Gene detail

Detailed information of ENSDTNP00000021933.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020913587.1, LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA-binding protein 2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000022845

GACACATGTCACGGGGTCACGTGACTTGTAACACCGGTTGCACGTGGACTTGGCTTTGGTCCTGAAAGTTCCCTACATTGCTCCAAGAATTTGTATTACTACTGCCCTTATTACAGCATACTGTTATCTAGCTTTCACTGGTTTCCTAGCGTGAATAGGTTGTGTTATGGACTTAAAAGGACACAATAACGCAGAAGGTCCCATCCCTAATATGCCAGTCATGGGTTACCCTGAAGGAGGTATGCATGAAGGAGGAATGCACCAAGAGTTTGCATATATGAACCCTGAAGATGACATACCAGATGAGGTAGAGCATGAACATAGAGATCTTGGCAGGGATAACAGGGGAGGTAAACCAAGGTTTAGAGGACCAAGAGGACGTCCAATGAAAGAAAATGATTATTCAATCAGGATTCTGATTCCCTGTAAAATGGTAGGAGCAGTGATTGGTACTAGTGGCAATAAAATCAAGAAAATTACTGAAGCAACTAATACTTCTATTGACATTCATCGCAAAGAAGACAGAAGAGAGGTAGACAAGttGGTCACAGTACGTGGTACCCCAGAGGATTGCAGCATTGCAAATATGCAAATCCATAAACTGATGCGAGATGAAACAGATGAATCTCTCAGGAGTAATGAGATTGAAATGAGACTAGTAATCCATGACAGCCATGCTGGAAGAATTATAGGGAGAAAAGGAAGTAACCTTAAAGGTATCATGGAAGAAACTGGTGCAACTTCTATAAAAGTTAGTGGTAATACTGGTGATAGAATGGGTCATTCAACCATGCTCAATGTAGGTGATCGTATAGTAAGCATTAAATGTCTAATCCATGATGGTTCAGATGGTTCAGAACCTGTCGATGAAGATCCAGCATTAGAAAACTGTAGAAGTGCTGAAAAGCTTATAAGTACAAAAGTCCATGATTGTTTGAAAAAAGATATGGATGACCTAATGagGTCTAGACAGATGCAACATCCCTTCTATCCCCAATCAATGCCTTGGAACCAGCAACCATATGGTAGTCAGATGCCTCCTGGTGTTGGAGAGATGCATGGAGgcggcggtggtggtggtggcggtggtaaTGTAATGCCCAATTACTCTCCCTATCATCAGTCTGGTCCATATCCACATGCACAGCAACCAATGCAGGCACAAGACAACCAAGTTGTTAGAGTACGTTTAGCCATTCCACAGAAATATGCAGGTGCAGTAATTGGTAGTAAGGGGTCGTTTTGCAACTACATGAAAACTCTCAGTCATGCCACCAAAGTCCATGTCTCTCCTGATGATAAGTCTGGTGAACGTTATGTAGAAATTATTGGTTCTCCTCTAGCACAATATTTTGCTCAGCACTGTGTATATTGCAAGCTTGCTGAACAAGGTTATAGTAATTCTGATGGTGAACTGAAACTACGTGTAGAAGTGTCTATACCAGCCAAAGGAGCATCTCGTGGTAACAAAGATACTAATATTATTGGTCGAATTATAGGAAAAGGAGGTCAAAATGTAAAAGGACTTGAACATGAAACTAGAACATATGTGAAGGTAGCAACAATAGAAGGTGAAGACGGTGAACCAAAAGAAGCAGTTGTCCAGATTGTAGGAAGTTTTGCTAGTAGCCAGCATGCTCAATTTCGAATCAATGAAATCGTTAAACTGTGTCAACAAGAAGGCAATGGTGGACCTAATGATGGACCTAATGATGGACCTAATGGAGGAATTCATCATCCAGGAAAGAGGCCACCGCCACCACACATGAGCTGAAAACAACCACAGGCATCAATAACCCCCTTTTGTCTTGCGAATCCTGGCAGCGTGTGTAATTATCAACATTTCGCTCCTACTGAATCATATAATCTTTTGATGTAATGAGAATCATTACTATCGAGTTTTATTTTGTATCTTCTTTTAGTCTTAACGACGGTATATTTTTGAGTGATACTCTTTGTTTGTCGTGTAGTAGTATCTCACCATTATTGAAAGCTTGGTAATCTAGAGATTCTACACTCGATAATAACTTGGCTTTTTTATATTAACTTGgtatacaaaaaatatttgtttagatTTATCAAATTTCAATGCTGGTTAAATTGTTATTTTCGACTTATAGTAGCATTGATAAGTTGATAAACTATTGCCTCGTGGTTGATTGAAGTCTTTATTAAGTGAATTTTTAACGCTAGAATTTTTGCTCAAATGTTTCACTTTTTATACTCCGATCATTAAAACGCTATATAGAAAGTGCGACGTTTGACTGACTATTATTCGCACTGCGGTTTTGCATTGATCTGCTTGTATTGTCTTATGTATTTGTTGCACCGTGGTTAGCTATGGTTTGCTTGCATCCCCATCTATCTTGTGTGCATACGTTAAGGTTGCTATACCTTGAAATTATCCATACGTTACCGGGGATGACATTAGTACTAGGTCACGAATAAATCATTCTGTCAAATGAGTATTTTTATCAATGAAATATAGACACAAAACAAGGGCCACTGGTAGAAGATTAGAAAATACAGCAGAATCGATAGTTTTCATAGCCCTAAAAATAAGCTGTCTTGTCCGATATTCCTGTGTCATTTACACCCAATGCCTGGTCTTGGGAGTGACTTCACAAGCTGCACTGACCTATTCGGATGATTACTGACTTGGTATATTCCCTGTTAATCAAATGTATGTTTTCTTCTTCCATTTGTCATTTGTGTTGGAAATATTCAGTTCCAACCTAAGAAATGAGAGCATTTATTCTAATGTTTGTGTCCT

Protein

Uniprot

Uniprot term	Description
P91277	Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6239 GN=hrpk-1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00013	KH_1	KH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17391	IGF2BP1; insulin-like growth factor 2 mRNA-binding protein 1	-	Spliceosome	ko03041	deepkoala