Gene detail

Detailed information of ENSDTNP00000013386.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_031573000.1, TBC1 domain family member 9-like [Actinia tenebrosa]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

ENSDTNT00000013981

ATGTGGACTAAACCAGAAGAAGTACTACTAGCTAATGCATTATGGATCACGGAAAGAGCAAATCCTTATTTCGTACTCCAGAGAAGAAAGGGACACGGAGGTGGTGGGCTTACTTCGTTGTTAATAGGTACTTTGGATAACGTCTTAGATTCAAAGCCCCTACCATTTCGCATTCTTCTTCAGCTTCCAAACTCTGATGTTAGCTATGTGATTTCCCATGGAGCAacttttaaagaaattgaaacGGATTGGGAATGGCTGACAAAATATCTTATTGAGACACTAgAAAATATTGACAGTGAGGATGACATCAGAGATTTTGTCAGAGCAAAGATAGAAAGCCTGGTGTGTAACGTTGAAGCTGATTGTGAACACGCTACAATGGAAGATAATGAGACAACCAAGTTCAAATCTGCTACAAAAAGATTTCACAGATTATTCAATCTTCAAGAAAATGAGAAGCTTGTCAATTATTACTCATGTAGCTACTGGAAGGGGCGTGTCCCTCGGCAAGGCTGGCTGTACTTATCTGTCAATCATGTTTGTTTCTATTCATTTCTGATGGGTAAAGAAGCAagactagttatacaatggacTGATGTTACTTCTTTGGAGAGGACAAACAGTGTCTTGTTAGCTGATGGTATTAAAGTGACCACAAGAGATGGAGAGTTCTGTTTTTCACTGTTAATGCATCCTTCAGAGACATTTGGACTGATGGAACAGCTTGCAAACCTTGCAATGAGACAGTTACTGTCCAATAAAGGATATGAAGAGACTGTTGCTTTACCAACTCTACCAAGGAAACAAGATAGAGCTACAATGAGGAAGATTCCAAACCTAAAGCGGGATTTAGACTCAAGAGCAAAAAGTGAAAGTTATCGGAACCAGTTTCGGCTGCCCATTGAAGAACGCCTTGACGGCCATTGTGATTGTGCTCTATGGAGTCCACATAGCAAGGGCCATGTAATGGGGACTTTGTACTGCTCACCAAACTTTCTTTGTTTCACTAGCAGGATTCGTCAGTTGCTGTCAGTGGTAATACCAATGAGGGAAATTACTCTGGTAGAAAAAGTGGAGACCTCTGCTATGGCACCTAGTGCACTTCATATCACTACCAAATCCAAGGCCAACTTTTTGTTCTCGTCGCTTGGTGAACGTGATTACTTGATGCGACTGATTTCAGACTTTTTAGCAAACACACCAGAACCAAGGAATGTAAGTGGTGAATGGGAATATGCAGCCGATGACGAAAAACCTCCAGCTAAAGATAAACCAGTGTTTCAGCCACCGCTGACACAAGTATTTATCAAGTCATCTTCTGATCAGGTCGCAGTCAAGGAATCTGTGAAGGAACACCTATGGCGACTACACTTGGCTGAATTTGGCAGtGGTGTATGTATGCATCGTACAGTAAAGACACACGAGCTTATTCTAAAAGGAATCCCTGATAGTCATCGTGCTGAGATATGGCTGATATACTCTGGAGCTATTAACGAGaTTGAAACGCAGCCAGGTTATTATGCATCTATGGTTGAGAAATGCCAAGGGAAAACCACTCTTGctactgaagaaatagaaagaGATTTACATAGATCTTTACCAGAACATCCTGCATTCCAGTCAGAAGTTGGTATCGGTGCGTTAAGACGAGTCCTTACAGCCTATGCATGGAGGAACCCTAGTATTGGTTACTGTCAAGCTATGAACATCGTTGCATCAGTTCTGCTATTGTACTGTACCGAGGAGCAAGCATTCTGGTTGCTTGTTGCTGTATGTGAACGTCTATTACCCGACTACTATAACACTAAGGTCGTAGGTGCTCTTGTAGATCAAGGTGTATTTGAGGATTTGACCAGACTTCATCTACCAGAGCTATACGATCATCTCAAAGACCTTGGTATACTGAACATGATATCCCTGTCATGGTTTCTTACTCTCTTTCTTAGTGTCATGCCGTTTGCTTCGGCTGTCAGTATCATGGATTGTTTCTTTTATGATGGCGTTAAGGTTTTATTCCAAATCGCTCTTGCTTCACTTGAATCCAACAAAACCCAGCTATTGGCCGTAGAGGATGACGGGGAGGCCATGACCATATTAGGAGCCTATCTTGATCATGTGACCAATAGAGACGCTAGTCCCCAGTCTGTCACGATGAATGTGAATAACCGTAGTATTGGAGTCCCTTGTCCAGAGTATTCGTCTTCTGTGGATGTATCCAATCTTATCCTAGAGTCTTACCAAAAGTTTGGCTTTATTACATCAGAACACATTGAATCAATGAGAAATATTCAAAGACTAAAAGTGGTGCAGGGCATTGAGGATAGTATGAGAAGAAACGTAGTAAGAACGATAGGAGCTGAAAGTTCTGTATTCAACCAAAAAGAACTGGAACAAATGTATGCTGTATTCAAGGTGAGTCATTTACAAACCCGTGGACGAGTACCAAGTCTAGAAACACGTGACTCAAGTCAACAATGGCAGCACCTACAGAATATCGACCTCGAAGGGTTTAAACCATTCTTTGTGAGCCTGACTGATTGGGGCAACTGTGAAATATGTGATGTGTTGGTTCTTAGAGCATTCAAGGTAATAACCCAGGTCAAAAGTGATTTCATTACATTCAAAGAACTAGTGGATGCATTGGGTAGAATATGCAAAGGTGACCTCCACGAGAGACTCCAGTTTATGTATAGTATGCACGTTGAGCCCGCGATCACTGATAGTTTGGAAGCTTGCTGTGAGGCCGGTATCGAGGCAAAGGAAGGAAGCAGCGAGAGGACTGGTGAAGAGATGGCCGAAGCGTCTAAAGCAGATGAAAAAGATGAAGAGACGCCATTGAGTTCGAGCGCCAAAAGCAAGGAGAGCATAAGGATCCAGGAAATGTTCCAAGAAGACGCGGACCCAGCCCAACCTCTTCCAAAGATGACTCAGGAACAGTTTATTCATCTTTGGAAGACCTTGTATTCCCTTTTCCGAGAATTACCGAACGAGCAGCAAATGTACCAAGCTATAGCAACTGTCGGAAACATTTTACTCAAACTCGGAGAATTCGGAACCGAATACTGTACTCCGTCACCTCTCGGAATCCCCGAAGATAACCTCGCCAATAGCTTCGATTCCGACAAAAACTCGGAAAGCCCAAGCCTACCCGAAGGCGTTACGACTTCTTCCGAACTTGCCTCGTCGACTTTGGTGAAAGAAGTTTTAGCCGACGCTGCACGCAGTAGTGAATCGTCGTTGAGCAGTCCTGTACGAAGTACTTCGGGTGACGACTTCGTGATGGTTCCGAGCGACGACGGTTTCAGCAGTCCTGAACAACTCGACTTAGACAAGAACGGCGTCGCAGATTCGTTATCTAGTTTATACATTAAGTTAGAGAACACTAAGATAGACTCTCAGCACGTGAGTACAACGGGAGAAGAAAACTGCAACGAGGCGACAACGCCGACTCAAGAAGAACCGGAAGTAGACCTTGATAGCGATGTGAGTGACAGGCCTTCTGGAATGTttgattctgattggtcgaTATCATTTGAACAGTTCCTAGCATCCATGTTAACGGAGCCATACCTCATGCATTATTTCGAACAGCAAATTGATGTGTTAGAAAGACTGAAGCGGTTAAAGACTGAAGGACTGACCAGTTTTAAGAGCACAAACAATTTACTGGAAGGGGACTGA

Transcript

ENSDTNT00000013981

GAAAAGACAATTTAATAACGATGACAcgaattatcaatttttaaataataatttcattAGATATTAAATCTCAAAAAAATATGTGGACTAAACCAGAAGAAGTACTACTAGCTAATGCATTATGGATCACGGAAAGAGCAAATCCTTATTTCGTACTCCAGAGAAGAAAGGGACACGGAGGTGGTGGGCTTACTTCGTTGTTAATAGGTACTTTGGATAACGTCTTAGATTCAAAGCCCCTACCATTTCGCATTCTTCTTCAGCTTCCAAACTCTGATGTTAGCTATGTGATTTCCCATGGAGCAacttttaaagaaattgaaacGGATTGGGAATGGCTGACAAAATATCTTATTGAGACACTAgAAAATATTGACAGTGAGGATGACATCAGAGATTTTGTCAGAGCAAAGATAGAAAGCCTGGTGTGTAACGTTGAAGCTGATTGTGAACACGCTACAATGGAAGATAATGAGACAACCAAGTTCAAATCTGCTACAAAAAGATTTCACAGATTATTCAATCTTCAAGAAAATGAGAAGCTTGTCAATTATTACTCATGTAGCTACTGGAAGGGGCGTGTCCCTCGGCAAGGCTGGCTGTACTTATCTGTCAATCATGTTTGTTTCTATTCATTTCTGATGGGTAAAGAAGCAagactagttatacaatggacTGATGTTACTTCTTTGGAGAGGACAAACAGTGTCTTGTTAGCTGATGGTATTAAAGTGACCACAAGAGATGGAGAGTTCTGTTTTTCACTGTTAATGCATCCTTCAGAGACATTTGGACTGATGGAACAGCTTGCAAACCTTGCAATGAGACAGTTACTGTCCAATAAAGGATATGAAGAGACTGTTGCTTTACCAACTCTACCAAGGAAACAAGATAGAGCTACAATGAGGAAGATTCCAAACCTAAAGCGGGATTTAGACTCAAGAGCAAAAAGTGAAAGTTATCGGAACCAGTTTCGGCTGCCCATTGAAGAACGCCTTGACGGCCATTGTGATTGTGCTCTATGGAGTCCACATAGCAAGGGCCATGTAATGGGGACTTTGTACTGCTCACCAAACTTTCTTTGTTTCACTAGCAGGATTCGTCAGTTGCTGTCAGTGGTAATACCAATGAGGGAAATTACTCTGGTAGAAAAAGTGGAGACCTCTGCTATGGCACCTAGTGCACTTCATATCACTACCAAATCCAAGGCCAACTTTTTGTTCTCGTCGCTTGGTGAACGTGATTACTTGATGCGACTGATTTCAGACTTTTTAGCAAACACACCAGAACCAAGGAATGTAAGTGGTGAATGGGAATATGCAGCCGATGACGAAAAACCTCCAGCTAAAGATAAACCAGTGTTTCAGCCACCGCTGACACAAGTATTTATCAAGTCATCTTCTGATCAGGTCGCAGTCAAGGAATCTGTGAAGGAACACCTATGGCGACTACACTTGGCTGAATTTGGCAGtGGTGTATGTATGCATCGTACAGTAAAGACACACGAGCTTATTCTAAAAGGAATCCCTGATAGTCATCGTGCTGAGATATGGCTGATATACTCTGGAGCTATTAACGAGaTTGAAACGCAGCCAGGTTATTATGCATCTATGGTTGAGAAATGCCAAGGGAAAACCACTCTTGctactgaagaaatagaaagaGATTTACATAGATCTTTACCAGAACATCCTGCATTCCAGTCAGAAGTTGGTATCGGTGCGTTAAGACGAGTCCTTACAGCCTATGCATGGAGGAACCCTAGTATTGGTTACTGTCAAGCTATGAACATCGTTGCATCAGTTCTGCTATTGTACTGTACCGAGGAGCAAGCATTCTGGTTGCTTGTTGCTGTATGTGAACGTCTATTACCCGACTACTATAACACTAAGGTCGTAGGTGCTCTTGTAGATCAAGGTGTATTTGAGGATTTGACCAGACTTCATCTACCAGAGCTATACGATCATCTCAAAGACCTTGGTATACTGAACATGATATCCCTGTCATGGTTTCTTACTCTCTTTCTTAGTGTCATGCCGTTTGCTTCGGCTGTCAGTATCATGGATTGTTTCTTTTATGATGGCGTTAAGGTTTTATTCCAAATCGCTCTTGCTTCACTTGAATCCAACAAAACCCAGCTATTGGCCGTAGAGGATGACGGGGAGGCCATGACCATATTAGGAGCCTATCTTGATCATGTGACCAATAGAGACGCTAGTCCCCAGTCTGTCACGATGAATGTGAATAACCGTAGTATTGGAGTCCCTTGTCCAGAGTATTCGTCTTCTGTGGATGTATCCAATCTTATCCTAGAGTCTTACCAAAAGTTTGGCTTTATTACATCAGAACACATTGAATCAATGAGAAATATTCAAAGACTAAAAGTGGTGCAGGGCATTGAGGATAGTATGAGAAGAAACGTAGTAAGAACGATAGGAGCTGAAAGTTCTGTATTCAACCAAAAAGAACTGGAACAAATGTATGCTGTATTCAAGGTGAGTCATTTACAAACCCGTGGACGAGTACCAAGTCTAGAAACACGTGACTCAAGTCAACAATGGCAGCACCTACAGAATATCGACCTCGAAGGGTTTAAACCATTCTTTGTGAGCCTGACTGATTGGGGCAACTGTGAAATATGTGATGTGTTGGTTCTTAGAGCATTCAAGGTAATAACCCAGGTCAAAAGTGATTTCATTACATTCAAAGAACTAGTGGATGCATTGGGTAGAATATGCAAAGGTGACCTCCACGAGAGACTCCAGTTTATGTATAGTATGCACGTTGAGCCCGCGATCACTGATAGTTTGGAAGCTTGCTGTGAGGCCGGTATCGAGGCAAAGGAAGGAAGCAGCGAGAGGACTGGTGAAGAGATGGCCGAAGCGTCTAAAGCAGATGAAAAAGATGAAGAGACGCCATTGAGTTCGAGCGCCAAAAGCAAGGAGAGCATAAGGATCCAGGAAATGTTCCAAGAAGACGCGGACCCAGCCCAACCTCTTCCAAAGATGACTCAGGAACAGTTTATTCATCTTTGGAAGACCTTGTATTCCCTTTTCCGAGAATTACCGAACGAGCAGCAAATGTACCAAGCTATAGCAACTGTCGGAAACATTTTACTCAAACTCGGAGAATTCGGAACCGAATACTGTACTCCGTCACCTCTCGGAATCCCCGAAGATAACCTCGCCAATAGCTTCGATTCCGACAAAAACTCGGAAAGCCCAAGCCTACCCGAAGGCGTTACGACTTCTTCCGAACTTGCCTCGTCGACTTTGGTGAAAGAAGTTTTAGCCGACGCTGCACGCAGTAGTGAATCGTCGTTGAGCAGTCCTGTACGAAGTACTTCGGGTGACGACTTCGTGATGGTTCCGAGCGACGACGGTTTCAGCAGTCCTGAACAACTCGACTTAGACAAGAACGGCGTCGCAGATTCGTTATCTAGTTTATACATTAAGTTAGAGAACACTAAGATAGACTCTCAGCACGTGAGTACAACGGGAGAAGAAAACTGCAACGAGGCGACAACGCCGACTCAAGAAGAACCGGAAGTAGACCTTGATAGCGATGTGAGTGACAGGCCTTCTGGAATGTttgattctgattggtcgaTATCATTTGAACAGTTCCTAGCATCCATGTTAACGGAGCCATACCTCATGCATTATTTCGAACAGCAAATTGATGTGTTAGAAAGACTGAAGCGGTTAAAGACTGAAGGACTGACCAGTTTTAAGAGCACAAACAATTTACTGGAAGGGGACTGACCATCTTAAATAGAAGAATTATAATTAAGCCTTCGTATCTAGTTCAACAAACGCTAAGACGCATCGACATGTCCTTGACAAGAAGAACTTGTTCGAGAAGACGGAGAAAACTGTCATATATACCTTATATCGACTATAACAATCGCGAAAAcatgtcaaggaaaacttgtttaTCGTCTTCACGAGCAAGGGAAACGTGTCAAGAAAAAACTGCTTGTTAAAACGCGGTTTTACCGACTCATTTCATTACCACTTATGCACAGAATCGAGAAATGGCGAACAGTTTGAATAACTATtcttcttgactgactagcctcgcatacatgtaaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UYK3	TBC1 domain family member 9 OS=Mus musculus OX=10090 GN=Tbc1d9 PE=2 SV=2
Q6ZT07	TBC1 domain family member 9 OS=Homo sapiens OX=9606 GN=TBC1D9 PE=1 SV=2
Q5SVR0	TBC1 domain family member 9B OS=Mus musculus OX=10090 GN=Tbc1d9b PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003146 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02893 all species →	GRAM	GRAM domain	Domain	Interproscan
PF00566 all species →	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035969 all species →	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan
IPR004182 all species →	Domain	GRAM domain	Interproscan
IPR036014 all species →	Domain	TCB1D9/TCB1D9B, PH-GRAM domain 1	Interproscan
IPR036017 all species →	Domain	TCB1D9/TCB1D9B, PH-GRAM domain 2	Interproscan
IPR000195 all species →	Domain	Rab-GAP-TBC domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47666 all species →	PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSDTNP00000013386.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19951	TBC1D8_9; TBC1 domain family member 8/9	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.