Gene detail

Detailed information of ENSDTNP00000025164.1 in Metridium senile

Genomic Location: :...
NR annotation: XP_020909213.1, serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSDTNT00000026369

AAATCTGTAATAGGGATTACAAGGAAACAATATGTCATGGGCAGAGACACTGAAGAGATATGTGGACaggaaaaagaaggaaaaagCAGAAGGAAAGACTGAAGGGGCTGCTGAAGGAGGTAGCTCTCAAGATGAATTAACAGAGACAGAattattttccaaatattatacAGAATGGAAGGATCAGTCAAAAAGTGAAGATTCAACTTTTAACACAATACCAAAGTTCTATTACAAGCTTCCATCAGAAGATGAAATCTTACAACAGAAGTTAAGAGAGGAATCAAGAGCTGTGTTCTTACAGAGAAAGAGTAGAGAACTATTAGATAATGATGAATTACAGAATCTCTGGTTCTTATTAGATAAGCATCACACTCCACCAGTCGTAGCAGATGAACAGATGATTAGCTATGTGGATTTCCTTAAAGTAGCTTCTCAAGCTGGTACCAAATGCAGGCCATTCTTTAGAGCTACAGTGTTTAGTAAGCTTTATCAAAAAGATCCTTTTGGAAGGATTTCAATTATGCAGTTCTTCAACTATGTTATGAGAAAAGTATGGCTTCACCAGACAAGAATAGGGTTAAGTCTTTATGATGTAGCTGGACAAGGATACCTGAAAGAGTCTGATTTAGAGAATTACATACTGGAGTTGATACCCACTCTACCTCAGCTTGATGGCTTAGAGAAGTCTTTCTACTCATTTTATGTCTGTACAGCAGTAAGGAAGTTTTTCTTCTTTCTAGATCCTCTCAGAACTGgtaaaataaagatacaagaCATTCTTGCCTGTAGTTTCCTGGATGATCTTCTTGAGCTAAGAGATGAGGATTTATCGAAGGAACAACAAGATGCAAACTGGTTTTCTGCCCCATCAGCACTCAGAGTATATGGTCAATACCTCAACTTGGATACTGATCATAATGGAATGCTTAGCAAGGAAGAACTGTCTAGGTATGGATCTGGTACGTTGACCAAAGTCTTTATTGATAGAGTATTCCAGGAATGTTTGACATACGATGGTGAAATGGACTATAAAACATATCTAGACTTTGTGCTTGCTTTGGAAAACAGAAAAGAACCACAGGCTCTCCAGTATCTTTTCAGAATACTTGATGTACAAGGAGTTGGCTATTTAAACATCTTCTCGTTCAACTTCTTCTTTAGAGCTATACAAGAAGACATGGTCAAACATGGTCATGAGCCTGTCAAGTTTCTAGATATAAAGGATGAAATATTTGACATGGTGAAACCAAAGGACCCTTACAAAATCACCCTACAAGATCTACTGAGCAGCTCACAAGGTGAAACCGTTACAAGCATACTTATAGATCTGAATGGTTTCTGGACATATGAAAATAGAGAACTGTTAGTCCAAGAACCAAGTGTAGATGAGTAACTCTTGACTTGGTGTATGTACAATGTAATAGactagttaataataataaaaagttattattaatagACTACACAATGTAATAGCCGCAGATCAGACCAACACATATCCTTAATGGACTTGTTTACAAGCTTACTAATAGATCTCAATAGTTTCTGGACATATGAAGATAGAGAACTGTTAGTCCAGTTACCTTTTGACTTGATGTATATACAGTAAAATAGACACATGATTGTTATCAAGTTATAGATCACTTGGGAATTTAAGGAAGAATATagctgagaagcactccactCTTATCCCCTTAAAATCCCAGCATGCTCTAAATTTAATCGATAGATCACGCTGCCTCATTACTGAgtcaaaacattgtttgcaatatTAGAGTGTTGACTTTTGGCGTTTGACagtaatttttaaaataggtgtataactatTGTATAAATGTGAGTGTTGTATAAATActgatgtaaatatatataaagttaGTAGAGTActgtaattaaaataaaaactgtaGAAAAACAAGACAAGTGTTATAAAAATGAATGATATTGTATAAAACATTGATACTGATAATGTACACTGGTAGTCTAAACAGTGGCAATAACGCCATTCAATGTTGGGCTTCCAAGCCAAAATCTTTCATATCAAATACATATTACAAAATAGCCCTCTTCATATGTtggcaggggcggatccaggggaggggaattgggtgaatactattttcactatatcatatttttggttctcaattttaataggcaatcaaaaaagatgttcacacagcaaatttgacCGGAATTcttcaaatagcagctgagatatagccacttgaatatataatttccccatacaaatcactgtattttGGCTCCATTCCAAACTTTTGGAACG

Protein

Uniprot

Uniprot term	Description
Q803V3	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Danio rerio OX=7955 GN=ppp2r3c PE=2 SV=1
Q969Q6	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens OX=9606 GN=PPP2R3C PE=1 SV=1
Q5E9G1	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus OX=9913 GN=PPP2R3C PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17958	EF-hand_13	EF-hand domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR039865	Family	Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma	Interproscan
IPR041534	Domain	PP2A regulatory subunit B'', EF-hand domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12085	SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B'' SUBUNIT GAMMA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0001782	Biological Process	B cell homeostasis	Interproscan
GO:0005813	Cellular Component	centrosome	Interproscan
GO:0005819	Cellular Component	spindle	Interproscan
GO:0030865	Biological Process	cortical cytoskeleton organization	Interproscan
GO:0035303	Biological Process	regulation of dephosphorylation	Interproscan
GO:0043029	Biological Process	T cell homeostasis	Interproscan
GO:0045579	Biological Process	positive regulation of B cell differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11583	PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''	-	Chromosome and associated proteins	ko03036	deepkoala