Gene detail

Detailed information of ENSDTNP00000018151.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_028515466.1, protein O-mannosyl-transferase TMTC4 isoform X2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000018939

AGCTCATTATTTGGTCTATTTGTGCATGATTTTTGGGGAGGAACCCTTATAGCTAATGAGTCCCATAAAAGTTATCGTCCATTAACTGTCCTTACGTTTCGATTGAACTATTGGCTTTCTGGAGGATTGTATCCTTGGGGTTTTCATTTCGTCAATGTAGTTCTACATGCTATTGTGTCGGTTCTATCTCTACGGGTATTTGATGAAGTGTTCGAGAATAGAACATCAAACACTGGGGTGTCGAGAGAAGCTTTTCTGGCTGCTTTGATATTTGCGGTCCACCCTATACACACAGAGAGCGTTGCTGGTATTGTTGGCCGTGCTGATCTTCTTTGTGCCTTATGTTTCTTTGTGTCTTTTTTGGTTTTTATAAAGTGCTGTAAGCTGTATAATTCTCACAATTCCCAGTCTTCCCTTGGCTATCTGTTAATAAGTGCTTCTTTATGTGGTCTTGCTATGCTGTTCAAAGAACAAGGCATAACTGTTCTAGGTTTATGTTGTGCTTATGATGTCATTGTGGTCTGCAAAGTAGACTTTATTCAACTTCTAAAAAGTATACTCAAAAGTAAAAGAAATGGTTCTGAAAATGGGAATAACAAAGAGTCCCTCCTGGCAGGTCTCTTCTACAGACAGTCTGTATTGGTGCTTGTTGGTATAACACTGTTATTAGGTCGCTGGAATGTCATGGCCTCAACACCACCACGCTTTCAGGTGTCAGACAATCCTGCTTCATTTGAGAAATCCTTTATAACTAGaGTCATTAACTATAACTACTTATATGCAATGAACCTATGGATATTAGCATGCCCTTGGtggctttgttttgattggtCAATGGGCTGTATCCCTCTCATCAGGAGCACTAAGGACCCAAGAATACTAGCTGTACTGTTAATGTGGAGTGTGGTTATTGGTTTATTAGGATATTGCCTCCTAACTGCTCCTTCTCGATATAGAAGAATATGTACAATGGGATTAGCATTCCTAGTGGTTCCATTCCTACCAGCATCTAATGTATTTTTTAGAGTTGGGTTTGTTGTAGCTGAACGTGTTCTCTATCTATCAAGTGTGGGTAGTTGTATCTTAGTTGTGCTTGGAGTGAAAGCTTTAAGCAGGAAGTCTTCCCTCAGGAAGTTTGTTACTTGTGGTATGTTCACAATGGTAGTGTGTTTTGCCTTATGGACAATAAAACGAAATGTTCAATGGCTTGACGAGGATTCATTGTTCTCGTCTGGTGAAGCAGTCTGTCCACTAAATGCCAAGGTTCATTACAACATTGGTAAAGTGAGGTCTAACCAGCATAAAGAAGAAGAAGCCTTGCAGTACTATAGACAGGCTGTTagGCTTAATCCTACGTACCATGACGCCTTGAACAATTTAGGAAATCTTCTTAAGGAAAAAGGAGAAATCAAAGAAGCAGAAGAGCTCTTGGAAAGAGCTGTCAAGTCAAGTCACACGTTTGCAGCTGGATGGATGAACCTTGGGACAGTCAAGGCTGCCATGAACAAAATGGAGGAGTCAGAGTTGTGTTATAAGAATGCTATTAGATTCAGGAAGAAGTTTCCAGATGCTTATTTCAACCTTGGTAATTTGTACATTGACTGGGGTAAAAGTGAACAAGCCATAACTGCATTTCAGAATGCTGTCAATCTTAAAAAGAATCATGTTGGAGCTTGGTTAAATCATATATTACTACTAGACAAGTCAGaaagaaaaaaagaaggcATATTACTGGCTAAAGAAGCATTGCAATATATTCCCGACGAAGCTTCTATTCACTTTAATTTAGGCAATATGTTGGGACAAGAAAATAAATTTGAGGAAGCAGAAAAACACTTTTTAAAAGCAATTGAAATGAACCCCCTAGTAGCTGAGATACAAGGAAACTTAGGTGTTCTTTACCATCGATGGAGGAAGCTAGATAAAGCCGAGGAACAGTACTACAAAGCACTGGAACTAGACCCACATGGATCAAACATACATGAAAATCTAGAAAAACTAGAACGAActaaacaaaaattacaaagatagcgatatttttaaaacttggGTTTTAgatattgaaattatttattgaaATAACGTATTTGATTAACGCAGGTTCTCCTGGAGAAGCTACTTTTTAAATATGTACTGTAAAACAACCaagaatatatata

Protein

Uniprot

Uniprot term	Description
Q8BG19	Protein O-mannosyl-transferase TMTC4 OS=Mus musculus OX=10090 GN=Tmtc4 PE=2 SV=1
Q5T4D3	Protein O-mannosyl-transferase TMTC4 OS=Homo sapiens OX=9606 GN=TMTC4 PE=1 SV=2
Q7K4B6	Protein O-mannosyl-transferase Tmtc3 OS=Drosophila melanogaster OX=7227 GN=Tmtc3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14559	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF08409	TMTC_DUF1736	Protein O-mannosyl-transferase TMTC, DUF1736	Family	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052346	Family	Protein O-mannosyl-transferase TMTC	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR013618	Domain	Protein O-mannosyl-transferase TMTC, DUF1736	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44227	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000030	Molecular Function	mannosyltransferase activity	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0035269	Biological Process	protein O-linked mannosylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan