Gene detail

Detailed information of ENSDTNP00000016869.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_020912254.1, ribosomal RNA-processing protein 14-C [Exaiptasia diaphana]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54G38	Surfeit locus protein 6 homolog OS=Dictyostelium discoideum OX=44689 GN=surf6 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008957 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04935 all species →	SURF6	Surfeit locus protein 6	Family	Interproscan
PF15459 all species →	RRP14	60S ribosome biogenesis protein Rrp14	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007019 all species →	Family	Surfeit locus 6	Interproscan
IPR029190 all species →	Domain	Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain	Interproscan
IPR029188 all species →	Domain	Ribosomal RNA-processing protein 14, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14369 all species →	SURFEIT LOCUS PROTEIN 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan
GO:0042274 all species →	Biological Process	ribosomal small subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14795	RRP36; ribosomal RNA-processing protein 36	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.