAACGACGAAGACACGGTACAGCGTAAAGTTACAGCATCATTGGCTAAACTCCAGTCCATTGATATGAACCAAAATTTCCTTGAAAAAATTGAGGAGATTCTAAAAAGAGTTGCCGAGGTTCCGGGTGAAACCACTTCGTACGCTACAGTGGATGAGGGACCAGCTTGTCCGCTAAAAGGGTTGCCGCAAATAACACCTATCACAGGAACACTATCACCAAGACAGAGCAATGCAGATCAAGTTACTGGATATACTCCACCTCCGGCATCACCCACATTATTAACATTTCCAAAAGAATTTGGGCGGGGTCGAACCAATTGTAACTTCACATCTAATCCTATACCATTTCCATTAGGACTGGGTCGTGGTGGACTGGGTCGTGGTAGAGGTATTGCTAGTGATAGTGTTACTACTAGTAAGATAGCAAACAACACACTGCAAGGCCCTTATGGTGCGTCGAAAGAACTTCCATGTCAAGATGTAAGATTCTCACCAACTAAACAGGACCAATCTACACCGAGCAGTAACAGCACAGAGAAGGGTATGGAGTTTGAAGCTTCTTTACTTGCACAACTAACAAAAACGCAAAACGTTAACAAGTCGACTAGTGAGAATGCGATGAATAATGGTGACGCTAAGTCTACATACAAATGGTCCGCTAATGAACTGGATCACAATGAATACAAACAATCGTTGATAGATTCTCAAGGTAGTTGTGTGAATCAGCCTGGTTCACCTACAGACAACCATGCCATCACATCAAAAATACCTGCTTTACCTTTGTATCAACCTGGTTCACCTACAGACTATCATACCAGCACTGTACCTGCTTTACCTTTGAATCAACCTGGTTCACCTACAGACTACCATGCCATCACATCAAAAATACCTGCTTTTCCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCAACACTGTACCTGCTTTTTCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCATCACATCAAAAAAAGCTGCTTTTCCTTTGTATCAACCTGGTTCACCTACAGACAACCATGCCAACACTGTACCTGCTTTTTCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCATCACATCAAAAATACCTGCTTTACCTTTGAATCAACCCGGTTCACGTACAGACAACCATGCCAACACTGTACCTACTTTACCTTTGAAAACACCACAAAGCCCACAGGGTCAAGAAAGTAGTGATACTCCTTTGCATACGGAACAATTTGACATAAATGTACTTACAGTTCATAAACCACTTACAGGTACTGGGTCTGATCCATTAGTTACCAATCCCTACTGTGAGAAAGACGAAAGCAATACCTATCACAGTACCAAAACATCGGGAAGTTGTAACGACCTCTCACCTGCAAAGGTTCAAAATGATGAACAGTTTTTGAATAACAACACAAGAGAAAAGAAGAACGATTCCCATAAAACATTAACGCAGTTAACAAAAGAATTGCTCCTTTCTCCAGTCGGTAATGAACCAGTTGAATGTGTAGAGGATCCCTTCAAGTTGAACGGTGAAATGCAGTCGTTATCGTACGAGAATATATCAACAGGTTACATTGATTACAAGGCTGTTTCACCAACTGCTTGTACTGTTTACCCTATGGCGATTACCGCGAAACCACCATCTACCGGGGATACCTACACACCCACATCCATCGGGGATACGTCGTCACCTACACACACCGGGGTTACCTCCACACTTATATGCAACGGAGAAACGTCCTCACCTACATGCATCGTGGATACCTCCCGACCTACAAATACCGGGGATACCTCCCAACCTACAAATACCGGGGATATCTCTCCACATACACACACCGGGGATATTTCCTCATCAAGACACACCGGGGATACCTCTCCCCCTAAAAACACCGGGGATGCCTCGCCAACATACAGTGAGACTGTGCTAACATCTTCATCGTCCAAGGAGCTTTCTTGCTTAGATACGAAAGCACATCTAAATCAAGAAAACATCCAATCAactgaacaaatgaatggaaacGAGACAAATGAAGAAAGTGTATCGTTGTCTTCTAAAACTGTCAAGCAAAGTGGCAACGATCAGTTTTCTAAACCGTTTAACGGGATGAACTGTATTACTTATGAGATGAAAAAGAACTTTCCAGATAACGTAGCTAGTATCCGGGAACATCCCTCCCCTAAAAGTGAAGAAGTACAATCATCTGTGGATGATACGACATTGATTGACAATGGCGATGTTAAATCACAAGAGTTACAAAATCTTGAGcTGGAATTCCATAACATTCTCAAAGAAAACAACTTGCTCCAAAAGATCACCACCAAGCAAAACAAGAAGATATCAGAACTATACCACGACCATGACAGAATGAAACTAGAAGAAGAGATTCACTACAAAGAAGTAGAACATCAGCGTGTCAAAGAAATGATGGCATCACGAAATGCCGAGCAGGAATTGTTGTACGAACGAGAAAAACTCGCTGCTGGCTTTGATAGTGATTTACAGAAAGAGctCGACCTGGAACTGCACATAGAAGTCATCAAGAGTGATATCAAACTAGCAAAGATGAACAATGAATTGCTTTCTCTTTATCGTCGTTTATATGAGATGTGATAGCCACTTTAATGAAAATTTATAACTGACGCAGGCGTTGCTATAGTGACGTCTTTTTCAGTCTATGATAAACTCAACAGACAAATTGTTATCATCAAAGTCACCACAGGTATCCCGGCAGGTAGTTTTCATATATTGGCTTATTTATATAGTAAGCGTTGCTATAGTGATGTCGTTTCCAGTCTATGATAAACTTAACAGGCAAATTGTTATCATGAAAGTCACCACAGGTATCCCGGCAGGTAGTTTTCATATATTGGCTTATTTATATAGTAAGCGTTGCTATAGTGATGTCGTTTCCAGTCTATGATAAACTTAACAGACAAATTGTTATCATCAAAGTCACCACAGGTATCCCGGCAGGTAGTTTTCATATATTGGCTTATTTATATAGTAAGCGTTGCTATAGTGATGTCGTTTCCAGTCTATGATAAACTTAACAGGCAAATTGTTATCATCAAAGTCACCACAGGTATCCCGGCAGGTAGTTTTCACATGTTGGGTTATTGATATGGTTTGATTTGCTTgtcatgttttgatttgtttcgtaTTGCAACTGAGTAGAACATCAAATATGACATATAATGTCTCGAACCcgggaatttttttttttataaaaaaacaagCGTTTTATAAATTAGAACGATTAATGAgaaaacataaaatatgagaatcaAGAAATCTGTCTTATAGCCTCCTCAAATAACATTTGTTCGTATTTAAATGTCTTGCACCcgggaaatattttttataaaaaaacccGAGCGTTTTataaattaaaacgattaatgagaaaaaatataaaatgtgaGTATCGAGAAACAGTGTTGTAGCCtccttaaataaaataaaaatatacgatTGTTCTGGTCTGATTAGCCTCGTATACTTTATACAACCTTATTTCATAAGTGTGAGGCTAGTTCGTAACAATTGATTAATGTATGTCGATTTGGTCTCTTCAAATCTGCAACTAAAAGAGAATTCAGATATTATATT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21245	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan