Gene detail

Detailed information of ENSDTNP00000022603.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_031572433.1, uncharacterized protein LOC116306499 [Actinia tenebrosa]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q748D8	D-alanine--D-alanine ligase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=ddl PE=3 SV=1
A5G8J7	D-alanine--D-alanine ligase OS=Geotalea uraniireducens (strain Rf4) OX=351605 GN=ddl PE=3 SV=1
A1AU58	D-alanine--D-alanine ligase OS=Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1) OX=338966 GN=ddl PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005446 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07478 all species →	Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013815 all species →	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR011095 all species →	Domain	D-alanine--D-alanine ligase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23132 all species →	D-ALANINE--D-ALANINE LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0008716 all species →	Molecular Function	D-alanine-D-alanine ligase activity	Interproscan
GO:0009252 all species →	Biological Process	peptidoglycan biosynthetic process	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01921	ddl; D-alanine-D-alanine ligase	EC:6.3.2.4	Peptidoglycan biosynthesis and degradation proteins	ko01011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.