Gene detail

Detailed information of ENSDTNP00000012787.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_020910337.1, SAM and SH3 domain-containing protein 1 isoform X1 [Exaiptasia diaphana]
Species abbreviation MSENI · all data for this species · gene families

Sequence

CDS

ENSDTNT00000013343

ATGAGTAACACCGTTGAGGATTGGCTTCGCTCACTGGGACTGATCCAGTACACTCAAGCCTTTCTTGACAATGGCTACGATGAATTGGATATTTGTAAAGAAATGGGTGAGGAAGACTTGGATGCAATTGGAGTTAAGAATATCAAGGACCGTATCGATATTTTAAGTGCTGTAAATCGACTAAAGCAGAGTGGAACTGCCGTGTATTTTGTGCTTGAGGAAGGTGCTCAACCTCCACCCATCTCACAAACCCGCGAAAAAATCCTTCCTTTGAAACTCAAAATGTTCCTTCACGATACTTTAGAAGAGAATAACATCAAACTCAGTGATCCACCTTATACGATACAGAATGGTCTCCGTGGAAACCTTGAAACTCTAGTTACCTTGTATGCTGACAAGTTCTACACTTATGAAGAGGATGTGTTTGAGGCTTTGGAAAGTCTCCGTGTACGGCAAGTGGGTGAAATGCAGGAAGAAATGCTACAAGAAAGATCAGTCATTGAAGCTCCTAGTCCATCTACTGAATCTAAAAGTACCAAACATCGCCATCAAAGAAGCAATACAACGCCATTACAACCCACTGCTAAGGAACCTAGTGGTTGGAATACAGTACCTTCATCCATGAAGATTAAAAATAGGGTTGCAGATCCAGCAGACTACCTTGATGTTGATACTCAGTCTTCACCTCACAAGAAAGTCAAAAGAAGAAGACCAGTAGAAAGAAACTCAAAGCTCTCTAGAAGTCTTGATTCACTTAAAGAACTTCATGTTAATACAGAGATCAAAACTAAAGCAGATAAAGATACATCAACAAGTAAACCAAAGCAGTCTTCAATATTTGGTATATTTCGTAGCAGTAAAAGAAAGAATGCATCTGTTGAGGAAAAGTCACCAGATACTAAGTCTATCAGTAGCGTGAAGTCTGATTACCCTGCCACTAGTATTATGATGAGTGAAGAGGATAGAGTAGCTTTGATGCTGATGGTTAAAAATGGTGAATTGACAGTTGAAGAGGCTGTACAACAGATTGAAAGctaTGAAAATGAGCAAAGGATGTTACAGTCATCAAGACATGAACCAAGAACAAGTAGCTCATGTAGTGAGGAGGAATCCCCAAAAAACCAACATAAATTAAAACGAGGAATCTTTGGACGAAGTACTAAAAAGAAGACACCCAGTAGGCCTGGGTCTGAAATAGCAGCATGTGACATGACAATGAGTGAAGAAGAGAGGATCAATCTTATGAAAGGAGTTAGAGACCATCAGATTACTATAGAAGATGCTGTACAAAGGCTATACAGttttgaaGAAAACCATTCTCATATACAAAAGCCCAAAGTCAAACCTAAATTCTCTCCCAAGTCCCCACATTCTTTCTCAAGATTAAGTATCAAACGAGTGTCAGGAGCATTCTCAACAAGTAGTAAAGGACTGACAAAAGACGAGCCAAGCTCTGTATTCTATACACCTGCAGAGGTCCCAGCAAACATTGTCTCGGAAGATGATAGTGGGCTTGCGCCATCAGATTCATCCCCATCATCCCCAGAACCCTCGCCTGGTGGACATAGAAAGCTTGCTAACGATCTTGTTCGAAGTTTACACCAAAAACAGATCCATTCCACATCGTCATTACATAGCTCTTCAAGTAGTTCTGATGCTGTTGATAGACTGGGTTCTAGTGAGGACGCTGGGAGCCCTGTTAATAAGGGTTTTCTTGTTCATCCTGAAAAACAGTGTCTGGATGAAATGAAACATGTCTTCTTGCAACGAGGTTCACTTGAAGaAAATCAGTTTCCCTCTAAAACAAGTTCTTTGCCAAGAAATGGAAAACATAGAAATTCATCATTAAGCAGAAAGGCATCTTTACCAATTACTCCTAGCAAAaaaccaccccctccccccacgcGGAAAGCACCACTACCTCCTCCTCGACCATTCCAAAGACAAGCAACTGCTCCTGCTCTTCATTCCCCAGGGATGGGTACAGATGTTTCGACTACAATAGTAGAAGTACCAGAAAAGCAAGTGAAGCCATTTGTCCCACCAAGGAAAATGTCTGATGGCGATAATATAAAAAGTGAACTTGAACAAAAACTTTCTTCTTGTCCATCTCATCAAGAACAGGAACAATCTGGAAAGGTTGTTCTTAAAGAAGGACAACCGGAGCATTTTTCACAAACTAAGAACCGTTGTAATATTTCAAATAGGGATTCTATGGATGATGACGTATTTCCCCCTCCTCCACTGGATATTTTCAAAGAAGAGTCTCTGAAGGAATCACCAAACAAAAAGACGATTACAAAACCACCAAGGCATTCACTgataaagaaaaataaacaagaCAAGGCTATCGTTGAAGATGAAGTACAAAAACCCACACCTGAACCTCCCCCTGCTGAGAAACGCCCTCCAATTCCTGCCCCTCCTGAAAAACGCACCACTGAACCTCCCCCTGTGGTAAAACGCCCTCCAATTCCTACCCCTCCGGAAAAACGCTCCCCTGTACTCACCCCTCAAGAACAATCTACTCTCTCTACCCCCCTTGTAACAAAACCGACTCCAGTACTTCCTACTGATAAAACCCCCCCTGCTGTACCTCCAACAGCAGCAAAACCATTTTCAGTACCTCCCCTTCCAGCTAGAGCAGCCCCAGTGCCTCCACCGATAACCAAACCAAAACCAGCTGTTaaaaggaagcccaagctcCCACCCCGACCTCCTGCTAAACCAGGATCATCTGCCAACGATGACGAACATGATCAATGTGATGTTTGGATGTCCCAGGATCAAGGCTCTTCCTTAGATGTCCCTGAATTTCCTGTACCACGAAAGAGGCCCTCGCATTCATTGTCTGATTTAATTGACAGACGACTACGCATTGAACAAATAGATCTTACAGATACACCATATTCCAACCAGGATGGGAGCTGGGGTGTTCCAATAAATCTTGTAGATAGATACACAGAAGAAATGCGACGATCTCAAAAAGAAGTAGTTGAAATTTTAGACAGGATACGTTGCATAAGGCTTAAAGCAAATGGTCGAACATCGGTGCCTTGTGATGTGTCCCTCTTTCCGCAAGAACCAGACGACCTGGGTGAAATAAACAGTCTTGAGTGCTGGCTTATTTCATTAGGATTACCTATGTACATTGACAATCTTCAGGAAGTTGAATATGATGACATGGCCGCCATGCCATACCTCAAACAAAAACACTTTGAATATGCAGGTGTAGTTGATCTTAGACACATGCGCCGCTTATTGGCATCAGTTGAACGTATGACAAGATGA

Transcript

ENSDTNT00000013343

TCGGCCATGATCCGTGCCAGAGACCCCCCATGTATGACCCTCTTTATCCTGCTCTGGGTTCGATCGATAAATTATCGGAACAACGTCGATGAAACAGCAACTTGGTAGCCAGGCCAGGAAGGTAAAATAACATCACGGCTGAAATGTGAGAGACAAAACAATATGAgttgaaaaaatcattttttatttagCTAGAAATGAAACAAAGATGACAAAAGAACTGTCTGTGGATGCTGAGATACATAAAACATGGCAGTAACTCGCTTAAGAGCGTAAGAGGATTTTACAAGCTGTAAATTATGAGTAACACCGTTGAGGATTGGCTTCGCTCACTGGGACTGATCCAGTACACTCAAGCCTTTCTTGACAATGGCTACGATGAATTGGATATTTGTAAAGAAATGGGTGAGGAAGACTTGGATGCAATTGGAGTTAAGAATATCAAGGACCGTATCGATATTTTAAGTGCTGTAAATCGACTAAAGCAGAGTGGAACTGCCGTGTATTTTGTGCTTGAGGAAGGTGCTCAACCTCCACCCATCTCACAAACCCGCGAAAAAATCCTTCCTTTGAAACTCAAAATGTTCCTTCACGATACTTTAGAAGAGAATAACATCAAACTCAGTGATCCACCTTATACGATACAGAATGGTCTCCGTGGAAACCTTGAAACTCTAGTTACCTTGTATGCTGACAAGTTCTACACTTATGAAGAGGATGTGTTTGAGGCTTTGGAAAGTCTCCGTGTACGGCAAGTGGGTGAAATGCAGGAAGAAATGCTACAAGAAAGATCAGTCATTGAAGCTCCTAGTCCATCTACTGAATCTAAAAGTACCAAACATCGCCATCAAAGAAGCAATACAACGCCATTACAACCCACTGCTAAGGAACCTAGTGGTTGGAATACAGTACCTTCATCCATGAAGATTAAAAATAGGGTTGCAGATCCAGCAGACTACCTTGATGTTGATACTCAGTCTTCACCTCACAAGAAAGTCAAAAGAAGAAGACCAGTAGAAAGAAACTCAAAGCTCTCTAGAAGTCTTGATTCACTTAAAGAACTTCATGTTAATACAGAGATCAAAACTAAAGCAGATAAAGATACATCAACAAGTAAACCAAAGCAGTCTTCAATATTTGGTATATTTCGTAGCAGTAAAAGAAAGAATGCATCTGTTGAGGAAAAGTCACCAGATACTAAGTCTATCAGTAGCGTGAAGTCTGATTACCCTGCCACTAGTATTATGATGAGTGAAGAGGATAGAGTAGCTTTGATGCTGATGGTTAAAAATGGTGAATTGACAGTTGAAGAGGCTGTACAACAGATTGAAAGctaTGAAAATGAGCAAAGGATGTTACAGTCATCAAGACATGAACCAAGAACAAGTAGCTCATGTAGTGAGGAGGAATCCCCAAAAAACCAACATAAATTAAAACGAGGAATCTTTGGACGAAGTACTAAAAAGAAGACACCCAGTAGGCCTGGGTCTGAAATAGCAGCATGTGACATGACAATGAGTGAAGAAGAGAGGATCAATCTTATGAAAGGAGTTAGAGACCATCAGATTACTATAGAAGATGCTGTACAAAGGCTATACAGttttgaaGAAAACCATTCTCATATACAAAAGCCCAAAGTCAAACCTAAATTCTCTCCCAAGTCCCCACATTCTTTCTCAAGATTAAGTATCAAACGAGTGTCAGGAGCATTCTCAACAAGTAGTAAAGGACTGACAAAAGACGAGCCAAGCTCTGTATTCTATACACCTGCAGAGGTCCCAGCAAACATTGTCTCGGAAGATGATAGTGGGCTTGCGCCATCAGATTCATCCCCATCATCCCCAGAACCCTCGCCTGGTGGACATAGAAAGCTTGCTAACGATCTTGTTCGAAGTTTACACCAAAAACAGATCCATTCCACATCGTCATTACATAGCTCTTCAAGTAGTTCTGATGCTGTTGATAGACTGGGTTCTAGTGAGGACGCTGGGAGCCCTGTTAATAAGGGTTTTCTTGTTCATCCTGAAAAACAGTGTCTGGATGAAATGAAACATGTCTTCTTGCAACGAGGTTCACTTGAAGaAAATCAGTTTCCCTCTAAAACAAGTTCTTTGCCAAGAAATGGAAAACATAGAAATTCATCATTAAGCAGAAAGGCATCTTTACCAATTACTCCTAGCAAAaaaccaccccctccccccacgcGGAAAGCACCACTACCTCCTCCTCGACCATTCCAAAGACAAGCAACTGCTCCTGCTCTTCATTCCCCAGGGATGGGTACAGATGTTTCGACTACAATAGTAGAAGTACCAGAAAAGCAAGTGAAGCCATTTGTCCCACCAAGGAAAATGTCTGATGGCGATAATATAAAAAGTGAACTTGAACAAAAACTTTCTTCTTGTCCATCTCATCAAGAACAGGAACAATCTGGAAAGGTTGTTCTTAAAGAAGGACAACCGGAGCATTTTTCACAAACTAAGAACCGTTGTAATATTTCAAATAGGGATTCTATGGATGATGACGTATTTCCCCCTCCTCCACTGGATATTTTCAAAGAAGAGTCTCTGAAGGAATCACCAAACAAAAAGACGATTACAAAACCACCAAGGCATTCACTgataaagaaaaataaacaagaCAAGGCTATCGTTGAAGATGAAGTACAAAAACCCACACCTGAACCTCCCCCTGCTGAGAAACGCCCTCCAATTCCTGCCCCTCCTGAAAAACGCACCACTGAACCTCCCCCTGTGGTAAAACGCCCTCCAATTCCTACCCCTCCGGAAAAACGCTCCCCTGTACTCACCCCTCAAGAACAATCTACTCTCTCTACCCCCCTTGTAACAAAACCGACTCCAGTACTTCCTACTGATAAAACCCCCCCTGCTGTACCTCCAACAGCAGCAAAACCATTTTCAGTACCTCCCCTTCCAGCTAGAGCAGCCCCAGTGCCTCCACCGATAACCAAACCAAAACCAGCTGTTaaaaggaagcccaagctcCCACCCCGACCTCCTGCTAAACCAGGATCATCTGCCAACGATGACGAACATGATCAATGTGATGTTTGGATGTCCCAGGATCAAGGCTCTTCCTTAGATGTCCCTGAATTTCCTGTACCACGAAAGAGGCCCTCGCATTCATTGTCTGATTTAATTGACAGACGACTACGCATTGAACAAATAGATCTTACAGATACACCATATTCCAACCAGGATGGGAGCTGGGGTGTTCCAATAAATCTTGTAGATAGATACACAGAAGAAATGCGACGATCTCAAAAAGAAGTAGTTGAAATTTTAGACAGGATACGTTGCATAAGGCTTAAAGCAAATGGTCGAACATCGGTGCCTTGTGATGTGTCCCTCTTTCCGCAAGAACCAGACGACCTGGGTGAAATAAACAGTCTTGAGTGCTGGCTTATTTCATTAGGATTACCTATGTACATTGACAATCTTCAGGAAGTTGAATATGATGACATGGCCGCCATGCCATACCTCAAACAAAAACACTTTGAATATGCAGGTGTAGTTGATCTTAGACACATGCGCCGCTTATTGGCATCAGTTGAACGTATGACAAGATGAGACCACAAGCTCCTAAATAGTACCATGTGGTTTACTGGGAATTGTTTACATTTGGGCTCCCTGTTACTCAGTGGAAACTCAAATGGACTCGGGCTTCCTGTAGCTCATTGGAAACTCAAATggtcttgggcttcctgtggctcaCTGGAAACTCAAACAGActcggggttcctgtgtttcaCTGGAAAATGGACATGAGTTTACTGTGTTGTgtaggaaaataattttcaggtTTCCTGTGGTGGACTAAAATCTTGATAAAATTTGAACAGACACAGGCTTCCTGTATTATATTTGAAATTGGTAAAAACTTGAGTTGGTGAAGACAGATTTATAGAAATTTgcattgaaattgaattgtaattaTTTCCCAATCCAAAGAAATCGTTCTGTAATATACATCAGACTACAAGTCAAACTTATTGTTGTTTGTGTAGTAATTATtttcataataacaataataataatcatgattgtATTATTTATACTACGCAAAACAcaactatatacacctacttcaaaAGTCATTGTCACAATTAAAGCTAGTACAGTCCACACCCTGGAGACTAGCTGCAAAGAATGTATGTCAGtaatataaacataatttgttgatttattagatgtttttttaaaaatattatatttaccaTCTACCACAGTATCAAAATATACcaggaataaatcgataaaaatatGTGAAATGCTGAAATCCTTCACAAGAGTGTGTATTGTAGCTTCAGCTGAGACAACAAGTTTTGGAATAagtgtatatataataaattattgcacatcacaatttggtgaaaaattcTATATAGTTATACATAACTCAAAATTACAAGTCAAGCGAAAAAACCATCAATGTGAAAGTGGGAGCCAATGTTCTGGGATATATTTGCAGATGACCTATCAATAGACATATATTAATTTCTGCAGCGGTTATTAAATTATAATATGATGACCATAGATTGCAGTAACCAAAGCAATTGTATcagaaaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3V1H9	Sterile alpha motif domain-containing protein 5 OS=Mus musculus OX=10090 GN=Samd5 PE=1 SV=1
Q5TGI4	Sterile alpha motif domain-containing protein 5 OS=Homo sapiens OX=9606 GN=SAMD5 PE=1 SV=1
Q09YL6	Sterile alpha motif domain-containing protein 5 OS=Bos taurus OX=9913 GN=SAMD5 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005019 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF00536 all species →	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan
IPR051725 all species →	Family	SAM and SH3 domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12301 all species →	SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23705	SASH1; SAM and SH3 domain-containing protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.