Gene detail

Detailed information of ENSDTNP00000009824.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_020905485.1, fatty acid desaturase DES2 [Exaiptasia diaphana]
Species abbreviation MSENI · all data for this species · gene families

Sequence

CDS

Transcript

ENSDTNT00000010254

caccatcattaatattaaaaaacttTAGCCGGCCTATGTCAATGTTAATTAGTGGTTGACAGTCGTCAATCTGTATGAAAAAGATTTTTGCTGAGGCAAGAACGACTCAGgctagaaaatgactttaagACACCGTGTGTTACCACAAAAAGATGGTGTTATCGACTCGGATGTCCTACGAGACGAGAAGAAGAAGGCTCCGGTTGAAAATCCCCCGTTCACACTCAAAGACATCAAGAATGCAATTCCCGCTCACTGCTTTGAAAAATCGCTTATCAAATCCACCATGTATTTGATTGTCGATCTGGTTGTAGTCTTCGGCCTGTTTTATATCGCTTTAATGGTATATAACTCTACTCTACCGTGGTATTTCCAGGTTATTTTCTGGCCTGTTTATTGGTTATGTCAGGGATGTGTGGCCTTAAGTGTATGGATCGTAGCTCACGAATGCGGACATTATTCCTACTGTGATAGCAAAGCCATTTGTGATTGGTTAGGTCTGGTATTACACACCGTACTACTAGTTCCTTATCACTCCTGGAGAATAAGTCATTCTAAGCACCATAAAAACACCAATCGTATGGATGGCGATGAAGCGTTTGTCCCGATGACTCGGAGCGAACTACAAGCTGAAGGTGGAATAGAGTTCCCGAGTTTTTTCAAAAGATTGAATCATACAATTCGTTATCTAGCAGTCGGTTTTCCAGCATATCTATTATTTCACGCCCGAGGCCGTAAGTACGGTAGTCACGTAGATCACTTTATACCTAAAGGTCCTCTATTCAGTAGGAAGGAGTACCACGATGTGATTATCAGCGACATAGGGATCTTACTTTGGACGGGCGTCCTTAGTTACTTAGGGTACATATATGGTCCCCAATGGGTCGTTTTCCTGTATGTGATACCCTACCTCCAAGTAAACATGTGGCTTGTTATTGTAACGTACTTACAGCACACAGACGTGAAGGTCCCACATTACGACGACGAAGAGTGGACCTGGCTAAAAGGTGCCCTATGTACAATGGATAGGGACTATGGTATATTGAACATAGTATTTCATAATCTCACTGACTCTCACATTGTTCATCATTTATTCTCGTATATGCCACACTATCATCTTAAAGAAGCTACACAGTACATTAAACCTGTCTTAGGCAAATATTATAATTACGATGATACCCCTGTCTGGAAAGCACTCTGGGAGAATGACTCTTACTGTAGATTCGTTGAGGATCATGGTGGGATACGATGGTACAAGTTTCTAAAGGAACAGTAAAGGGATGTTTAATGAAAATGCGGCACGTTTATCAAAGGACCTTAGTACTAATAAGGGACATTTATCAGGATTAAAATACTCTTCTCAAGGACTCAAGCACAGGCATCGCCAGGAACAGTATAGGGACGTTTGTCAAATGACCTAAATACTAATAAGGGACATTTATCAGGATGAAAGTACGCTTATCAAAGACACAATCAAAGATATCACAAGGAACATAAAATTGACTTTTTATTAGAGTATAGGACGTTTATCTCTGGGACcgaggtgtatacacctatttcaaaaaaggttgtcatcgccaaaagcgataggcgataagcgataggtcattgcaagacccaagtgcactatgggtataatctaaagtatccacaaaaaagcagaaaagctgtgtgTTCTGGGCACATTTTCATTCCTTCGAAAAGCCATATAACTCTACAGCGGAGATCGTcgtttagtggagctggcataattgaaaatttcacgacttaggattatacccatagtgcacttgggtcttggaatgacctattgcctatcgcttttggcgatgacaaccttttttgaaataggtgtacatataTAGAGAATATTAACCCTCTCGAGGGACCGtttaacatgaaaaaataatacataGTAATTGAATATAGAATAGAACAAACAAGTGTTCTATATCATTCTACTTTTAAAATGAAATGCCAGTTCActagttttctattgtttaataattgcactatttagtatttttttactTCACTGATGTACTGTTTGTTCTCTGAAGAAGGCGCTAACCTATTACTTTATTACTCTGAACCAGCGATCACTTGTGaatttttaatgtatttaacGGGCCAAACATTTTTACGCTTTAATTACGATTGATGAAAACAGTCTCTATTAGACTgtgtaaataataaaaaaatttgcGGAAATGACAATTTTCTTGTAAAAAGAATGTCAACGACAAAGCTTTTAGCGGCAGATGTTTTTgtaaaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q84VT2	Delta(12)-acyl-lipid-desaturase OS=Punica granatum OX=22663 GN=FAD12 PE=2 SV=2
A3F5L3	Fatty acid desaturase DES2 OS=Sorghum bicolor OX=4558 GN=DES2 PE=2 SV=1
Q8GZC3	Delta(12)-fatty-acid desaturase FAD2 OS=Vernicia fordii OX=73154 GN=FAD2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005746 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11960 all species →	DUF3474	Domain of unknown function (DUF3474)	Family	Interproscan
PF00487 all species →	FA_desaturase	Fatty acid desaturase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021863 all species →	Domain	Fatty acid desaturase, N-terminal	Interproscan
IPR012171 all species →	Family	Fatty acid desaturase	Interproscan
IPR005804 all species →	Domain	Fatty acid desaturase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32100 all species →	OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016717 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	Interproscan
GO:0006636 all species →	Biological Process	unsaturated fatty acid biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10256	FAD2; omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase)	EC:1.14.19.6 EC:1.14.19.22	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.