Detailed information of ENSDTNP00000013179.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_031564283.1, uncharacterized protein LOC116299704 isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8JHW2Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q03350Thrombospondin-2 OS=Mus musculus OX=10090 GN=Thbs2 PE=1 SV=2
P35440Thrombospondin-2 OS=Gallus gallus OX=9031 GN=THBS2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR024731DomainEGF domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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