Gene detail

Detailed information of ENSDTNP00000010386.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020899876.1, aspartate aminotransferase, cytoplasmic isoform X3 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000010830

CTCCCCGAGTAACAACCGACATAGATCAACTTGGAGAGATTATTTTTGTCTTGACTGTTTGACGTCTGTTCTTGTGAAAATGGCCTTCTCAAATCTGTTTAAAGAAGTTCCTTTAGTGCCTACTGACCATGTATTTCATGTAAATGCATGCTACAACAAAGACACAAGCCCTAACAAAGTTAATTTAGGTGTCGGAGCTTACCGCGACAACGATGGTAAACCTTGGGTGCTTCCTGTTGTTGTTAAAGCTGAATTACAGATGGCCCAAGGAATTCAAGATGGCACTTTGAATCACGAATATTTAGGAATCGACGGCATGAGAGTCTTTAGCGACGCTGCGTCAAAGCTACTTCTTGGAGCCGATAGTCCAGCTCTTACAGATAATCGGGTCTGTGGGATTCAGAGCATTGGAGGAACAAGCAGCATTCGACTTGCCTTGGATTTCTTGTTTAAGTTCCATGCTTGTAAAACTGTCTATGTTTCTAAACCAACATGGGGAAACCATCAAAAGATCTGCTCACATGCTGGATACACTGATGTACGTAACTACACCTACTATGACGCTGACAACAAGTGCATCAAGTTTACTCAAATGCTGGATGATTTTGAGGCTGCTCCAGAGGGGTCTATTATGGTGCTACATGCATGTGCACACAATCCTACCGGGTATGATTTGTCCAAAGAACAGTGGAGTAAATTGGCTGAAGTGATGAAGAAAAAGCAGTTGTTTGCACTGTTTGACATTGCATACCAGGGATTTGCATCTGGAAACGTAGAGGAGGATGCATGGGCAATACGGTACTTTGTCCAACAAGGGTTTGAATTGTTTGCTGGGCAATCATTCTCTAAGAACTTTGGTCTTTACAATGAAAGAATCGGCAACCTCTGCATTGTAACTATTGATAATGACACAGCAGAGAGAGTTCGCAGTCAATTCAAAGCAATAGTAAGGCCGATGTTTTCAAATCCACCAAACCATGGTGCAAGAATTGTGGCAACAGTACTTAATAACCCTGCCTTGTACCAGgaatgGTTAGAGAATGTAAAAACAATGGGTGATAGGATCATTGAGATGAGAAACCTGTTATTCTCTAAGCTAAAGGAACTCGGTACTCCTGGAAGTTGGAGTCACATCGCTGATCAGAAGGGAATGTTTAGCTTTACAGGATTGAACTTGAAACAAGTAGAAATGCTATCAGCAAAGCACCACATCTACCTCCTCAACAGTGGAAGAATAAACATCTGTGGTCTAAACCCAGGCAACATGGACTACGTTGCTGCCGCAATCCATGATGTCGTTTGCAATGCACCAAAGTAATTACTACACATAACAGAGTGTTCAAATTGTTAGAACACTTTTTCCTTCAGAATAGATCAGTGCACTCCACAGGAATCCTGAAACACTTGTTTTTTTatcactgattctggaggggAAAGAGGGACTACTTGATAGGCCATATATTATTGTCTATTTTTGGTAAATTTGTTGGATTAGGATATTGATTCcaggtttttgtttgtttctgtcTAATAGGTTATCAAGTAGCCAATTGTAGTTGAGTATCATGTGACATGACTGTGTATctaaaacagttttttttaaaacatcacAACTTCTTGAATGTgtagtttttattttgtgattaCATGATTCTATAATATGATTGCTTCTGTATAACAGagttgtaatgaggtagagTGCGAACACTACACATCAatggaataaaatataattgctacAAAGAACCTTTGAATAGAGCGTAAATACTATCCCAGGGGGGAAtccttataaaagggggcgggggtcctcgtcggaaattctgaaaatgacccctaaaagggacatttattttgagatgatgggcttggcagtgatgaaatttcacccctaagaaGAGGGACCAATCAATAACGTATCATATTTGTTTGGTTTCTCGATGTTATTTGATACTAGCATCGATCAAACCGAATCCGGAAagttgattaaaataaaaatcaatctttgaaaagaagcattgttgttaaTCTTATAtcctaaaagggaccacaaaactcagctggtgggcattctcgtcattatcaccctaagcggGACCAAGACACTGATTTCGAGGACCCCCACCCCCTTTCATAAGGTGACCATTCACTCAAATCACATTCCCCTGAATCCAGTGGCAGATCTAGCGGGGTAGCACcagacaccccctagcgccacaaatattacccctattttatttagacatttagggaccggacaccccttaacaccttaagagcccttcatttgcaattgggacaccccctgaaaAATTTCTGG

Protein

Uniprot

Uniprot term	Description
P13221	Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3
Q5R691	Aspartate aminotransferase, cytoplasmic OS=Pongo abelii OX=9601 GN=GOT1 PE=2 SV=1
P00504	Aspartate aminotransferase, cytoplasmic OS=Gallus gallus OX=9031 GN=GOT1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004839	Domain	Aminotransferase, class I/classII	Interproscan
IPR000796	Family	Aspartate/other aminotransferase	Interproscan
IPR004838	Binding_site	Aminotransferases, class-I, pyridoxal-phosphate-binding site	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11879	ASPARTATE AMINOTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0004069	Molecular Function	L-aspartate:2-oxoglutarate aminotransferase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0006532	Biological Process	aspartate biosynthetic process	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14454	GOT1; aspartate aminotransferase, cytoplasmic	EC:2.6.1.1	Exosome	ko04147	deepkoala