Gene detail

Detailed information of ENSDTNP00000020695.1 in Metridium senile

Genomic Location: :...
NR annotation: KXJ20127.1, ELAV-like protein 3 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000021515

GTCAGGGACAGTTGATCCTGCTATAGGATACTACGTGGACGAGTGAGTATAAGTCGGCGACTATATGTATGGGCGACTATATGGCATGTTGGCATGAAGTATATACCATCCTAAGCATGTGCTGAGAAGTGGATTTTTTTCGTTTGAACTTTTATCGTCTCTTTTTATTTTGGGAGATTTTTAAGCTAACAAAAGgACATTGACAAGAACctgaaaaaatattaatataatttacCAAGATGACAGCTTATGATTATAACCATGGTACGTCACTACCTAAAGTTGATGACGAAAACAGATGGCAACCCTACAATGCATCACAGGCACAGGAGACCCAGCCCTACAATGCATCCCAAGCACAGCCAACACAGCCGTATAATGCCACTGTAACACAGGCCACCCAACCTTTCAATGCATCTataacacaggcaacccaacctTATAGTGCAACAcaaccacaggcaacccaacctTATAGTGCAACAcaaccacaggcaacccaacctTATAGTGCAACACAACCACAGGAGACCCAACCTTATGGTGTAACACAACCACAAGGATCCCAAGCAGAAGAGACACCAACATCCAATAGTGGAGCTAAAACTAACCTCATTATCAATTATCTACCACAAAGCATGAATGACGAAAACTTCAAGAAACTATTTAGTGCCATAGGTCCTCTAAAAAATAGCAAAGTGTGCCGAAACAAGCAAACTGGCTGGAGCTTTGGGTATGGTTTTGTAGATTATTTCACAGAAGAAGATGCCCAGTCAGCCATCGACAAGCTCAATGGACATCAGATTGAAAACAAACGTCTTAAAGTAGCATTCTCACGACCTGATGCTGAAAACAACAAGGGTTCAAATGTGTACATACGTAATCTGCCACCCCTAATAAGTGAAATTCAGTTGAAAAAACACTTTGAGGCTTATGGTGGTGTAGTTAACTGTCGTGTCTTAATAGACAAAGCAACTGGGCTTTGTAACGGCAATGGCTTTGTGCTTTTCGGGAAGAAAAGCGAAGCTCAAGCTGCCATCGATGGAATGAATGCCAAAATGGTTGAAGGATGCAAAGAACCGTTGGCTGTCCGCTATGCTGATGACAACTCAACCAAATCGCGAACACCTATAAAGCCATTTGTTCCTGGCATCTTCAACACTCCTCAGTACCCAAGTCCAGGTCCTATACGTCCACCCATAAATAGATTCCAAGGTCGTTTTAACCCACTTGCAGCAGCAACACCGCAACATAACAAAGCATCTGATAGTGGTGGCTTCACCCTCTATATCTACAATGTAGGATTTCACCCTAATCAACAGAATCTAGTGGCACTGTTCTCTCAGTTTGGAGTTGTAAACAAAGTTGATATAATCTGGGACTGGCAGAAGAATCAGTGTAAAGGCTTTGCTTTCATTTCCATGGCGACACAAGAGGCAGCACAAATGGCTATCGACAATCTTAATGGGTATATGTTTGCTAATAGGCCTCTCCAGGTCTCATTTTATGCTGGAAAGAAACTTTAAAAGGagaacaacaagacaaaaaggGGTCTTTCTTGGTGTCACAAGATTTCTTGTTTAGAGTTCGGCATATTGCAGGGGTCTGTTTGTTGTAagttttgtattctttgttctACAGCACCTTTCGTAATTACACAACTACTGTCGTTCAGATGCCAACATGAAAAAGCAGTTTATACTACTGCCAATCAAAAATGATCAGTTGGtacctttgatattttgattgacggcagttaAGAAACGCCTTTTAAACATCTTTGACTGATCTTCGATGGCCGCATAGTTATGAAAGGTGCTTTAAATAGTGCATCAGGTGCCCTGCAATATTAAGAAAGAACCCCGCTTTTTTCCAAAGAAAATTCAACTGAATGGATGCACAAGACACTTGCACAAACTCACTAAATGTTTTGGAATCTAAGATGGGAAAATTTGTTATTTACTTGCAAATACTTCAGTCTAAATTTCAATATTGTTAAAGTCGATGGAAGAACATTGGTATTACTGGCATTGCATGTTTGCAAATACTGAACATTTCATATGCTCTTTGCATATCATGTGCTAAAACATGCCAATGGTACTAAGTGACGAACTTCATAAAGTTGATGGAGAAACATTTGTATTGCGGGCATTGTATGCAATCATATACAAACTGTCTTGTAAATGTTGACATGTCTTGTAAATGGTACTAACTTGATAAAGTTGATGGAGAAACATTTGTATTGTGGGCATTGTATGGTTCTAAATGTTGAAAAAGCATTTTAGTGCAAAACTATTTAATGTTACTTAGACAATGTTGCATTCAGAATATTATTGAAACAATCATCGGAATACTTGATCAATCAATGCATGTAAGTGACCATTAaattttgcaaacattttatGAAACATTTACAGATAATGTTTGTTCACTGCATGGAGGCAGTCATTTCTTAATGTTGGGCAAACCATTACATGCATTATTTTATGGTAACATTAATGGAAagtagcaagtaaactagtata

Protein

Uniprot

Uniprot term	Description
Q28GD4	ELAV-like protein 2 OS=Xenopus tropicalis OX=8364 GN=elavl2 PE=2 SV=2
Q5U259	ELAV-like protein 1-B OS=Xenopus laevis OX=8355 GN=elavl1-b PE=1 SV=1
A0A0R4IEW8	ELAV-like protein 4 OS=Danio rerio OX=7955 GN=elavl4 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR002343	Family	Paraneoplastic encephalomyelitis antigen	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR003954	Domain	RNA recognition motif domain, eukaryote	Interproscan
IPR050502	Family	Eukaryotic RNA-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48025	OS02G0815200 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan