Gene detail

Detailed information of ENSDTNP00000010658.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020894725.1, leucine-rich repeat-containing protein 56 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000011102

CACCAagaacaaaatggcggttatCGCCAATCGGTTTACAACTGAAAAATCTGCTCTCTGCGTCCCTAAAAATAGTTCTAGCTGAGAGATACTTCGTGTACAGTTGAAGCAGTATTTATTCTTGTATTTGACGAGTTTTGGATGGCCTGCGCTGGTGAAAACTACCCGTATCCAAGGCAAAAGAAAGCTATGGAAGATGATGTATTAACAATAGATGATATTGCAAACCATGTAACTCGCCATGGTGCGTACAACGGTGTCAGGATAAGGGAATTTGATGATGGTAACGTCAACCCGCAGCCCGTTAAAAGGGACGAGGAGGAAGAATCTGCGGACCATCTATGGGAGGAATTCCTTTCACCAAATAAATTGaaATCTCTAACTGGAGTAAGCAATCTAAATGATGTTACGTTTCTTGAAATGCAAGTCAATACTAATGACCACAGTCTTGGGAACTTTGGTGGCTTGCTTCCAAACTTAACCCAGCTAAAGCTATCAAATAGTGTGATTTCAACTGTAAGAGATCTAGGGACGTCTCTCACCAGTCTTAGAACACTGTGGATGTGTCAATGTGGTCTAACTGATTTAGATGGCATTAGTTCAGTCTCATCTCTTGTGGAACTATATGTAGCGTTCAATGATATCAGTGATGTCAGTCCTGTCAGTATGCTAGACAGCCTTGAAGTATTGGACCTGGAGGGTAACCTGATTGACGACCTATCACAAGTAGAGTTTCTTACACTGTGTTCCTCACTCAAGAGCCTCAATCTTGAGGGTAACCCTGTCTGTGTAGCTCCACATCCTACATCTTCAGCTgagGATATGGCTGAGTATGAATACCGTAGAGCTATTCATCAAGCAGTACCAGGGATTAAAGTACTAGATGATGAACCATTATTGATTGAGAAGATAGGTGGTAAACCGGTTCTTAGGGATATGCCAGATTCAGCCAAGAATATTAAAGTACCTAACCACTTGAAGGAAGAATGGAAACTGATCAATGATGGACTGAAAGTAATGGGAAATGAACAAGATGAAGAACAATCCAACTCAAGACCGTCATCAGAGAAGGGTACCACAAGACCAAAGACGGCTTTAGCCAGGCAGAGACCTGCTTCAGCGGCCAGGCAAAGACCATCCTCAGCTGCCAGGCAACGTCCTGGAAGTGCCTTTGGTCAGCGTCCTGGATCAGCTCTAGGGTCTTCTGGTAGTCAGTCAGAGTTGACAGGGATATTTCAGATGGAAGATGATAGTAGTGACCTTACTCATGggTCAGGGGCAGTCATCTGTGGTAACATATCAAGAGCTCTCAAATCTAGACGAAAGAATGTTGAAAAGGTAGCTGTTTCACCATTTTCTGATGAGCCCAGAATACATTTACCTGAGAAAAGCTATGAAGAAGAACAACCAAATGCTCCATCAAAGAAGGATATCTTTGAGGAATTGAAGGAATGGAGACAGGAATTTTCTAAGTTAATTAATGATGACCATAGATTGCCATCCACTAGCTTTGACTCAGAGTCAAGTCAGTCAGAAAGTGAGTCTCCTTTCTCTTCACCAAGAAGAACCGAAGCATTCGAAACCAGTCCTTCTTCATCTACTTCACACTCAAGACCGTCAATgtcccccacccctccccctcctagTCAGGCTAAACATACATCTCCTATGACAAGGTCACTACCAAGTGCTCCATTGGTTGGACGAGATCTCAACAGACCACACACATCAGGAGAGTTTAGGATGAGAAGGTATAGACAACCATCTACAGAACAGGCCGTCGACAACCTTAGATCTTCAAAAGATAGTAATAAGGTAGACAGTAACCACAACCAACCATCATTAGATGATAGAATACCATCTGCTAGTGTCCTGGACAATGAACCAAGATCATCGTCAGCACCAGTAAGAGCAATGAGACGATACAGAGTATTACCAAACACGCCAGGAACCCCTCCAGATTCTCAGTCTGACACCACATCTGAACCTTCCAGCCAATCACCAGTCAGTTCATTATCACATGGCGTGAGGCCAGGCACTGCTGCTGCAGCCCTTCAGAAGCGAAGACTTAAATCCAATAAACTTTAGAGTAGTTTATGCTGATTCATAGTTACAGCTATCGAAGTCAAATCCCGTCGAACTAGATAAACTGGTTAGGTTTTAAAGCCCCAACAGCAAAAGAGGTTTATATAAACCTTCAAAATGTACAGCGTTTATACCAGGTTAGGTTGAGGACTTCTCCAGAGATACTGCATTTGCCAAGACGGGTTGAAAGATATTTCAATGAGTGTGTGAAGTTCTCCATTGTAAATATGTGTAGTTTTAAATTATAAAGAAGTTTGAAGGTAAATAATAAAGCATCTTTGCTAAAAATAGCAAGGTACATTTTACACTGATATTGTAGttaattgttgtttgttttccacgttgtttttgtttattatcaaTTCC

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040091	Family	Leucine-rich repeat-containing protein 56	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22708	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25425	LRRC56; leucine-rich repeat-containing protein 56	-	Cytoskeleton proteins	ko04812	deepkoala