Gene detail

Detailed information of ENSDTNP00000023959.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_020895792.1, uncharacterized protein LOC110234745 isoform X2 [Exaiptasia diaphana]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

Transcript

ENSDTNT00000025068

GTTTTAGTGAGTGATCTTGTGATATTCGATACATCTGCTATCCTATCCCCGGCCCCGATAGATGTCAATCATGTAGCGTCCTCCCACCCAATGGGATTATTTGAAGACAAATTGTAGCCAATCACGTGAGGGATATTAGCAACGAACCAATGAGAATCGTGAAAGGAAACTTCTAAGGGGGTGGACCATAATTTGGGATGTGTTCTTTTGCAATCGCTTCGCCTTCgagagggaggggagaaagGTAAAAAATGGCCACTCCAGCGTCGCACAAGGAGAGTGAGGCAGAACTTTTTAACCTGCTGAAATCAGCGAACCTTCTCGACTACTACAACAACTTCATTGAACAAGGAGGAGATGACATCCACCAGTTTTGCGATGCAAGCGAGGAAGAATTCAAAGAGATGGTTAGTTTGGTCGGGATGGCGGCTAAACCACTACATGTGCGAAGGCTGCAGAAATGTTTGGTCGAATGGAAAGCTAAGAAAGCACGTCAAGGGGACCAAACCCCGGAGAAATCTAGTTcctggattgatggatggacaCCAAACCAATCACCTAATGTAACTAGAACAACAGCAACTATAGTAACGACGCCAACTATCATAACTCCATCACTAAAGCGAAAATCATCAAGTAGTTCTTCCGAAAAAGGGACGCCAGAGAAACGTGTAGTTGAGCTCAAACTCCCGCCAATGGATGTGATCATTGACTGGGAAAAGCTTGATCCTGAACGACAGCAGCTAATTCGAGAGCACTCACGAATCTATGGCCGTGATGACAAAAAGAGAAAAAGTATGTCACTGAATTGCCATGAGCAAATGATAAATGAGGCAGCCGCTCAACTTTGTCTTCGAGACCCGACTCTCCTCGTTCGTCGAGATGAGCTCTTTACGATGGCGAGGCGCGTAGTAAGAGAGAGTGGTTTTACCTACGTGCATGGTCATTCTAGATCTAAATATCTTGGGAGTGCACcagaaattgatgatgatggcaGCAAGAAACCTCAATTGTCTTTGGtaaataagtacaaaagaaTAGAAAGGCTGACTGAAATAGATGATATACTAATAAAGAATAAGGGTCTTCAAGATGACCTTTCAAGGAAGATTGAGGAATCTCGAGCGATTATGAATACTGCTCAGGTATTTGATGGTGTTTTAGTATCAGAGCTGCAGCAAGAACTTGTCAGGATCCAAAATGACCAAGTCTCCCTTCAGATAGAACAGAAAGACTTGCGTAAAAAGCAAAGACGGTCAGATAAATACTATAGCAACAAAGAGACAAGAGGTTCAGAATCTGGCAATCCTGATGAACAGGACGACACTGATGGTGTCTCCAATGCAGATGAcgATGTGGCTTTTGCTGAGGAGGGACAAATGCAAGATACATCCCAAAGTCATCGTCACCATGTACAAGAACAGCCTGTTGCTGTAGTTACTGAAATGCTTCAACATGGAGCAGGTAATGTACAGGCTACTACAGCAGTTTCTGAAGATGAGTCTTCAGTCCGTGCACTTTATGGTTCCTTCCTCCCTAACCAACTAAATGATGAACAGCAAGCTGCTGCAGCAGCCGTGGCAGCAGCTAATATTGCATCTTTCCAAGCCGCTGCTGCTAGAGGTGCATACACTGTTGGAAATACCGCCATTACTGACCCAACCATAAATGCCCTTCTAAGCCTATCAGCTAAGGATAAGACTATGGTCCACACTATGGATGGCGTGGGAATGAGTGAAcacacagacacacagacatCTCATGCGGCTGTATTCACCTCACCAAGTATCACAGTTGTCATGCCAACAGGCCACACCCTTCCAGGAAATGTACAGGCATGGAGATAAAGTTTCACAATATTTAAATGTTACAATCGATATGATTTGTGTGATATAACATTGTGTCAAATAACTGTAGTAAAAGTATCAGAGGAACTATCTACTGCTTTGTCATCAAAGTGTCCAGGGGACAAGAATGTTATGATGGCTATCAGTTTGTCAACTGTATTATTACATTTCTGTAATTTGAGtgattttgtaaaaaataaatatatcaaagtatttctttttaattctGTATATATCTCTTGAAAATAGTTGAACTTTATTTTTATGTCTTCAAAATGACCAACAAAACATTTGAGTGATATGTGTTCTCAATAGTTAAGATAATGATTATTAGAGTAAATATGAAACCTTGTAGGTGATTTTGATCAGAAATAAACTTCCTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62722	NGFI-A-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Nab1 PE=2 SV=2
Q61122	NGFI-A-binding protein 1 OS=Mus musculus OX=10090 GN=Nab1 PE=1 SV=2
O35589	NGFI-A-binding protein 1 OS=Mesocricetus auratus OX=10036 GN=NAB1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009825 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04904 all species →	NCD1	NAB conserved region 1 (NCD1)	Domain	Interproscan
PF04905 all species →	NCD2	NAB conserved region 2 (NCD2)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038398 all species →	Homologous_superfamily	NAB co-repressor domain 2 superfamily	Interproscan
IPR006988 all species →	Domain	Nab, N-terminal	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR039040 all species →	Family	NAB family	Interproscan
IPR006989 all species →	Domain	NAB co-repressor, domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12623 all species →	NGFI-A BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134 all species →	Molecular Function	transcription factor binding	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDTNP00000023959.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.