Gene detail

Detailed information of ENSDTNP00000014485.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_020899915.1, crossover junction endonuclease MUS81 isoform X1 [Exaiptasia diaphana]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

ENSDTNT00000015112

ATGGCGAATCCACCAAGAATTCGCAATTATCAAGATTTGAGATACAAGTTTATCAGAGGTTTAATCAAGCATGAACATCAACAACGACGGCACCAATTTCTAAAACAAGCAGCTGAGTGGACGTCAAAAGCCATCGTATCACTATCCATTGCATCAGAACCAATCAGATCATCACAACAGGCTACTCAACTTGAAGGGGTTGGACCAACAATCAGAGCAAGACTTGACAAAATCCAAAAAGAGAACACTGTTAATAATGATTCTCCTATAAAAGGTCAGCATGTTAGCACAGGTTCTGGTCTACTGGTTGCTTTACTGAATGAAAGTGAAGCAATAGGTTCATCAGAGGGAGGAAAGCCACTAGTCACAGAGTCAGATTTAAAGGAAGCGTGTTCTCTGGTTTGTGAAGAGAAGTTTAATGTAGCCAAGCCTTCTGCTTATGGCGCTCCCGTTCTGTGTCCAGCCTGGTGGAGGATCAACGTTCTCATAAGTAGAGGATTTGTCAAGAAAAGAACAAGAGGTAAAAAAGCTGTGTTTGAGCTGTTAACAGAAGGAGAAGAAGTAGCAAGAAGACTAAGAGGAAATCATCCCCCGCCAGTACGGATTAGAAGCCACAGCCCAACAGCTCCGACTACCCCCACCAACACACCAACTCAGAGCAACAAAAAACCCACTTCCTCCAAAAGGAAACCACAAGCATCCAACTGTGCAAGCAGCAGTAGTAGTACTTCAACCATATCAACCAATTATAATGCAGGTCCTTTGTACAGTTACGATAATGGCAACGATGGTGTTGTTCTTCTTGTTGATGACCATGAACTTGGTGGAGACAGGATGAGATTAGGAGAGTTAAGTAGAAGGCTCAAACATTGGAATGTACAACACAAGACCACACACCTCCCCTGTGGAGATTACTTGTGGCTCTGGCGGCATAGAGAAGAAGAGGTTACATTGCCAGTACTAGTGGAAAGAAAACGAGCTGATGATCTAGCAGAGAGTATCAAGGATGGGCGGTTTGTTTCTCAGAAAGATAGAATGAAACAATGGAGGAAGGATTTTGGTATGCTATCAGATGAAGTATGTCTTCACTACATCGTGGAGTCCACCCCTGAGGCATACTGTGTAAGGTGTTTGGATGGGTGTGGTGGTGTAGGGAAATGTGGTAATCCAACAGTTGAACAACTAGAgGTTGTGATCATGGAGCTAGAACGTTCTCGAGACTTTAATTTAGTACGTACAGAAAACATTGAGACAACAGTGGAATTCTTGGCTTCTGTCACAGTGGAACTACAGCAGAGAGTTACTAACGGTGACTTCGAGGCGCTCAGACTAATGAAACAAGGTGGTTATACACCAACCAGTAATAGAAGTACTTCCTCTACCTACACATCTACTAACAAGTCTTCCTCCCTGGTAACCAAGACAACCAATTTTACACCACACAACCACCTTAACTTAACACCTTCGACGTCGAAAACAGACTATGCGGATAATAAGCCATATTCATCATCCTCTGTTTCCAAGGCAACCCATTCAACACCACAAAGCCATCTTAATTCACCAACCCGTAGAACCACTGAACAGTCTTACTCGCCAAGTAGACTGGGCACTAAAAGGCGATTCGTTGGGATCGACCAGGATGACGTCATAGACAGGAAGCCCGTCAAGTGTAAGGCTGAGTTTATCGATTTGTGCGATTCACAGGACGATGATGTTATTATACAGTCTTCTTTTGATAATAACAAAGCCGCCTTTTCCAATCATTACAATTCAAACATACAACATTATGATAGACAATTTCAAACAAGCCAatcgaccaatcacaacgctCAGACACGCATCAATCAAGATACGAAAGCCAATGGAATGCCAATCTTTGACGTCATTCAAGATTTCAATCAAAAAAGCCGagcaaccaatcagaacgcTGATAATCAAGACGAGGAAGCCAAGATAGTGTCAGTCCGTGAAGTCATACCTGATGCGAGTCTTGATGATGTGCTAAGTGCGTTGAGTTCTTGCGCTGGTAAAGTAGACTTGGCCGTTGAAAAACTCCTTGATAGGTTTACCAGCTAA

Transcript

ENSDTNT00000015112

CAACATCGCGAGGGCCTGGTGTGAAATAACACTCACCGCTCGCGCTCAAAATGTGATACATGTGACTTGCCCTGGCTAAAAATGGCTCAATTTGACCAAAAATTCTATCAATTAACTTGTAAAAAGCTACAGAAAAGCTAAATAGAGGATAGAGATTAGTAAGGATGACATTATAGAGGTATTTTCATGGCGAATCCACCAAGAATTCGCAATTATCAAGATTTGAGATACAAGTTTATCAGAGGTTTAATCAAGCATGAACATCAACAACGACGGCACCAATTTCTAAAACAAGCAGCTGAGTGGACGTCAAAAGCCATCGTATCACTATCCATTGCATCAGAACCAATCAGATCATCACAACAGGCTACTCAACTTGAAGGGGTTGGACCAACAATCAGAGCAAGACTTGACAAAATCCAAAAAGAGAACACTGTTAATAATGATTCTCCTATAAAAGGTCAGCATGTTAGCACAGGTTCTGGTCTACTGGTTGCTTTACTGAATGAAAGTGAAGCAATAGGTTCATCAGAGGGAGGAAAGCCACTAGTCACAGAGTCAGATTTAAAGGAAGCGTGTTCTCTGGTTTGTGAAGAGAAGTTTAATGTAGCCAAGCCTTCTGCTTATGGCGCTCCCGTTCTGTGTCCAGCCTGGTGGAGGATCAACGTTCTCATAAGTAGAGGATTTGTCAAGAAAAGAACAAGAGGTAAAAAAGCTGTGTTTGAGCTGTTAACAGAAGGAGAAGAAGTAGCAAGAAGACTAAGAGGAAATCATCCCCCGCCAGTACGGATTAGAAGCCACAGCCCAACAGCTCCGACTACCCCCACCAACACACCAACTCAGAGCAACAAAAAACCCACTTCCTCCAAAAGGAAACCACAAGCATCCAACTGTGCAAGCAGCAGTAGTAGTACTTCAACCATATCAACCAATTATAATGCAGGTCCTTTGTACAGTTACGATAATGGCAACGATGGTGTTGTTCTTCTTGTTGATGACCATGAACTTGGTGGAGACAGGATGAGATTAGGAGAGTTAAGTAGAAGGCTCAAACATTGGAATGTACAACACAAGACCACACACCTCCCCTGTGGAGATTACTTGTGGCTCTGGCGGCATAGAGAAGAAGAGGTTACATTGCCAGTACTAGTGGAAAGAAAACGAGCTGATGATCTAGCAGAGAGTATCAAGGATGGGCGGTTTGTTTCTCAGAAAGATAGAATGAAACAATGGAGGAAGGATTTTGGTATGCTATCAGATGAAGTATGTCTTCACTACATCGTGGAGTCCACCCCTGAGGCATACTGTGTAAGGTGTTTGGATGGGTGTGGTGGTGTAGGGAAATGTGGTAATCCAACAGTTGAACAACTAGAgGTTGTGATCATGGAGCTAGAACGTTCTCGAGACTTTAATTTAGTACGTACAGAAAACATTGAGACAACAGTGGAATTCTTGGCTTCTGTCACAGTGGAACTACAGCAGAGAGTTACTAACGGTGACTTCGAGGCGCTCAGACTAATGAAACAAGGTGGTTATACACCAACCAGTAATAGAAGTACTTCCTCTACCTACACATCTACTAACAAGTCTTCCTCCCTGGTAACCAAGACAACCAATTTTACACCACACAACCACCTTAACTTAACACCTTCGACGTCGAAAACAGACTATGCGGATAATAAGCCATATTCATCATCCTCTGTTTCCAAGGCAACCCATTCAACACCACAAAGCCATCTTAATTCACCAACCCGTAGAACCACTGAACAGTCTTACTCGCCAAGTAGACTGGGCACTAAAAGGCGATTCGTTGGGATCGACCAGGATGACGTCATAGACAGGAAGCCCGTCAAGTGTAAGGCTGAGTTTATCGATTTGTGCGATTCACAGGACGATGATGTTATTATACAGTCTTCTTTTGATAATAACAAAGCCGCCTTTTCCAATCATTACAATTCAAACATACAACATTATGATAGACAATTTCAAACAAGCCAatcgaccaatcacaacgctCAGACACGCATCAATCAAGATACGAAAGCCAATGGAATGCCAATCTTTGACGTCATTCAAGATTTCAATCAAAAAAGCCGagcaaccaatcagaacgcTGATAATCAAGACGAGGAAGCCAAGATAGTGTCAGTCCGTGAAGTCATACCTGATGCGAGTCTTGATGATGTGCTAAGTGCGTTGAGTTCTTGCGCTGGTAAAGTAGACTTGGCCGTTGAAAAACTCCTTGATAGGTTTACCAGCTAATAACTTtttaatacagtggaaccccgttaatccggccaccgaagggacagtccAAAGTGGCCGTGTTAATGGGGTGGccgtaaattttatagaaaatgtatgggcatgcatttcgtcgggacctgaaaaactagccgcaataacggggtggccgtattaagcgggtggccgtaaggcggggttccactgcaGTCACCTTCACAggtccctgtgccatcttga

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q59NG5	Crossover junction endonuclease MUS81 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MUS81 PE=3 SV=1
Q754C9	Crossover junction endonuclease MUS81 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MUS81 PE=3 SV=1
Q04149	Crossover junction endonuclease MUS81 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MUS81 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013602 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02732 all species →	ERCC4	ERCC4 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047416 all species →	Domain	MUS81, XPF-like nuclease domain	Interproscan
IPR011335 all species →	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR027421 all species →	Homologous_superfamily	DNA polymerase lambda lyase domain superfamily	Interproscan
IPR033309 all species →	Family	Crossover junction endonuclease Mus81	Interproscan
IPR006166 all species →	Domain	ERCC4 domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13451 all species →	CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000712 all species →	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000727 all species →	Biological Process	double-strand break repair via break-induced replication	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0006308 all species →	Biological Process	DNA catabolic process	Interproscan
GO:0008821 all species →	Molecular Function	crossover junction DNA endonuclease activity	Interproscan
GO:0031573 all species →	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0048257 all species →	Molecular Function	3'-flap endonuclease activity	Interproscan
GO:0048476 all species →	Cellular Component	Holliday junction resolvase complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0004518 all species →	Molecular Function	nuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDTNP00000014485.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.