Detailed information of ENSDTNP00000019531.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020913531.1, LOW QUALITY PROTEIN: intraflagellar transport protein 80 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q66HB3Intraflagellar transport protein 80 homolog OS=Rattus norvegicus OX=10116 GN=Ift80 PE=2 SV=1
Q8K057Intraflagellar transport protein 80 homolog OS=Mus musculus OX=10090 GN=Ift80 PE=1 SV=1
Q9P2H3Intraflagellar transport protein 80 homolog OS=Homo sapiens OX=9606 GN=IFT80 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00289Biotin_carb_NBiotin carboxylase, N-terminal domainDomainInterproscan
PF00364Biotin_lipoylBiotin-requiring enzymeDomainInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF02785Biotin_carb_CBiotin carboxylase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR011054Homologous_superfamilyRudiment single hybrid motifInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR011053Homologous_superfamilySingle hybrid motifInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR005481DomainBiotin carboxylase-like, N-terminal domainInterproscan
IPR011764DomainBiotin carboxylation domainInterproscan
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR000089DomainBiotin/lipoyl attachmentInterproscan
IPR001882Binding_siteBiotin-binding siteInterproscan
IPR005482DomainBiotin carboxylase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24098OUTER SEGMENT 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0030992Cellular Componentintraciliary transport particle BInterproscan
GO:0060271Biological Processcilium assemblyInterproscan

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