Gene detail

Detailed information of ENSDTNP00000023273.1 in Metridium senile

Genomic Location: :...
NR annotation: KXJ24807.1, DNA mismatch repair protein Mlh3 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDTNT00000024329

ATGATTCGTGCTTTGGAGGAAGATGTCCGGTCACTGTTGCGATCAGGAATAGCTGTATCAAGTATAACACAATGTATCGATGAGTTAGTTGTAAACAGTTTGGATGCTGGTGCTACATGCATCACTATTCGCCTAGATATCCATGCACTGCGCCTTCAAGTCTCAGACAATGGAACTGGGATATCTAGAGATAATCTAAATGCATTAGGAGAGCGTTATTCTACGAGTAAATGTCACTCACTGACTGATCTAAATAACATCAAGTTTTATGGTTTTCGTGGCGAGGCTGTTGCAAGTATTCGCGACATTGCTGGTAGTGTAGAAATTGTAACGCGACATAAATCATCTTACAAGACATACTGTAAAACATTTCGGACTGGCCAAGCTGTGGAGATAACAGAATCATGTATTCCTCGTTCTAATGTTGGTACTACAGTGACTGTTTACGATGTGTTTGCATCACTTCCTGTTAGACGTAAACTCGTATCTGATGTACTAGAGGTGGAACGGATACGACAAAGACTCGCTAGTATTGCACTAATAAACCATGACGTCTCCTTCTCTTTGTATAATGATACTGCAGGTCAAAAATGCCTACAAACTCGCAAATGTCAGTCGATAGTCTCCACATTTTCGCAGCTATTTGGCAATCTTAAAGCAAAGAGCTTACATAAAGTCAGTTTGGAGTCAGCTGATGTGAAAGTGTGTGGTTATGTTGGTTTACAGACACATCACAGCAAAAACCTACAGTTTTTATACATCAATGGTCGATTATTGATGAAAACCAGAATACATAAGCTTGTCAATCAATTACTGCACAAGTCATTATTAATCAAAAACCCTGCTACAGTTAGTAATAATGTAGAGCAAGGAGTCAAGTCTCCTCCAAAACAAGCATGTGATAAATATGGTATATATGTACTGAACATAACATGTCCTTTGATGACCTATGACATCACTTTAGAGCCGTCTAAGACACTTGTAGAGTTTGAAGACTGGGACAAAGTTCTTGGTGTTATCAAGGGATGTATTGGGGCTTTCCTTGTAAAGAAGAACTTGATGTTAACAACAGACATGACTGAAGATGCTGAGGAATCTCAAGAATCCTGTGACAGTCAGATTGACTTAAGTATTTATGAATATCAGTCCGATACAACAGGATGTGATTATCCAATTGATGTTGCTAATATTAGGAAGAGCCTGCAATCATCAGTTGTCAGCAGAAGTGCAAAACACAACAGTAATATATCAAAGTCAAGTGGAGATAGCATTGAACTTACAGACAAAACAGAGATGCTACACATGGAAAAAATTGTCAAGACGTCATTAAATGATTCTAGCTGTCATCAGCAATGTACAAGAGATGATGTCACCATCACTGGATCAACACTTTCATCACAATATCCAGGAAATAAGgaaccattatcattacttgATAAATCCCTTAGAAATACCAGTAAACCACATGGTAAATGTTTTACATCACCTAATCCTATAACCCTGAAAACACGCAGATCTCTAAAAAGAGTACATTTCAGTAGCACCAAGAAATCCATTGATATTACAACATATGGTGACCATGGACTGACAACAAGAACAGATATAGATATAGCTCCATTAAATGTCttagacaacaacaacaacaatagcaacagcaacaacaatagcaacagcaacaacaatagcaacaacaacaacaatagcaacagcaacaataatcACAGTGATGTCAATGAACTGGGATCTACTGAGAACATTTCGATGAGAGAACATAGCTTGAATGATGACATATCAGAAATCCTTCTTGATAATGTAACAATAACGGTTGATAAATGTATCAGTGGGTCCAATGAATCACATGCTAGAGTTGACAATGACGTCATCCTGTCAATAACGTCACATGAAAATGATGACATCAGGGATGACAAACTGAATAAGCTGGATGATGAACGAATCCCTATACCACAGGAAGAGATGACACTATCACCAGACAGAAATGATGCTGATAGAACAGCCTTAGATGAATGTCCATCCACAGCTAATGACTGGCAAATCACATATGACAGTAATCTAAACAAGACCATATACTATAATATCCGTACCGGTAATACAGAGTTTGATTGTCCTTATAGTGATAATACTAGTCACAATACTAGTCAAGACACTGCTAGGAATAATACTAGTCTCAATACTAGTACAACTACAGTACCATTGGTATGTGCACCTCATGTTTCGTTTGATTGTACACCATGGCTACCACGTGATGATAGACCTAGAAGAACATCCTATCAAGAGCAATCCTTTACACCAACAAGGACCTCCCTGTACAAAGCTGTCTTCCCTTATCGTTTTACTAAAGACATGGTGAAAGACCTTCATGTCATACAACAAGTCGATAACAAGTTTATTGTTTGTCAAGTACGACAGGAACAATGTGCAGATCTGTTTATCACGACGAGTCAGTGTGATGGTTCTCTCCCATGTCTCAAATCCTCCCCTGTCTCCCCTCCCATCGAACTAGAGTTTACACCCCATGATCTTCTACTCATCAAGCGTTTTCGTAGTGACCTGGGACGAGTCGGTGTCAAGTTTGTGATTGGTTGTAATTCAGAGTCGATTGAGCCTCGGAACATCATCGTACACGAGTTGCCGTGTGTGTTCGTAGAACGAGAGGTTTCCGAGACCCGACGACGTAGACCATCAGTAGCTGTAGTTATCGTTAAGGTGGGTGATCGGGTGGGTtgtcctactaattggggagacagactcactacctctacgttaaatattttggctcACATTTATGCGCAAAAATTCCAAAAAATTTGTCAAGTTCCGTCAACATGTTGTTCTAGCGTGTGGTCACTAACGTGTTTTTTGTGGTTTTCTTTGCAGCATCTAAAGCAGACAAATGGCGTTTCACCTGCTATTCCTAAGACTATTTTACGTGTTCTTAGTTCGCAAGCTTGTCATGGTGCTATCAAGTTTGGTGATTCTCTTACCATACAGGATTGTGAACAATTGATACAACAACTGTCGTCTTGTGATCTACCCTTTCAGTGTGCACATGGCAGGTACCAACATCCCTTTCTTACTTTGTGTATTTCTTgcattttttctttcattccaAATAACTTTTGA

Transcript

ENSDTNT00000024329

Protein

Uniprot

Uniprot term	Description
Q9UHC1	DNA mismatch repair protein Mlh3 OS=Homo sapiens OX=9606 GN=MLH3 PE=1 SV=3
F4JN26	DNA mismatch repair protein MLH3 OS=Arabidopsis thaliana OX=3702 GN=MLH3 PE=2 SV=2
B9K7B8	DNA mismatch repair protein MutL OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E) OX=309803 GN=mutL PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02518	HATPase_c	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF01119	DNA_mis_repair	DNA mismatch repair protein, C-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR042120	Homologous_superfamily	MutL, C-terminal domain, dimerisation subdomain	Interproscan
IPR038973	Family	DNA mismatch repair protein MutL/Mlh/Pms-like	Interproscan
IPR003594	Domain	Histidine kinase/HSP90-like ATPase	Interproscan
IPR037198	Homologous_superfamily	MutL, C-terminal domain superfamily	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR013507	Domain	DNA mismatch repair protein, S5 domain 2-like	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR002099	Family	DNA mismatch repair protein MutL/Mlh/PMS	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10073	DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0032300	Cellular Component	mismatch repair complex	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0030983	Molecular Function	mismatched DNA binding	Interproscan