Gene detail

Detailed information of ENSDTNP00000030531.1 in Metridium senile

Genomic Location: not available for this species
NR annotation: XP_031572316.1, uncharacterized protein LOC116306403 [Actinia tenebrosa]
Species Metridium senile · all data for this species · gene families

Sequence

CDS

ENSDTNT00000031899

acatgcgtcctaaattcgaAAAATGGCTATTGTCTAAAAACGTTCACCAAGAAATTCAAATTACCACAAATGGTTCGAGTTGTTTCAGGTATTTACGACATGTTGGACGAAATAAGCCTCTCTCGTGAAGAAATCTTAACACTACATAGCTTAAAAAGGTACGAAACAGTAAAAGCAACGAGTAACGAAGGACATACCTTTTATCTACCGTTAAATATCACAAGTAAAGTTGCGATTATAGCAAATCGCATGACTCCGCTTCGTCGAACGTCGTATGAAGATGTGGAAACATTCGCTGATGACTTTCCACCGCTGGTAGCTTCGATAGAGACGCACAAAGTGCTTGAGATTGAGGAGGGAGATATTTTGAAACCGATTCAAACATGGATTACAAGTCCAAGAGAGGGTTCTCTGCAATGTTCAATCTTGAACAAACCATTAGCTGACGATATATTTATGCCACTGTCATACCGTGCGAAGTTCAAAACACTCGAGACTACAAACTATAACGCGTTATTCCTCAAAGAAGTCGTCACCAACTATCCTTTTCCGATACAAGTCAGGTTTCTAGAAAACAGAGTTATAATACAGAAGCATGATATCAATTCGGGTCGCAAAACGAGTATGGATACACTAGGAGTGATTACACTTCATGCACTGAGTGACATATCGTTGGTCGTAGCCACATCGACTGATCCAGGCACAGGAAATGTGCAATCTCTTCTGACTTTGCCTCAAGATCTAGACGTCACTATCGTTCCTTATCCAGGCTCACCAAAAcgacagaagaagaaaaacagatTGCTTGAATTAGACTTTTGTGACTCAAACTTTGTGTATGGATCGACTATAATCGATGAAAGACCAATGGACGATGCACAAGTAAATGGTTATGAGGATGTTCTACCTCGCCTGTTTCCAAGGAAACGACCAGGTGCTCCTTCCCGTTTTCATCACAGAAGCTTTCCTGCTGAATCTGAATCGAAGACGGATCACCATGACGACAATGAAGACAGTCGCCAAGACAACAGTTGTCAAGGCAATAGTAGCTATGGTGATGCTGCTGGTTACAATGGTGCTGGAACTGAcagtgatggtgacgatgatgttgacggtgatattggtaatgatggtaatgatgatggtaatgatgatgatgatggtaatgatggtgatggtaatgatgatgatcgtgataatggtggtggtagtgacgATGaatgtaataatgACTATGAAAATCCCGGAGGACATCTGCGTGTTATCCAAGGCGAAAAAACAACAAGTATAAGCGTCAATGTCCCAGATGACTTTGCCATGCATATCAACAGAGAACCAGCGCCAATCCCCCCTCACTATAACACACTTCCAGCCTCTTTTTCCAAGAAGTCCAGCTCAAAAGATTACAGGAAAGCAAGCCTTAAGAAGCTAGCAAAATTCGCGCGCAAAAGTGTTAAACGAGCCCAATCTGATAAAAGCGAGTATGCGTACGTCGACTCGATACCTATCCCTAGCAAAAGCGCCGATAAAATGACTGAAATCGGAAAAATCTGGGATTTGCGGAAAGAGGTTAATGAGAAATCACGTGTTGAAATCCAAAGCCCACGTGAACGGCTGCGAACGCTGGACGTTGACCAAGTCTCGGAGTTGCTTCAAACGTTGAGTTTACATCGTTATGTGAGACACTTTAAAGAAGCGAAAATTGATGGAAGCCTGTTCGTTGACTTGAACGATCAAATGATGATTGAACTCGAGTCCAAGAAGTTCTCGCACGCTACACCGAGCAGTGACAACGAGAAGCCGGTATGGATGAAGCCAAAGCTTAAACCAGTCAGTCGTGGTGGGACACCGAGATCCCTTGCTGATTTACTCCAGGCCGACCAAAACAGAACTGATGTCAAAGAAGATGATACCAACAACAATATTCACGCGCCAAAAAGCACGCACACGTCCAGTGAAAGTCATGGCGCGAAAACTGGATCCACGTCACCGGTAAACAAAACCGCATACGCGTCAAGTTATAGTAATGGCGGAAAAACCGAATCAACCAATAAGAGTGCACAaaacaacacaggaagcccaactagAAAAGTGCAATCTAATGTTGACATGACCCCATCAACTGCTTCGCCAGTGAGCAACGGAAGTATCGTGAACGGGGCGAGCTTTGCTGAGCGAAAGAGAACTCTAGAACGGGAAAAGCACTCGGTAACCGGTTTTACAACTGAGAAACCACCGTCTAGGTCGCCAATTGTAGTCTCAAGTAAAAAAGTTGAACAAACGCCAAAGGAGCAACAAACGAGAAAGACTTCGTCTGAACGCATCGTTCTAAGTTCGCCGGGGAATAGTAATCCAAATAGTCCTACAAAAAAAACTCCCGTTTACTGGAAAGATAGAGCAAAATTAGAGAACTCTAACGAGAATCAAATAACGCAGAAATCTGTTAGTGATTCAAACGAGACGAGCAGTACACCAATGGGTTCTGTTATTAAAGCTACACAGGTGAAGAACCAAGAGGCAGTGATACAGGCTACTCCAGTACAAACTAGATCAGCTCCTAATCGATTCCAACAAAACGCTTCTACTCCTATTAATGCCGTACCAGTTAAAACTACTTCAAATCGAAATCACCAGAATACTGGATATCAAAATAACCGGATTACGACCAcgtCTAACATGAATGTGAAATCATCGAATAATTCAGCACCTATAAACGGACAAAATAGTAACACTACCCCATCAACAAAGGCTAATACGATAGCTAAAACAGGAACTAATACAACGAATATCGTCGCCAAAACAACGAGTAATCAAGATAGTAAATCAAAGTCGAAAATGTGGAGagagaaattacaagttaacGAACCCCCTCTCCCACAGGCAGACATTGAACCAGACACAGGAGTCCAGGAGGAGGAGGATACCGGAGTTCGCCATCCCACAATGCCTTTCAGGATGCCACAGGGGAATAGCGGAGAGGTCGATTCACTAAGACAGGAGCTTGAAAAGTTAAAAACAGAGCATGAAAGCGTTGTAGGGATGTACAAGACAAACATCGCTAAACTGAAAGATGAACTGGAGGAAATGAAAATGATGAGTGCTTTAGCAGCTGAAGGAGGAATTGTAGCAATACCTTCCCCACCACCACCCCCTGGAGGTAGTCCTgcaccaccacctccaccaccaccaccccctgGAGGTAccccaccccctccccctccaggAGGACTTTCAAGGGGTCTTGTAAAACCAAGGAAAGGTGTTATCAAGCCTGGTGTGGAGATGAGACCGTTGTTCTGGCAGAGAATATTGGTAGATGGTGATTTCGCTTTAATATTTCTCTTTCAATTCCTCAGGCTTTTTGGCAggaaaataaacaaacgaaagcGACTTAACAAACGTAAATCTCTACACGAAGATGCTGTCTTCAGTCGTGTTGAAGGCAAGAACGTGATCAAAGTGCTCGATAACGGTCGATCACAAACCATTGGTATCATAATGACAAGCCTTAACTGCCAACTAGATGACGTCAAAGATGCTATATATAAAATGGACACCAACACGATAGACATGGACGGTCTGAAGGCGTTATACCATATTCGACCCAAAGCAGACGAAATCGAGGTGATAACTAAAGAAGTACAAGACCATCCTAATGCATCTTTAGACAAACCGGAAGAGTTCTTGATGCGACTGCACAAGATGGATCATTTCTCTGAACGACTAGAGTGTTGGCTGTATAAAGACCGCTTTACCGAGACCGTTTATGATGTCGCGCGTCGACTGGGTGCTATCAGTGAAGCAAACGCACTAGTACGCACGAGCCAAGAAATCCAGTTCGTTCTGTCTCTGGTACTAGCCTTTGGTAATTACATGAACGGTGCCACTGCGCGTGGTCAAGCTGATGGCTTCCAACTCAACGCACTACAAAAACTAAAGGATATCAAGACGCAGGACAACACTATGAATTTACTACAGTACATTGTGCAGTACTATTGTAAAGCGCGTGAGGTTAAGGGGCCTGGGGCTGAATACACGTTACCAGATCCCTACATCGTACTCGCTGGTTCCCAGTCCTCCTTCAAAGAAATCCGAGAAAaCATGGCTCAAGGGAAAATCACACTAGCAACAGCCAAGGCAAAGGTACAGGATACTGATGAAGAGTTGTCAAGATTGTCAGAGAAAATGGAGACAGCAGCTGGAGAATTCAAGAAAATAACTGAATACTTTATATTCAAAGGAGAAGGCGaggagGTTGGACCTCCATTGTTTTTTGGTATTTGGGGACATTTCTTGGAAGACTTCAAGAACTATTGGAAGGCTGAAGTGTTACAGATCGCCAAGAGAAAGTTCAACAAAACCGAGCACTTACAACAGGTACTTACATCCAAAGAAACATTTACTTACATTAAACGTACGCAAGCAATACAACATACCTTGCGTCTGATTACGCAGGTTACGTGTAAACGCAACAAAACGCATGCATATTCCATAGAATTTCAAAGCCGCGAGTAA

Transcript

ENSDTNT00000031899

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NZ56	Formin-2 OS=Homo sapiens OX=9606 GN=FMN2 PE=1 SV=4
Q9JL04	Formin-2 OS=Mus musculus OX=10090 GN=Fmn2 PE=1 SV=2
Q05858	Formin OS=Gallus gallus OX=9031 GN=LD PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002395 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12736 all species →	CABIT	Cell-cycle sustaining, positive selection,	Domain	Interproscan
PF07647 all species →	SAM_2	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF02181 all species →	FH2	Formin Homology 2 Domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042201 all species →	Homologous_superfamily	Formin, FH2 domain superfamily	Interproscan
IPR025946 all species →	Domain	CABIT domain	Interproscan
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR015425 all species →	Domain	Formin, FH2 domain	Interproscan
IPR001660 all species →	Domain	Sterile alpha motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45920 all species →	FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0030866 all species →	Biological Process	cortical actin cytoskeleton organization	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSDTNP00000030531.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.