Gene detail

Detailed information of ENSDTNP00000026301.1 in Metridium senile

Genomic Location: :...
NR annotation: PFX16146.1, putative RNA-directed DNA polymerase from transposon X-element [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSDTNT00000027569

GCAGATGTAATATTAAGTGTTGTAACGGAAACTGACTTTTcgttcatttcaatcgataatAATGTCATCGCAATCTCGGGCTATAACGTGATTCGCCGTGATCGTTATGGAGCTGAACATGGAGGAGTATGTATTTATATCAAAGACTCAATTCAGTTTAAACTTCTTGAAGATCTTATGATCGATCAGTTTGAAGTTTTATGGACTCAAATTCGCCCAACACGTCTCCCCAGAGGAATTACTAGTATTGTCATCGGCACTTTATATCATCCACCAAGCGCGACCGACACGCCTATGCTTGAGTACCTCTACAATTGTTTATCGGCTATTGAAGTTCGTTACCATGGTTGCGGAATTATTCTGCTTGGAGATTTTAACAACAGCTTATTCAAGAAATGTTCTCGCCTGACCAACAGCTTCAAACTGaaacaaattgttcattttccaaCCCGTGGCGCCAACACCTTGGATCCTGTCTTTACAAACTTAAAGGAATTTTACGACTCTCCTATCCAACGCCCCGCCTTTGGTCTGTCTGATCATTATTTTATTGAAGTTCAGCCTTTGAAGCGCATTAATCGACATAATACCAAGACAAAAATTACGTCGAGAGACCTACGACCGACAAAACGATTAGGCATGCGCACctatttagaggaagtaaacaTCAAATCAATGATTGACGGTAACGACACGTGCGAAGATAAAGTGGAAATGTTAGAGTTCATTGTTAACACCGGTATAAACATTCTCCTTCCCCTAAAGTCCAAGACCATCCACCCTAATGAGCCTGCCTGGGTAAACCGGAAGTTGAAACATCTCATCTCAAATAAAGCACTAGCTAATGGGGAGCAAGCCGAATATCGAGCCTTGAGGAACCGTGTGAATCGGGAAAGAAAATCATGTCGTGCCAAATTTTACGAATCCAAGGTTGAACACTTGAAGGAGAGTAAGCCAGCTAATTGCTGGAGCGAAGTTAAGAAACTAAGTGGAATGTCAACATCAAAAGACACCGATCCGTCATCATTATATCAACACATCGACTGTGCACGTGATGATCTGGATTCCTCGTCCAGCTTGGAAAATACAGCTAATACCATCAACAATGCCTTTTTGTCTGTGATGAGTGAGTTCGAGCCTCTCCAGCCTAACACCGCTGAACAAACCACCGATGAAGCTCCTCTATTTCAAGTATCTGAATCATCTGTGTTTAAGAAGCTGTCTTCACTAAACCCATCTAAAGCAACCGGCCCCGATGGCATTCCTGCATGGCTCCTAAAAGAAAATGCCGACTTATTTGCCGAACCAATCGCGGATACAATCAACCAATCTTTCAAGGAAGCTAAACTCCCTCAGTCTTGGAAAGACGCCGACATCGTACCCGTGCCTAAACAAAAACCAATCAAAGACGTGAATAAACACCTCCGACCAATATCACTGACTCCTGTGTTGTCCAAGATTGCTGAGGACTACATTGTGGAATACATTAAACCTGCCATTCTAGCCAAAGTAGATGAACATCAATACGGAACGGTCCCAAGATCCAACACTACCATTGCATTAATCAGCATGATTCATACATGGCTGAGTCAAACTGACGGGAATGGTGCTACTGTTCGTGCAGTCTTATTCGACTTTCGTAAGGCCTTCGACCTCATCGACCACAAGATCTTAATGCAAAAACTCACGACTTTTGGCCTACCTTGCAGTATTGTCGCCTGGGTGAAAGACTTTCTAACTGGCCGTAGACAACGCGTCAAGCTTTCTCAGGATTGTCACTCTGAATGGGGAGATATTCCATCTGGAGTCCCCCAAGGGACTAAGTTGGGTCCGTGTCTATTTACGATTATGATTAACGACCTATCTATCGGAGGTGTTTCATTGTGGAAGTACGTAGACGATACAACTATCTCAGAGACAGTACTAAAGAACCACTCTAGCAAGATCCAGCAGTACGTTGACGATCTGTCCAATCAAGTGTCTTTTGACAGATCCCAAAGGGACTTTGTCCCTATAAAGGTCAACAATAAGGTTAAGAACATTGACTGTGTAAAGAAAACCAAAATTCTAGGCGTAACCTTGTCTAGTGATCTCAAGTGGAACGACCATGTGTCCGAAGTCACTAAGAAAGTTAACAAGCGTTTGTACTTCCTGAGCCAACTGAAACGAGCTCAAGTAAAACCTAAAGATCTTACCACCTTCTATATCACATGTATAAGATCTGTGATGGAATACGCATGTGCATTATTTCATAATAGTCTACCACAATACTTATCTAACGACTTGGAGTACTGTCAGAAACGAGCTTTGCGAATAATATTCCCATATTTAGGATATGACCAAGCTCTGGAGGAAACAGGCCTAACATCCTTGCACGAGAGGCGAGAAGTAATCACTTCAAAGTTATTCAACGACGCATGTAAACCTGGACATAAACTAAACCaacttttaccaaaaaaattcaCGTGTCCTTACAATTTTAGAAACACACGAACATTCGATAACGCTAGAACCTCAACAAAAAGAACCCAGTTCAGCTTCATAAATTTTAATTCAAGTAATTTTTACACAAAGTGA

Transcript

ENSDTNT00000027569

Protein

Uniprot

Uniprot term	Description
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
P21329	RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
P21328	RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09004	ALKBH8_N	Alkylated DNA repair protein alkB homolog 8, N-terminal	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015095	Domain	Alkylated DNA repair protein AlkB, homologue 8, N-terminal	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47510	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10848	ERCC4, XPF; DNA excision repair protein ERCC-4	EC:3.1.-.-	DNA repair and recombination proteins	ko03400	deepkoala